Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl3

Gene Name Gene ID Reads Annotation
rpl3 ENSDARG00000003599 797 ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]










Genes with expression patterns similar to rpl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl3 ENSDARG00000003599 797 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
2. nr5a2 ENSDARG00000100940 1488 1.87 - 0.999 - 0.871 - - - - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
3. mov10b.1 ENSDARG00000061177 370 1.779 - - - 0.912 - - - 0.867 - Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
4. sdad1 ENSDARG00000105117 2819 1.744 - 0.998 - - - - 0.746 - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
5. CR381676.2 CR381676.2 1591 1.739 - 0.998 - - - - 0.741 - -
6. C20H12orf57 C20H12orf57 3325 1.698 - 0.998 - - - - 0.700 - -
7. mrps2 ENSDARG00000103198 2410 1.616 - - - 0.703 - - - 0.913 - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
8. cdc123 ENSDARG00000075025 418 1.599 - - - 0.848 - - - 0.751 - cell division cycle 123 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1680]
9. si:ch73-353p21.5 si:ch73-353p21.5 568 1.593 - - - - - - 0.717 0.876 -
10. myo6a ENSDARG00000044016 847 1.544 - - - 0.829 - - 0.715 - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
11. slc43a1b ENSDARG00000037748 1406 1.516 - - - - - 0.763 - 0.753 - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
12. meis4.1a meis4.1a 1165 1.507 - - - - - 0.781 - 0.726 -
13. cant1b_1 ENSDARG00000102977 447 1.504 - - - 0.731 - - - 0.773 - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
14. slc3a2b ENSDARG00000037012 839 1.455 - - - 0.705 - - - 0.750 - solute carrier family 3 (amino acid transporter heavy chain), member 2b [Source:ZFIN;Acc:ZDB-GENE-040122-2]
15. tmem209 ENSDARG00000039340 1598 1 - 1.000 - - - - - - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
16. tdh ENSDARG00000002745 5344 1 - 1.000 - - - - - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
17. git2b ENSDARG00000042791, ENSDARG00000111846 1332 1 - 1.000 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
18. samd1a ENSDARG00000102810 1037 1 - 1.000 - - - - - - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
19. dnajc3 dnajc3 802 1 - 1.000 - - - - - - -
20. sh3bp4a ENSDARG00000020000 1049 1 - 1.000 - - - - - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
21. cep44 ENSDARG00000053106 683 1 - 1.000 - - - - - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
22. CR387996.1 ENSDARG00000097774 3037 1 - 1.000 - - - - - - -
23. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 1 - 1.000 - - - - - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
24. cped1 ENSDARG00000045747 1024 1 - 1.000 - - - - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
25. ing2 ENSDARG00000104907 1336 1 - 1.000 - - - - - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
26. foxo1b ENSDARG00000061549 790 1 - 1.000 - - - - - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
27. socs6b ENSDARG00000015863 1799 1 - 1.000 - - - - - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
28. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.999 - 0.999 - - - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
29. KLB ENSDARG00000076294 595 0.999 - 0.999 - - - - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
30. FP102892.2 FP102892.2 809 0.999 - 0.999 - - - - - - -
31. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.999 - 0.999 - - - - - - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
32. pdxkb ENSDARG00000036546 721 0.999 - 0.999 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
33. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.999 - 0.999 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
34. tuba1c ENSDARG00000055216 8384 0.999 - 0.999 - - - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
35. mao ENSDARG00000023712 1448 0.999 - 0.999 - - - - - - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
36. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 0.999 - 0.999 - - - - - - - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
37. sgut1 3470 0.999 - 0.999 - - - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
38. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 0.999 - 0.999 - - - - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
39. PLEKHG4 ENSDARG00000075964 2860 0.999 - 0.999 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
40. utp23 ENSDARG00000105012 1346 0.999 - 0.999 - - - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
41. abl1 ENSDARG00000035187 3553 0.999 - 0.999 - - - - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
42. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 0.999 - 0.999 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
43. slc38a10 ENSDARG00000077081 1691 0.999 - 0.999 - - - - - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
44. mrpl13 ENSDARG00000056903 2768 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
45. LIMA1 LIMA1 908 0.999 - 0.999 - - - - - - -
46. ppp1cab ENSDARG00000071566 4350 0.998 - 0.998 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
47. lum ENSDARG00000045580 5395 0.998 - 0.998 - - - - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
48. pgam5 ENSDARG00000035608 4044 0.998 - 0.998 - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
49. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 0.998 - 0.998 - - - - - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
50. arnt2 ENSDARG00000103697 5731 0.998 - 0.998 - - - - - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
51. TBC1D24 ENSDARG00000069339 1300 0.997 - 0.997 - - - - - - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
52. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.997 - 0.997 - - - - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
53. snrpa1 ENSDARG00000024651 3306 0.997 - 0.997 - - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
54. myh10 ENSDARG00000000103 7522 0.997 - 0.997 - - - - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
55. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 0.997 - 0.997 - - - - - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
56. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.996 - 0.996 - - - - - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
57. cstf3 ENSDARG00000018904 6111 0.995 - 0.995 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
58. igf2bp3 ENSDARG00000010266 5789 0.994 - 0.994 - - - - - - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
59. mrpl54 ENSDARG00000071468 2715 0.994 - 0.994 - - - - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
60. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 0.994 - 0.994 - - - - - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
61. tomm7 ENSDARG00000067717 4452 0.994 - 0.994 - - - - - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
62. cux1a ENSDARG00000078459 3914 0.993 - 0.993 - - - - - - - cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
63. srsf5b ENSDARG00000027734 6996 0.993 - 0.993 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
64. nhp2l1b nhp2l1b 3898 0.993 - 0.993 - - - - - - -
65. nme3 ENSDARG00000100990 3889 0.993 - 0.993 - - - - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
66. NAT16 ENSDARG00000086222 4682 0.993 - 0.993 - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
67. METTL21C METTL21C 1717 0.992 - 0.992 - - - - - - -
68. nsa2 ENSDARG00000007708 6329 0.991 - 0.991 - - - - - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
69. ivns1abpa ENSDARG00000031100 3806 0.991 - 0.991 - - - - - - - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
70. ubap1 ENSDARG00000058746 1049 0.991 - 0.991 - - - - - - - ubiquitin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-950]
71. col12a1b ENSDARG00000019601 9985 0.99 - 0.990 - - - - - - - collagen, type XII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-120215-116]
72. arih2 ENSDARG00000012848 7087 0.99 - 0.990 - - - - - - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
73. sort1b ENSDARG00000056252 2652 0.989 - 0.989 - - - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
74. dhx15 ENSDARG00000015392 7496 0.988 - 0.988 - - - - - - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
75. rbb4 rbb4 15541 0.988 - 0.988 - - - - - - -
76. mgst2 ENSDARG00000071345 5626 0.987 - 0.987 - - - - - - - microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
77. snx12 ENSDARG00000019060 9563 0.985 - 0.985 - - - - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
78. cldnc ENSDARG00000015955 3196 0.984 - 0.984 - - - - - - - claudin c [Source:ZFIN;Acc:ZDB-GENE-010328-3]
79. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 0.983 - 0.983 - - - - - - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
80. dcxr ENSDARG00000079271 3289 0.982 - 0.982 - - - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
81. atp5f1 16797 0.981 - 0.981 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
82. atp5g3a 9539 0.981 - 0.981 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
83. fstl1b ENSDARG00000039576 15992 0.98 - 0.980 - - - - - - - follistatin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3029]
84. mgea5 6076 0.978 - 0.978 - - - - - - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
85. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 0.976 - 0.976 - - - - - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
86. usp9 ENSDARG00000013708 9057 0.976 - 0.976 - - - - - - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
87. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 0.973 - 0.973 - - - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
88. suclg1 ENSDARG00000052712 17570 0.971 - 0.971 - - - - - - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
89. arl5c ENSDARG00000035719 1257 0.968 - 0.968 - - - - - - - ADP-ribosylation factor-like 5C [Source:ZFIN;Acc:ZDB-GENE-040426-1866]
90. angptl2b ENSDARG00000068369 1705 0.968 - 0.968 - - - - - - - angiopoietin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050624-1]
91. psmc2 ENSDARG00000020101 8095 0.964 - 0.964 - - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
92. tgfbi ENSDARG00000071586 17779 0.962 - 0.962 - - - - - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
93. asph ENSDARG00000055945 10835 0.962 - 0.962 - - - - - - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
94. tmed2 ENSDARG00000026908 9070 0.962 - 0.962 - - - - - - - transmembrane p24 trafficking protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-269]
95. actr2a ENSDARG00000052438 5838 0.961 - 0.961 - - - - - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
96. hars ENSDARG00000003693 7217 0.96 - 0.960 - - - - - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
97. ift57 ENSDARG00000021022 288 0.952 - - - 0.952 - - - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
98. id2a ENSDARG00000055283 7428 0.95 - 0.950 - - - - - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
99. rps26 ENSDARG00000037071 40061 0.95 - 0.950 - - - - - - - ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
100. CABZ01086041.1 ENSDARG00000019442 472 0.947 - - - - - - - 0.947 - angiomotin like 1 [Source:NCBI gene;Acc:101884950]

There are 709 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA