Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpl4

Gene Name Gene ID Reads Annotation
rpl4 ENSDARG00000041182 18655 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]










Genes with expression patterns similar to rpl4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl4 ENSDARG00000041182 18655 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
2. selt2 12741 3.583 - - - 0.977 - - 0.996 0.705 0.905 selenoprotein T, 2
3. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 2.838 - - 0.976 0.976 - 0.886 - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
4. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 2.623 0.805 - - 0.823 - - 0.995 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
5. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 2.461 - - 0.798 - - - 0.932 - 0.731 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
6. sri ENSDARG00000058593 13152 1.947 - - 0.976 0.971 - - - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
7. stip1 ENSDARG00000004906 7742 1.923 - - 0.969 - - - - - 0.954 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
8. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.903 - - 0.952 - - - - - 0.951 regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
9. kctd5 kctd5 13455 1.888 - - 0.971 - - - - - 0.917
10. eif4ebp2 ENSDARG00000031819 13168 1.887 - - 0.929 0.958 - - - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
11. snx12 ENSDARG00000019060 9563 1.884 - - - - - 0.905 - - 0.979 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
12. mybpc3 ENSDARG00000011615 7271 1.863 0.876 - - - - - 0.987 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
13. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.847 - - - 0.970 - 0.877 - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
14. rhoad rhoad 8007 1.846 0.852 - - - - - 0.994 - -
15. yes1 ENSDARG00000005941 3577 1.845 - 0.968 - - - 0.877 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
16. tnni2b.1 ENSDARG00000035958 51597 1.841 - - - - - 0.935 0.906 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
17. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.834 0.923 - - - - 0.911 - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
18. atp5f1 16797 1.821 0.907 - - - - 0.914 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
19. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 1.82 - - - - - 0.866 - - 0.954 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
20. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.787 - - - - - 0.874 - - 0.913 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
21. myh10 ENSDARG00000000103 7522 1.783 - - - - 0.835 - - - 0.948 myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
22. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.781 0.855 - 0.926 - - - - - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
23. tob1b ENSDARG00000021372 7048 1.776 0.883 - - - - 0.893 - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
24. rps17 ENSDARG00000104011 27028 1.776 - - 0.849 - - 0.927 - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
25. MARK4 ENSDARG00000024966 3377 1.764 0.791 - - 0.973 - - - - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
26. psmb1 ENSDARG00000009640 8628 1.75 - - - - - - 0.995 0.755 - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
27. ppp2r2a ppp2r2a 5785 1.726 0.850 - - - - 0.876 - - -
28. ube2v1 ENSDARG00000041875 5739 1.722 0.827 - - - - 0.895 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
29. abca3b ENSDARG00000100524 2416 1.716 - - 0.977 - - - - 0.739 - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
30. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.714 - - - - - - - 0.758 0.956 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
31. anxa1a ENSDARG00000026726 23173 1.713 - - - 0.937 - - - - 0.776 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
32. ndrg3a ENSDARG00000013087 5581 1.708 - - - 0.977 - - - 0.731 - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
33. fam133b ENSDARG00000013863 5070 1.706 - - - - - - 0.994 0.712 - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
34. mcts1 ENSDARG00000025972 4662 1.686 - - - - - 0.880 - 0.806 - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
35. si:ch211-166a6.5 ENSDARG00000079745 11111 1.684 - - 0.914 - - 0.770 - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
36. crtap ENSDARG00000018010 7722 1.68 0.839 - - - - - - 0.841 - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
37. hnrpdl 14288 1.669 0.840 - - - - 0.829 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
38. hnrnpm ENSDARG00000061735 19428 1.664 0.809 - 0.855 - - - - - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
39. CREM CREM 1333 1.663 0.787 - - - - 0.876 - - -
40. phb ENSDARG00000057414 9551 1.661 - - - - - 0.923 - 0.738 - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
41. ammecr1 ENSDARG00000012892 14475 1.655 0.873 - 0.782 - - - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
42. TUBA1A ENSDARG00000001889 25294 1.644 - 0.931 0.713 - - - - - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
43. cx43.4 ENSDARG00000007099 16369 1.641 - - - 0.898 0.743 - - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
44. plcd1b ENSDARG00000034080 4074 1.558 - - - - - 0.853 - 0.705 - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
45. ak1 ENSDARG00000001950 26964 1.547 0.774 - - - - - - - 0.773 adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
46. zgc:63587 ENSDARG00000017140 8399 1.534 0.819 - - - - 0.715 - - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
47. rpl14 ENSDARG00000103433 69914 1.52 - - - - - 0.742 0.778 - - ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
48. atl3 ENSDARG00000004270 2806 1.517 0.792 - - - - - - 0.725 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
49. arf2 arf2 12369 1.478 - - - - 0.720 - 0.758 - -
50. ARHGEF5 2727 1.458 0.704 - - - - 0.754 - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
51. rpl19 ENSDARG00000013307 122192 1.433 - - - - 0.702 - - - 0.731 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
52. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.996 - - - - - - 0.996 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
53. vbp1 ENSDARG00000030241 10619 0.996 - - - - - - 0.996 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
54. hspe1 ENSDARG00000056167 21636 0.996 - - - - - - 0.996 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
55. kpnb1 ENSDARG00000104889 9282 0.995 - - - - - - 0.995 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
56. smyd2b ENSDARG00000005629 8181 0.995 - - - - - - 0.995 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
57. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.995 - - - - - - 0.995 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
58. CR548630.1 CR548630.1 3301 0.994 - - - - - - 0.994 - -
59. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.994 - - - - - - 0.994 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
60. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.994 - - - - - - 0.994 - -
61. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.994 - - - - - - 0.994 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
62. tnni1al 8272 0.994 - - - - - - 0.994 - - troponin I, skeletal, slow like, transcript variant X1
63. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.993 - - - - - - 0.993 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
64. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.993 - - - - - - 0.993 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
65. SEMA5B SEMA5B 1316 0.993 - - - - - - 0.993 - -
66. SGPP1 ENSDARG00000060534 1802 0.993 - - - - - - 0.993 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
67. si:ch211-71n6.4 ENSDARG00000102234 2499 0.993 - - - - - - 0.993 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
68. sdprb sdprb 13647 0.993 - - - - - - 0.993 - -
69. foxp1a ENSDARG00000004843 3961 0.993 - - - - - - 0.993 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
70. map7d3 ENSDARG00000060771 1739 0.993 - - - - - - 0.993 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
71. aaas ENSDARG00000102274 1192 0.993 - - - - - - 0.993 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
72. CAPN2 CAPN2 1497 0.993 - - - - - - 0.993 - -
73. sfrp5 ENSDARG00000039041 1777 0.993 - - - - - - 0.993 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
74. clasp2 ENSDARG00000020345 3382 0.993 - - - - - - 0.993 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
75. klf11a ENSDARG00000030844 3972 0.991 - - - - - - 0.991 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
76. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.99 - - - - - - 0.990 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
77. syncrip ENSDARG00000040184 24690 0.987 - - - - - - 0.987 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
78. apg3l apg3l 5153 0.985 - - - - - - 0.985 - -
79. ndufv3 ENSDARG00000090389 4829 0.983 - - 0.983 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
80. PYURF ENSDARG00000045773 4576 0.983 - - 0.983 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
81. serpine2 ENSDARG00000029353 2274 0.983 - - 0.983 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
82. pfdn4 ENSDARG00000061228 8266 0.983 - - - - - - - - 0.983 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
83. ptbp2a ENSDARG00000101947 1921 0.981 - - 0.981 - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
84. aup1 ENSDARG00000092609 2431 0.981 - - 0.981 - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
85. midn ENSDARG00000018524 7559 0.981 - - - - - - - - 0.981 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
86. brd8 ENSDARG00000025071 2605 0.981 - - 0.981 - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
87. psma6b ENSDARG00000013966 4410 0.981 - - 0.981 - - - - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
88. GSG2 GSG2 1162 0.98 - - 0.980 - - - - - -
89. trps1 ENSDARG00000104082 918 0.98 - - 0.980 - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
90. tbp ENSDARG00000014994 1591 0.98 - - 0.980 - - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
91. ube2v2 ENSDARG00000028198 23341 0.98 - - - 0.980 - - - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
92. FUZ ENSDARG00000079730 821 0.98 - - 0.980 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
93. METTL18 ENSDARG00000074588 918 0.98 - - 0.980 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
94. suz12a ENSDARG00000070256 2229 0.98 - - 0.980 - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
95. sh3bgrl3 ENSDARG00000098075 3071 0.98 - - 0.980 - - - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
96. rab35 rab35 1287 0.98 - - 0.980 - - - - - -
97. pde12 ENSDARG00000030964 615 0.98 - - 0.980 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
98. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.98 - - 0.980 - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
99. lmx1bb ENSDARG00000068365 627 0.98 - - 0.980 - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
100. eif3k ENSDARG00000068289 1102 0.98 - - 0.980 - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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