Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpl9

Gene Name Gene ID Reads Annotation
rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]










Genes with expression patterns similar to rpl9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
2. rps29 ENSDARG00000041232 71334 1.65 - - 0.848 - - - 0.802 - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
3. casq2 ENSDARG00000008982 21802 1.628 - - - - - 0.818 0.810 - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
4. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 1.6 0.835 - - - - - - - 0.765 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
5. COL2A1 COL2A1 18161 1.595 - - - - - 0.779 0.816 - -
6. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.594 - - 0.795 - 0.799 - - - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
7. tnnt3b ENSDARG00000068457 101827 1.585 0.773 - - - - - 0.812 - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
8. rpl26 ENSDARG00000102317 154515 1.573 - - 0.820 - - - 0.753 - - ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
9. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.57 - 0.762 - - - - 0.808 - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
10. dnaja2 ENSDARG00000104066 11946 1.565 - - 0.863 0.702 - - - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
11. rpl5b ENSDARG00000015862, ENSDARG00000109661 79810 1.546 0.821 - - 0.725 - - - - - ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
12. rpl31 ENSDARG00000053365 55475 1.538 0.803 - - - - - - 0.735 - ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
13. RPL37A RPL37A 62256 1.532 - - - 0.761 0.771 - - - -
14. si:ch211-166a6.5 ENSDARG00000079745 11111 1.525 - - 0.704 - - - 0.821 - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
15. rps26l ENSDARG00000030408 146322 1.515 0.783 - - 0.732 - - - - - ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
16. gnb4b ENSDARG00000115383 7457 1.511 - - 0.762 - 0.749 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
17. cav3 ENSDARG00000024141 14906 1.504 0.762 - - - - 0.742 - - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
18. si:ch1073-286c18.5 ENSDARG00000098567 7391 1.487 - - 0.738 - - 0.749 - - - si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
19. eif3f ENSDARG00000077533 24387 1.474 - - - 0.736 0.738 - - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
20. rpl18a ENSDARG00000025073 170983 1.474 - 0.756 - - - - 0.718 - - ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
21. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 1.468 - - 0.713 0.755 - - - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
22. atp5mf ENSDARG00000037867 11052 0.933 - - - - - 0.933 - - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
23. rpl8 ENSDARG00000014867 168995 0.915 0.915 - - - - - - - - ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
24. bzw2 ENSDARG00000035918 1502 0.912 - - - - - 0.912 - - - basic leucine zipper and W2 domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-746]
25. rpl6 ENSDARG00000058451 82152 0.909 - - - - - - 0.909 - - ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
26. rhoac ENSDARG00000116058 9256 0.903 - - - - - 0.903 - - - ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
27. U3_2 U3_2 669 0.898 - - - - - 0.898 - - -
28. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 0.893 - - - - - 0.893 - - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
29. ldha ENSDARG00000101251 10868 0.893 - - - - - 0.893 - - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
30. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 0.89 - - - - - 0.890 - - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
31. pebp1 ENSDARG00000042069 6651 0.881 - - - - - 0.881 - - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
32. IGFN1 IGFN1 5030 0.878 - - - - - 0.878 - - -
33. mybpc3 ENSDARG00000011615 7271 0.877 - - - - - 0.877 - - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
34. tufm ENSDARG00000104173 9292 0.876 - - - - - 0.876 - - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
35. klhl40b ENSDARG00000019125 3633 0.876 - - - - - 0.876 - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
36. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.876 - - - - - 0.876 - - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
37. psma3 ENSDARG00000086618 6200 0.876 - - - - - 0.876 - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
38. znf106a ENSDARG00000016651 6049 0.875 - - - - - 0.875 - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
39. rps17 ENSDARG00000104011 27028 0.874 - - 0.874 - - - - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
40. ebf3 ebf3 4238 0.874 - - - - - 0.874 - - -
41. nhsl1b ENSDARG00000042627 3697 0.874 - - - - - 0.874 - - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
42. mrps24 ENSDARG00000100116 1750 0.874 - - - - - 0.874 - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
43. chst11 ENSDARG00000034375 2701 0.874 - - - - - 0.874 - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
44. sgcb ENSDARG00000052341 4168 0.873 - - - - - 0.873 - - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
45. vcl vcl 6667 0.873 - - - - - 0.873 - - -
46. CABZ01028296.1 CABZ01028296.1 6203 0.873 - - - - - 0.873 - - -
47. fam131bb ENSDARG00000070575 1054 0.873 - - - - - 0.873 - - - family with sequence similarity 131, member Bb [Source:ZFIN;Acc:ZDB-GENE-100922-12]
48. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 0.873 - - - - - 0.873 - - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
49. sdha ENSDARG00000016721 8255 0.872 - - - - - 0.872 - - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
50. ppm1la ENSDARG00000063218 2142 0.872 - - - - - 0.872 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
51. eprs ENSDARG00000060494 4729 0.871 - - - - - 0.871 - - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
52. nudt3a ENSDARG00000016256 2713 0.871 - - - - - 0.871 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
53. fam50a ENSDARG00000024895 3020 0.871 - - - - - 0.871 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
54. rps27.2 ENSDARG00000055475 51081 0.871 0.871 - - - - - - - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
55. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 0.871 - - - - - 0.871 - - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
56. wwp2 ENSDARG00000061345 3459 0.87 - - - - - 0.870 - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
57. zgc:66479 ENSDARG00000008732 3347 0.87 - - - - - 0.870 - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
58. SPIN4_1 SPIN4_1 2562 0.87 - - - - - 0.870 - - -
59. sart3 ENSDARG00000008032 2594 0.869 - - - - - 0.869 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
60. hspb7 ENSDARG00000104441 1417 0.869 - - - - - 0.869 - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
61. mef2cb ENSDARG00000009418 1124 0.869 - - - - - 0.869 - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
62. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 0.869 - - - - - 0.869 - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
63. prkacaa ENSDARG00000100349 2711 0.869 - - - - - 0.869 - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
64. pfkpa ENSDARG00000028000 1206 0.868 - - - - - 0.868 - - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]
65. mcm7 ENSDARG00000101180 12417 0.868 - - - - - 0.868 - - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
66. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 0.868 - - - - - 0.868 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
67. si:dkeyp-27e10.3 ENSDARG00000063008 369 0.868 - - - - - 0.868 - - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
68. cpsf6 ENSDARG00000018618 3923 0.868 - - - - - 0.868 - - - cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
69. MTMR11 ENSDARG00000069755 917 0.868 - - - - - 0.868 - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
70. UNCX ENSDARG00000102976 847 0.868 - - - - - 0.868 - - - UNC homeobox [Source:ZFIN;Acc:ZDB-GENE-080509-1]
71. nuf2 ENSDARG00000034624 2252 0.868 - - - - - 0.868 - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
72. icln icln 1279 0.868 - - - - - 0.868 - - -
73. dlb ENSDARG00000004232 5120 0.867 - - - - - 0.867 - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
74. slc2a15a ENSDARG00000029894 2674 0.867 - - - - - 0.867 - - - solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
75. larp1b ENSDARG00000061169 9939 0.867 - - - - - 0.867 - - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
76. kank2 ENSDARG00000018393 1804 0.867 - - - - - 0.867 - - - KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
77. MIB1 ENSDARG00000102184 3285 0.867 - - - - - 0.867 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
78. arl8ba ENSDARG00000006915 720 0.867 - - - - - 0.867 - - - ADP-ribosylation factor-like 8Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9370]
79. ufm1 ENSDARG00000043857 4152 0.867 - - - - - 0.867 - - - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
80. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.867 - - - - - 0.867 - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
81. pacsin3 ENSDARG00000099339 4668 0.867 - - - - - 0.867 - - - protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
82. timm10b ENSDARG00000043898 1233 0.867 - - - - - 0.867 - - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
83. FRG1 ENSDARG00000056504 1196 0.866 - - - - - 0.866 - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
84. nudcd2 ENSDARG00000078059, ENSDARG00000109490 2234 0.866 - - - - - 0.866 - - - NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]
85. hoxb1a ENSDARG00000008174 462 0.866 - - - - - 0.866 - - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
86. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.866 - - - - - 0.866 - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
87. tmem161a ENSDARG00000012790 16094 0.866 - - - - - 0.866 - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
88. thbs4b ENSDARG00000020072 2500 0.866 - - - - - 0.866 - - - thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
89. ctdspla ENSDARG00000071673 1447 0.866 - - - - - 0.866 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
90. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 0.866 - - - - - 0.866 - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
91. flcn ENSDARG00000062385, ENSDARG00000116055 614 0.865 - - - - - 0.865 - - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
92. zcchc7 ENSDARG00000055443 2159 0.865 - - - - - 0.865 - - - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
93. thoc1 ENSDARG00000088246 1718 0.865 - - - - - 0.865 - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
94. hm13 ENSDARG00000037846 5019 0.865 - - - - - 0.865 - - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
95. s1pr2 ENSDARG00000036548 1109 0.865 - - - - - 0.865 - - - sphingosine-1-phosphate receptor 2 [Source:ZFIN;Acc:ZDB-GENE-020123-2]
96. ndrg2 ENSDARG00000011170 11442 0.865 - - - - - 0.865 - - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
97. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 0.865 - - - - - 0.865 - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
98. olfml2bb ENSDARG00000021480 256 0.865 - - - - - 0.865 - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
99. gopc ENSDARG00000023117 1206 0.865 - - - - - 0.865 - - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]
100. LRP10 ENSDARG00000054539 1895 0.864 - - - - - 0.864 - - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]

There are 289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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