Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl5a

Gene Name Gene ID Reads Annotation
rpl5a ENSDARG00000020197 35209 ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]










Genes with expression patterns similar to rpl5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl5a ENSDARG00000020197 35209 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
2. tomm5 ENSDARG00000068265 11813 3.271 0.817 - - 0.919 0.831 0.704 - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
3. rps29 ENSDARG00000041232 71334 2.425 0.845 - - 0.869 - - 0.711 - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
4. rpl13 ENSDARG00000099380 20663 1.819 0.871 - - 0.948 - - - - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
5. mpi ENSDARG00000030786 3052 1.809 - - - 0.930 - 0.879 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
6. rpn1 ENSDARG00000059323 10411 1.785 - - 0.800 - - - 0.985 - - ribophorin I [Source:ZFIN;Acc:ZDB-GENE-030131-4286]
7. pcmt ENSDARG00000015201 5132 1.767 - - - 0.922 - 0.845 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
8. acsl3b ENSDARG00000014674 3748 1.746 - 0.810 - 0.936 - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
9. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.714 - - - 0.944 0.770 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
10. akr1b1 ENSDARG00000006215 2511 1.696 - 0.822 - - - 0.874 - - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
11. cxxc5a ENSDARG00000078865 3447 1.687 - 0.818 - - - 0.869 - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
12. cul4b ENSDARG00000060510 6053 1.674 - - - 0.943 0.731 - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
13. eif2s3 ENSDARG00000008292 17051 1.673 0.720 - - 0.953 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
14. dnajb12b ENSDARG00000087473 3811 1.672 - 0.812 - - - 0.860 - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
15. ywhabb ENSDARG00000075758 23104 1.667 - 0.741 - 0.926 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
16. parvaa ENSDARG00000043710 3495 1.661 - - - - 0.779 0.882 - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
17. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.66 0.788 - 0.872 - - - - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
18. uqcrc2b ENSDARG00000071691 13296 1.655 0.846 0.809 - - - - - - - ubiquinol-cytochrome c reductase core protein 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1269]
19. serbp1a ENSDARG00000074242 10818 1.643 0.711 - - 0.932 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
20. herpud2 ENSDARG00000021033 1800 1.64 - - - 0.927 0.713 - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
21. ctsf ENSDARG00000063095 4564 1.639 - - - - 0.770 0.869 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
22. tceb1b 14935 1.632 0.813 - - 0.819 - - - - - transcription elongation factor B (SIII), polypeptide 1b
23. twf1a ENSDARG00000115712 3465 1.629 - - - - - 0.880 0.749 - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
24. pes ENSDARG00000018902 3286 1.617 - - 0.730 - - 0.887 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
25. polr2d ENSDARG00000076509 3386 1.615 - 0.814 - - 0.801 - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
26. mapk3 ENSDARG00000070573 6842 1.611 - - - - 0.807 0.804 - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
27. usp28 ENSDARG00000008880 1850 1.609 0.730 - - - - 0.879 - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
28. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.598 - 0.748 - - 0.850 - - - - GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
29. eef1b2 ENSDARG00000044521 26570 1.595 0.889 - - - - 0.706 - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
30. hnrpdl 14288 1.594 - - 0.836 - - 0.758 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
31. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.591 - 0.719 - - - 0.872 - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
32. si:ch73-375g18.1 ENSDARG00000075024 2431 1.589 - - 0.709 - - 0.880 - - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
33. chrnd ENSDARG00000019342 2728 1.579 0.701 - - - - 0.878 - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
34. ube2v2 ENSDARG00000028198 23341 1.578 0.729 - 0.849 - - - - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
35. tmem161a ENSDARG00000012790 16094 1.573 0.724 0.849 - - - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
36. tceb2 10382 1.571 - - - - 0.763 0.808 - - - transcription elongation factor B (SIII), polypeptide 2
37. amotl2a ENSDARG00000061923 4713 1.567 - - - - 0.716 0.851 - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
38. casq1b ENSDARG00000018105 2643 1.558 0.703 - - - - 0.855 - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
39. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.555 - 0.788 0.767 - - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
40. hp1bp3 ENSDARG00000044669 23708 1.552 - 0.816 - - - - 0.736 - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
41. cyc1 ENSDARG00000038075 16699 1.55 0.779 - 0.771 - - - - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
42. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 1.539 - 0.817 - - 0.722 - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
43. wasf3 wasf3 3287 1.536 - 0.818 - - 0.718 - - - -
44. PLEKHG1 2100 1.523 - 0.818 - - 0.705 - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
45. arf1l arf1l 9119 1.52 - 0.705 - - - 0.815 - - -
46. selt2 12741 1.518 0.728 0.790 - - - - - - - selenoprotein T, 2
47. rtn2a ENSDARG00000016088 12184 1.517 0.712 0.805 - - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
48. fkbp4 ENSDARG00000008447 3736 1.51 0.703 - - - 0.807 - - - - FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
49. murca murca 6614 1.509 0.762 - - - - - 0.747 - -
50. eif3s10 ENSDARG00000076815 10822 1.508 0.728 0.780 - - - - - - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
51. kars ENSDARG00000103799 20937 1.506 0.764 - - - - - 0.742 - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
52. rps27.1 ENSDARG00000023298 86382 1.504 0.790 - - - 0.714 - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
53. gltscr2 gltscr2 5763 1.503 - - 0.781 - 0.722 - - - -
54. dlst ENSDARG00000014230, ENSDARG00000113407 6282 1.499 0.725 0.774 - - - - - - - dihydrolipoamide S-succinyltransferase [Source:ZFIN;Acc:ZDB-GENE-030326-1]
55. cct4 ENSDARG00000013475 23959 1.497 0.794 - - - - 0.703 - - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
56. hypk ENSDARG00000059725 20584 1.495 - - 0.775 - - 0.720 - - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
57. mrpl54 ENSDARG00000071468 2715 1.489 0.770 - - - 0.719 - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
58. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.487 0.746 - - - - - 0.741 - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
59. C1QBP ENSDARG00000039887 11186 1.482 0.748 0.734 - - - - - - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
60. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.482 - - 0.767 - 0.715 - - - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
61. rps7 ENSDARG00000042566 57650 1.48 0.764 - - - - 0.716 - - - ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
62. mt-nd5 ENSDARG00000063921 21268 1.47 - - 0.731 - - 0.739 - - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
63. eif3ea ENSDARG00000090697 14670 1.469 - - 0.703 - 0.766 - - - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
64. bag6 ENSDARG00000075892 3782 1.468 - - 0.738 - 0.730 - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
65. sucla2 ENSDARG00000005359 5992 1.458 0.711 - - - - - 0.747 - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
66. actn3b ENSDARG00000001431 15747 1.456 0.724 - - - - - 0.732 - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
67. tmem5 1630 1.453 - - - - 0.702 - 0.751 - - transmembrane protein 5
68. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.444 0.736 - - - - - 0.708 - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
69. ppp4cb ENSDARG00000076439 1693 1.437 - - 0.712 - 0.725 - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
70. CYYR1 ENSDARG00000103783 4107 1.437 0.707 - - - 0.730 - - - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
71. lamc1 ENSDARG00000036279 11025 1.436 - 0.726 - - 0.710 - - - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
72. utp18 ENSDARG00000102618 1983 1.411 - - 0.710 - 0.701 - - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
73. vdac2 ENSDARG00000013623 37765 1.404 0.701 0.703 - - - - - - - voltage-dependent anion channel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-845]
74. col18a1 col18a1 20555 0.945 - - - 0.945 - - - - -
75. impdh1b ENSDARG00000029524 7472 0.943 - - - - - - 0.943 - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
76. CABZ01111496.1 ENSDARG00000003041 15566 0.94 - - - - - - 0.940 - - E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
77. prpf40a ENSDARG00000058467 6565 0.939 - - - 0.939 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
78. EIF1B ENSDARG00000029445 5034 0.938 - - - 0.938 - - - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
79. blcap ENSDARG00000052073 8646 0.937 - - - 0.937 - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
80. SERBP1 SERBP1 9276 0.937 - - - 0.937 - - - - -
81. AGO1 ENSDARG00000092644 4521 0.937 - - - 0.937 - - - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
82. smc1al ENSDARG00000058203 8838 0.935 - - - 0.935 - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
83. ppp6c ENSDARG00000002949 2948 0.934 - - - 0.934 - - - - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
84. txndc5 ENSDARG00000009342 5387 0.934 - - - 0.934 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
85. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 0.932 - - - 0.932 - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
86. fermt2 ENSDARG00000020242 9351 0.932 - - - 0.932 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
87. rerea ENSDARG00000077353 4162 0.931 - - - 0.931 - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
88. zgc:56493 ENSDARG00000031435 33407 0.93 - - - 0.930 - - - - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
89. alas1 ENSDARG00000021059 4892 0.93 - - - 0.930 - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
90. nkrf ENSDARG00000100536 1873 0.929 - - - 0.929 - - - - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
91. ADAMTS3 ENSDARG00000060127 2839 0.929 - - - 0.929 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
92. gap43 ENSDARG00000099744 4114 0.928 - - - 0.928 - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
93. CU929431.1 CU929431.1 2234 0.928 - - - 0.928 - - - - -
94. ARHGAP23 ARHGAP23 3946 0.928 - - - 0.928 - - - - -
95. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.927 - - - 0.927 - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
96. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.927 - - - 0.927 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
97. C3H19orf43 C3H19orf43 2961 0.927 - - - 0.927 - - - - -
98. tuba1c ENSDARG00000055216 8384 0.927 - - - 0.927 - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
99. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.927 - - - 0.927 - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
100. camsap2 camsap2 1448 0.927 - - - 0.927 - - - - -

There are 789 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA