Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl31

Gene Name Gene ID Reads Annotation
rpl31 ENSDARG00000053365 55475 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]










Genes with expression patterns similar to rpl31

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl31 ENSDARG00000053365 55475 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
2. rps10 ENSDARG00000034897 71395 2.513 0.953 - - - - 0.759 - - 0.801 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
3. cct6a ENSDARG00000021252 33641 2.298 0.792 0.791 - - - - - - 0.715 chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
4. rab2a ENSDARG00000020261 24540 1.822 - - - - - - 0.902 - 0.920 RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
5. dyrk1b ENSDARG00000070187 2777 1.787 - 0.900 - - - - 0.887 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
6. eif2a ENSDARG00000101061 3800 1.778 - 0.877 - - - - 0.901 - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
7. rps27.2 ENSDARG00000055475 51081 1.768 0.937 - 0.831 - - - - - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
8. znf706 ENSDARG00000056307 12518 1.765 - 0.904 - - - - 0.861 - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
9. decr1 ENSDARG00000003869 1344 1.737 - 0.896 - - - - 0.841 - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
10. NUAK1_1 NUAK1_1 1782 1.721 - 0.896 - - - - 0.825 - -
11. sptbn2 ENSDARG00000053956 8452 1.72 - - - - - - 0.830 - 0.890 spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
12. atp5g3b 69028 1.713 0.892 - - - - - - - 0.821 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
13. CABZ01081490.1 ENSDARG00000111653 11892 1.691 - 0.897 - - - - 0.794 - -
14. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.688 - 0.882 - - - - 0.806 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
15. bin2b ENSDARG00000010255 2649 1.683 - - - - - - 0.807 - 0.876 bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
16. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.661 - - 0.780 - - - - - 0.881 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
17. serbp1a ENSDARG00000074242 10818 1.653 - - - 0.701 - - 0.952 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
18. tnnt3a ENSDARG00000030270 112506 1.651 0.806 0.845 - - - - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
19. acsf2 ENSDARG00000061201 4413 1.629 - 0.897 - - - - 0.732 - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
20. faua ENSDARG00000099022 82901 1.61 0.812 - 0.798 - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
21. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.608 - 0.754 - - - - 0.854 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
22. tomm5 ENSDARG00000068265 11813 1.593 - - - 0.721 - - 0.872 - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
23. rps25 ENSDARG00000041811 52182 1.59 - - - - - - 0.809 - 0.781 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
24. pgam2 ENSDARG00000057571 23387 1.576 - - - - - 0.715 - - 0.861 phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
25. CU929431.1 CU929431.1 2234 1.568 - - - 0.702 - - 0.866 - -
26. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 1.538 0.803 - - - - - - 0.735 - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
27. rplp2 ENSDARG00000101406 77670 1.536 0.738 - 0.798 - - - - - - ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
28. sdhdb ENSDARG00000030139 9761 1.535 - - 0.726 - - - 0.809 - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
29. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 1.51 0.721 - - - - - - - 0.789 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
30. atp5g3a 9539 1.488 - - - - - 0.774 0.714 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
31. rpl35a ENSDARG00000088030 60686 1.464 0.751 - - - 0.713 - - - - ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
32. eif2s3 ENSDARG00000008292 17051 1.452 - - 0.746 0.706 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
33. NDUFA3 ENSDARG00000041400 7939 0.976 - - - - - - 0.976 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
34. psma3 ENSDARG00000086618 6200 0.959 - - - - - - 0.959 - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
35. aass ENSDARG00000051816 3795 0.954 - - - - - - 0.954 - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
36. emc6 ENSDARG00000035282 4981 0.941 - - - - - - 0.941 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
37. nmt1a ENSDARG00000052966 5918 0.94 - - - - - - 0.940 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
38. cnih cnih 8292 0.94 - - - - - - 0.940 - -
39. srsf2a ENSDARG00000057484 25721 0.936 - - - - - - 0.936 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
40. mrps30 ENSDARG00000104111 2900 0.932 - - - - - - 0.932 - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
41. ndufa6 ENSDARG00000038028 2653 0.932 - - - - - - 0.932 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
42. uqcrfs1 ENSDARG00000007745 4654 0.931 - - - - - - 0.931 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
43. clic4 ENSDARG00000022995 6064 0.929 - - - - - - 0.929 - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
44. tuba8l3 ENSDARG00000070155 7525 0.929 - - - - - - 0.929 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
45. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.928 - - - - - - 0.928 - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
46. flot1b ENSDARG00000037998 13600 0.927 - - - - - - 0.927 - - flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
47. si:ch211-196l7.4 ENSDARG00000095451 3766 0.925 - - - - - - 0.925 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
48. ndufb7 ENSDARG00000033789 5898 0.925 - - - - - - 0.925 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
49. mrpl27 ENSDARG00000032985 2158 0.924 - - - - - - 0.924 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
50. ppp3r1a ENSDARG00000092659 9729 0.923 - - - - - - 0.923 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
51. igf2bp3 ENSDARG00000010266 5789 0.923 - - - - - - 0.923 - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
52. cdkn2aipnl ENSDARG00000053395 5107 0.923 - - - - - - 0.923 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
53. cdc42 ENSDARG00000044573 11795 0.92 - - - - - - 0.920 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
54. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 0.92 - 0.920 - - - - - - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
55. erh ENSDARG00000032866 20633 0.919 - - - - - - 0.919 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
56. hadh ENSDARG00000030765 3406 0.918 - - - - - - 0.918 - - hydroxyacyl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040801-261]
57. klhl40b ENSDARG00000019125 3633 0.917 - - - - - - 0.917 - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
58. pdcd6 ENSDARG00000005220 1535 0.917 - - - - - - 0.917 - - programmed cell death 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1307]
59. uqcc uqcc 4742 0.917 - - - - - - 0.917 - -
60. cox6b2 ENSDARG00000037860 33134 0.914 - - - 0.914 - - - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
61. acp1 ENSDARG00000076486 3275 0.914 - - - - - - 0.914 - - acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
62. crtap ENSDARG00000018010 7722 0.913 - - - - - - 0.913 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
63. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 0.912 - - - - - - 0.912 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
64. mrpl12 ENSDARG00000038768 5539 0.911 - - - - - - 0.911 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
65. sgca ENSDARG00000074156 2418 0.908 - - - - - - 0.908 - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
66. gigfy2 3194 0.906 - - - - - - 0.906 - - GRB10 interacting GYF protein 2, transcript variant X1
67. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.905 - 0.905 - - - - - - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
68. chchd1 ENSDARG00000029100 2121 0.904 - - - - - - 0.904 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
69. snrpd1 ENSDARG00000011648 8615 0.904 - - - - - - 0.904 - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
70. ppp1cb ENSDARG00000044153 4748 0.903 - - - - - - 0.903 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
71. bzw2 ENSDARG00000035918 1502 0.903 - - - - - - 0.903 - - basic leucine zipper and W2 domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-746]
72. srsf5b ENSDARG00000027734 6996 0.903 - - - - - - 0.903 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
73. calm2b 3890 0.902 - - - - - - 0.902 - - calmodulin 2b, (phosphorylase kinase, delta)
74. atp1b3b ENSDARG00000042837 5163 0.902 - 0.902 - - - - - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
75. nfe2l3 ENSDARG00000019810 3682 0.902 - 0.902 - - - - - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
76. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.902 - 0.902 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
77. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 0.902 - 0.902 - - - - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
78. murca murca 6614 0.901 - 0.901 - - - - - - -
79. postnb ENSDARG00000104267 28076 0.901 - - - - - - - - 0.901 periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
80. eif4a3 ENSDARG00000102978 16162 0.901 - 0.901 - - - - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
81. nexn ENSDARG00000057317 10972 0.901 - 0.901 - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
82. sf3b14 sf3b14 9434 0.901 - 0.901 - - - - - - -
83. cox7c ENSDARG00000104537 12169 0.901 - 0.901 - - - - - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
84. fbl ENSDARG00000053912 5891 0.901 - 0.901 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
85. safb ENSDARG00000020467 5608 0.9 - - - - - - 0.900 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
86. surf6 ENSDARG00000035427 1695 0.9 - 0.900 - - - - - - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
87. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 0.9 - - - - - - 0.900 - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
88. ndufa7 ENSDARG00000036684 6051 0.899 - 0.899 - - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
89. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 0.899 - 0.899 - - - - - - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
90. tfam ENSDARG00000063145 4524 0.899 - - - - - - 0.899 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
91. nup133 ENSDARG00000010078 2373 0.899 - 0.899 - - - - - - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
92. RABGAP1 ENSDARG00000098967 933 0.899 - 0.899 - - - - - - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
93. ube2d3 ENSDARG00000038473 4096 0.899 - 0.899 - - - - - - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
94. nomo ENSDARG00000078592 4344 0.899 - - - - - - 0.899 - - nodal modulator [Source:ZFIN;Acc:ZDB-GENE-040826-3]
95. lims2 ENSDARG00000014976 1248 0.899 - 0.899 - - - - - - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
96. rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 0.898 - 0.898 - - - - - - - retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]
97. rplp0 ENSDARG00000051783 88740 0.898 - 0.898 - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
98. psmb4 ENSDARG00000054696 8100 0.898 - 0.898 - - - - - - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
99. SERP1 ENSDARG00000076223 2528 0.898 - 0.898 - - - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
100. med10 ENSDARG00000070623 5134 0.898 - 0.898 - - - - - - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]

There are 624 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA