Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl35a

Gene Name Gene ID Reads Annotation
rpl35a ENSDARG00000088030 60686 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]










Genes with expression patterns similar to rpl35a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl35a ENSDARG00000088030 60686 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
2. fam50a ENSDARG00000024895 3020 1.621 - - - - - 0.746 - - 0.875 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
3. rplp2l ENSDARG00000011201 77026 1.594 0.775 0.819 - - - - - - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
4. rpl8 ENSDARG00000014867 168995 1.525 0.822 - - - 0.703 - - - - ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
5. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 1.512 - 0.763 - - - - 0.749 - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
6. rpl5b ENSDARG00000015862, ENSDARG00000109661 79810 1.481 0.758 - - 0.723 - - - - - ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
7. rpl31 ENSDARG00000053365 55475 1.464 0.751 - - - 0.713 - - - - ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
8. mt-co2 ENSDARG00000063908 621861 1.427 0.710 0.717 - - - - - - - cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. rps17 ENSDARG00000104011 27028 0.96 - - - - - - - - 0.960 ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
10. serinc1 ENSDARG00000009106 10571 0.934 - - - - - 0.934 - - - serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
11. adnp2b ENSDARG00000028431 4683 0.917 - - - - - - - - 0.917 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
12. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.914 - - - - - - - - 0.914 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
13. zgc:77086 ENSDARG00000014015 4908 0.913 - - - - - - - - 0.913 zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
14. rd3 ENSDARG00000031600 1085 0.902 - - - - - - - - 0.902 retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
15. atp1b3a ENSDARG00000015790 12310 0.901 - - - - - - - - 0.901 ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
16. cox4i1 ENSDARG00000032970 53784 0.9 - - - - - - - - 0.900 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
17. pcdh1gc5 ENSDARG00000104826 10052 0.896 - - - - - - - - 0.896 protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
18. cd81 cd81 44833 0.896 - - - - - - - - 0.896
19. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 0.89 - - - - - - - - 0.890 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
20. rtn1a ENSDARG00000006497 19339 0.89 - - - - - - - - 0.890 reticulon 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2426]
21. si:dkey-67c22.2 ENSDARG00000055389 6410 0.886 - - - - - - - - 0.886 si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
22. nipblb ENSDARG00000061052 6109 0.886 - - - - - - - - 0.886 nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
23. meaf6 ENSDARG00000101216 6865 0.886 - - - - - - - - 0.886 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
24. efnb3b ENSDARG00000042277 5823 0.885 - - - - - - - - 0.885 ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
25. sf3b5 ENSDARG00000016855 4015 0.885 - - - - - - - - 0.885 splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
26. gpx4b ENSDARG00000076836 8085 0.884 - - - - - - - - 0.884 glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
27. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 0.883 - - - - - - - - 0.883 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
28. cenpf ENSDARG00000055133 5267 0.883 - - - - - - - - 0.883 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
29. NDNF ENSDARG00000062936 7287 0.883 - - - - - - - - 0.883 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
30. fmr1 ENSDARG00000037433 5132 0.882 - - - - - 0.882 - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
31. PHB2 PHB2 3755 0.882 - - - - - 0.882 - - -
32. grpel1 ENSDARG00000010021 3055 0.881 - - - - - 0.881 - - - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
33. FRMD4A ENSDARG00000042249 2883 0.881 - - - - - - - - 0.881 FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
34. tmed9 ENSDARG00000004261 10013 0.88 - - - - - - - - 0.880 transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
35. cdc25 cdc25 3913 0.88 - - - - - - - - 0.880
36. snrnp27 ENSDARG00000035625 9080 0.879 - - - - - - - - 0.879 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
37. rufy3 ENSDARG00000029692 3031 0.879 - - - - - - - - 0.879 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
38. CU571336.1 ENSDARG00000099892 2164 0.879 - - - - - 0.879 - - -
39. psma6b ENSDARG00000013966 4410 0.878 - - - - - - - - 0.878 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
40. si:ch211-262h13.3 ENSDARG00000070898 2094 0.878 - - - - - - - - 0.878 si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
41. rps27.1 ENSDARG00000023298 86382 0.878 - - - - - - - - 0.878 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
42. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 0.877 - - - - - - - - 0.877 nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
43. zgc:153662 zgc:153662 4604 0.877 - - - - - 0.877 - - -
44. histh1l ENSDARG00000035519 12293 0.876 - - - - - - - - 0.876 histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
45. nup50 ENSDARG00000017454 4425 0.876 - - - - - - - - 0.876 nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
46. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 0.876 - - - - - - - - 0.876 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
47. fam105bb fam105bb 1253 0.875 - - - - - - - - 0.875
48. lemd3 ENSDARG00000015824 2868 0.875 - - - - - - - - 0.875 LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
49. chchd3 chchd3 4139 0.875 - - - - - - - - 0.875
50. mrpl12 ENSDARG00000038768 5539 0.875 - - - - - - - - 0.875 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
51. eif3s6ip ENSDARG00000101082 18515 0.874 - - - - - - - - 0.874 eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
52. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.874 - - - - - - - - 0.874 atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
53. ptrhd1 ENSDARG00000016122 2705 0.874 - - - - - - - - 0.874 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
54. bin3 ENSDARG00000099651 3295 0.874 - - - - - - - - 0.874 bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
55. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.874 - - - - - - - - 0.874 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
56. txndc17 ENSDARG00000058079 3533 0.873 - - - - - - - - 0.873 thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
57. palld ENSDARG00000040009 2381 0.873 - - - - - - - - 0.873 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
58. atg5 ENSDARG00000023396 1726 0.873 - - - - - - - - 0.873 ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
59. NEDD4 NEDD4 2040 0.873 - - - - - - - - 0.873
60. pigk ENSDARG00000024479 1386 0.872 - - - - - - - - 0.872 phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
61. arl8bb ENSDARG00000070318 1428 0.872 - - - - - - - - 0.872 ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
62. CT955984.1 ENSDARG00000113577 1482 0.872 - - - - - - - - 0.872
63. snapin ENSDARG00000062382 1531 0.872 - - - - - - - - 0.872 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
64. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.872 - - - - - - - - 0.872 interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
65. IGLON5 ENSDARG00000022176 1353 0.872 - - - - - - - - 0.872 IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
66. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 0.871 - - - - - - - - 0.871 phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
67. TMEM254 ENSDARG00000109902 3377 0.871 - - - - - - - - 0.871 transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
68. syncrip ENSDARG00000040184 24690 0.871 - - - - - - - - 0.871 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
69. asb4 ENSDARG00000034988 1115 0.871 - - - - - - - - 0.871 ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
70. kif3cb ENSDARG00000079500 935 0.871 - - - - - - - - 0.871 kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
71. ATP10B ENSDARG00000076230 989 0.871 - - - - - - - - 0.871 ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
72. mkln1 ENSDARG00000025576 1122 0.871 - - - - - - - - 0.871 muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
73. slc6a9 ENSDARG00000018534 4089 0.87 - - - - - 0.870 - - - solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:ZFIN;Acc:ZDB-GENE-050105-3]
74. slc37a4a ENSDARG00000038106 1375 0.87 - - - - - - - - 0.870 solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
75. SHROOM2 SHROOM2 934 0.87 - - - - - - - - 0.870
76. zgc:162608 ENSDARG00000069375 2881 0.87 - - - - - - - - 0.870 zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
77. zgc:165347 zgc:165347 1358 0.869 - - - - - - - - 0.869
78. ylpm1 ENSDARG00000043680 7676 0.869 - - - - - - - - 0.869 YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
79. tmem182 tmem182 12589 0.868 - - - - - - - - 0.868
80. lyrm2 ENSDARG00000033138 5597 0.865 - - - - - - - - 0.865 LYR motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-040914-27]
81. efemp2a ENSDARG00000094324 39261 0.865 - - - - - - - - 0.865 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
82. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 0.864 - - - - - - - - 0.864 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
83. idh3g ENSDARG00000023648 4877 0.863 - - - - - - - - 0.863 isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
84. BX294434.1 ENSDARG00000061272 6493 0.86 - - - - - 0.860 - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
85. hbbe1.1_1 ENSDARG00000113599 31704 0.857 - - - - - 0.857 - - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
86. si:dkey-193p11.2 ENSDARG00000096712 3500 0.854 - - - - - - - - 0.854 si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
87. RPS17L RPS17L 51105 0.851 - - 0.851 - - - - - -
88. enpp1 ENSDARG00000005789 3267 0.847 - - - - - - - - 0.847 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
89. serp1 ENSDARG00000099439 23682 0.844 - - - - - - - - 0.844 stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
90. rpl26 ENSDARG00000102317 154515 0.843 - 0.843 - - - - - - - ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
91. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.843 - - - - - 0.843 - - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
92. atp5a1 48823 0.841 - - - - - - - - 0.841 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
93. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 0.84 0.840 - - - - - - - - ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
94. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 0.839 - - - - - - 0.839 - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
95. khdrbs1a ENSDARG00000052856 53666 0.836 - - - - - - - - 0.836 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
96. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 0.83 0.830 - - - - - - - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
97. smarca4 smarca4 9726 0.822 - - - - - - - - 0.822
98. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 0.812 0.812 - - - - - - - - basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
99. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 0.807 0.807 - - - - - - - - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
100. cmpk ENSDARG00000019924 8676 0.806 - - - - - - 0.806 - - cytidylate kinase [Source:ZFIN;Acc:ZDB-GENE-040426-2113]

There are 177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA