Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl28

Gene Name Gene ID Reads Annotation
rpl28 ENSDARG00000005791 61993 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]










Genes with expression patterns similar to rpl28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl28 ENSDARG00000005791 61993 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
2. rps16 ENSDARG00000045487 43243 2.373 0.706 - 0.729 0.938 - - - - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
3. lama2 ENSDARG00000099390 24734 2.282 0.708 - - 0.844 - 0.730 - - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
4. cox8a ENSDARG00000095273 60672 1.852 - - - 0.887 - - 0.965 - - cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
5. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 1.822 - - 0.891 0.931 - - - - - ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
6. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.76 0.852 - - - - - 0.908 - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
7. rps4x ENSDARG00000014690 88322 1.751 0.782 - - - - - 0.969 - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
8. pgam2 ENSDARG00000057571 23387 1.662 0.720 - - - - - 0.942 - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
9. sox9b ENSDARG00000043923 5375 1.658 0.781 - - - - - 0.877 - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
10. ola1 ENSDARG00000044565 22424 1.654 0.731 - - - - - 0.923 - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
11. rtn2a ENSDARG00000016088 12184 1.637 0.766 - - - - 0.871 - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
12. hdac1 ENSDARG00000015427 19804 1.633 0.707 - - - - - 0.926 - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
13. RPL29 ENSDARG00000077717 88791 1.629 0.852 - - 0.777 - - - - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
14. rplp1 ENSDARG00000021864 127841 1.625 0.813 - - - - - 0.812 - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
15. calm1b ENSDARG00000034187 13158 1.624 0.783 - - 0.841 - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
16. akap1b ENSDARG00000006062 4214 1.62 0.722 - - - - - 0.898 - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
17. rps15 ENSDARG00000070849, ENSDARG00000110979 102534 1.596 - - 0.768 0.828 - - - - - ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
18. rplp2 ENSDARG00000101406 77670 1.592 0.722 - - 0.870 - - - - - ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
19. rps27.1 ENSDARG00000023298 86382 1.583 0.873 - - - - - - - 0.710 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
20. rpl23a ENSDARG00000006316 59831 1.575 0.799 - 0.776 - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
21. eif3s6ip ENSDARG00000101082 18515 1.559 0.808 - - - - - - - 0.751 eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
22. rpl23 ENSDARG00000053457 174183 1.542 0.752 - - - - - - - 0.790 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
23. RPS17L RPS17L 51105 1.531 0.776 - 0.755 - - - - - -
24. psma6b ENSDARG00000013966 4410 1.524 0.779 - - - - - - - 0.745 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
25. zgc:77086 ENSDARG00000014015 4908 1.5 0.785 - - - - - - - 0.715 zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
26. enpp1 ENSDARG00000005789 3267 1.445 0.708 - - - - - - - 0.737 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
27. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 0.947 - - - - - - 0.947 - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
28. mef2ca ENSDARG00000029764 18547 0.946 - - - - - - 0.946 - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
29. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 0.942 - - - - - - 0.942 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
30. rps29 ENSDARG00000041232 71334 0.924 0.924 - - - - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
31. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 0.922 0.922 - - - - - - - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
32. cmn ENSDARG00000055527 14039 0.919 - - - - - - 0.919 - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
33. myoz1a ENSDARG00000056209, ENSDARG00000115885 3668 0.918 - - - - - - 0.918 - - myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
34. NDUFB1 ENSDARG00000087456 8270 0.914 - - - - - - 0.914 - - NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
35. puf60b ENSDARG00000001241 13827 0.914 - - - - - - 0.914 - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
36. eef1b2 ENSDARG00000044521 26570 0.913 0.913 - - - - - - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
37. ndufs2 ENSDARG00000007526 6516 0.912 - - - - - - 0.912 - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
38. trappc1 ENSDARG00000039005 6990 0.908 - - - - - - 0.908 - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
39. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 0.907 - - - - - - 0.907 - - prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
40. tpm4a ENSDARG00000023963 10932 0.907 - - - - - - 0.907 - - tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
41. psmb6 ENSDARG00000002240 8015 0.904 - - - - - - 0.904 - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
42. ran ENSDARG00000057026 54670 0.903 - - - - - - 0.903 - - RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
43. mtch2 ENSDARG00000019732 3948 0.902 - - - - - - 0.902 - - mitochondrial carrier homolog 2 [Source:ZFIN;Acc:ZDB-GENE-991008-9]
44. ube2d1b ENSDARG00000038576 5971 0.902 - - - - - - 0.902 - - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
45. map2k6 ENSDARG00000099184 8741 0.899 - - - - - - 0.899 - - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
46. samm50 ENSDARG00000045814 4511 0.898 - - - - - - 0.898 - - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
47. C5H8orf4 C5H8orf4 2740 0.897 - - - - - - 0.897 - -
48. fam32al fam32al 5716 0.896 - - - - - - 0.896 - -
49. rpl6 ENSDARG00000058451 82152 0.895 0.895 - - - - - - - - ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
50. wdr33 ENSDARG00000018272 4076 0.895 - - - - - - 0.895 - - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
51. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 0.895 - - - - - - 0.895 - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
52. st3gal3a ENSDARG00000015374 2360 0.894 - - - - - - 0.894 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
53. p4ha1b ENSDARG00000071082, ENSDARG00000112774 3198 0.894 - - - - - - 0.894 - - prolyl 4-hydroxylase, alpha polypeptide I b [Source:ZFIN;Acc:ZDB-GENE-030131-4089]
54. ccdc124 ENSDARG00000043502 2420 0.894 - - - - - - 0.894 - - coiled-coil domain containing 124 [Source:ZFIN;Acc:ZDB-GENE-040426-1483]
55. loxl3b ENSDARG00000039563 1657 0.893 - - - - - - 0.893 - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
56. NRD1 NRD1 3486 0.893 - - - - - - 0.893 - -
57. yars ENSDARG00000035913, ENSDARG00000113430 2043 0.893 - - - - - - 0.893 - - tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
58. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 0.893 - - - - - - 0.893 - - sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
59. si:ch211-157c3.4 ENSDARG00000087093 22736 0.892 - - - 0.892 - - - - - si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
60. stag2a ENSDARG00000011783 1588 0.892 - - - - - - 0.892 - - stromal antigen 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3432]
61. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.892 0.892 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
62. gpd1a ENSDARG00000043701 1105 0.892 - - - - - - 0.892 - - glycerol-3-phosphate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-050417-209]
63. bloc1s6 ENSDARG00000042933 2978 0.891 - - - - - - 0.891 - - biogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:ZFIN;Acc:ZDB-GENE-070112-1862]
64. sncb ENSDARG00000104945 8197 0.891 - - - - - - 0.891 - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
65. gtf2f1 ENSDARG00000032129 3041 0.891 - - - - - - 0.891 - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
66. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 0.891 - - - - - - 0.891 - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
67. ggcx ENSDARG00000067805 3812 0.891 - - - - - - 0.891 - - gamma-glutamyl carboxylase [Source:ZFIN;Acc:ZDB-GENE-030826-27]
68. inab ENSDARG00000053248 3239 0.891 - - - - - - 0.891 - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
69. pah ENSDARG00000020143 1551 0.891 - - - - - - 0.891 - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
70. rab32a ENSDARG00000029036 2157 0.891 - - - - - - 0.891 - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
71. nup133 ENSDARG00000010078 2373 0.89 - - - - - - 0.890 - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
72. zgc:65895 ENSDARG00000034086 1258 0.89 - - - - - - 0.890 - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
73. cnn2 ENSDARG00000035858 18201 0.89 - - - 0.890 - - - - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
74. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 0.89 - - - - - - 0.890 - - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
75. phf23b ENSDARG00000036305 1073 0.89 - - - - - - 0.890 - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
76. dnaja1l dnaja1l 1536 0.89 - - - - - - 0.890 - -
77. tbc1d16 ENSDARG00000036994 948 0.889 - - - - - - 0.889 - - TBC1 domain family, member 16 [Source:ZFIN;Acc:ZDB-GENE-041010-179]
78. TATDN3 ENSDARG00000044072 914 0.889 - - - - - - 0.889 - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
79. ctns ENSDARG00000008890 887 0.889 - - - - - - 0.889 - - cystinosin, lysosomal cystine transporter [Source:ZFIN;Acc:ZDB-GENE-050522-352]
80. nf2a ENSDARG00000020204 740 0.889 - - - - - - 0.889 - - neurofibromin 2a (merlin) [Source:ZFIN;Acc:ZDB-GENE-080722-7]
81. slc25a48 ENSDARG00000021250 1057 0.889 - - - - - - 0.889 - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
82. cnnm2a ENSDARG00000061195 764 0.889 - - - - - - 0.889 - - cyclin and CBS domain divalent metal cation transport mediator 2a [Source:ZFIN;Acc:ZDB-GENE-050208-36]
83. zgc:153867 35088 0.888 - - - - - - 0.888 - - zgc:153867, transcript variant X2
84. slc13a2 ENSDARG00000053853 1164 0.887 - - - - - - 0.887 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
85. asph ENSDARG00000055945 10835 0.887 - - - - - - 0.887 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
86. srsf4 ENSDARG00000105293 9657 0.887 - - - - - - - - 0.887 serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
87. caspb ENSDARG00000052039 4329 0.886 - - - - - - 0.886 - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
88. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.883 0.883 - - - - - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
89. nop56 ENSDARG00000012820 15231 0.882 - - - - - - 0.882 - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
90. phgdh ENSDARG00000001873 8325 0.88 - - - 0.880 - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
91. etf1 etf1 12861 0.878 - - - - - - 0.878 - -
92. eif3i ENSDARG00000017445 21149 0.876 0.876 - - - - - - - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
93. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.875 0.875 - - - - - - - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
94. tpd52l2a ENSDARG00000027154 4359 0.874 - - - - - - 0.874 - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
95. CWC15 ENSDARG00000013382 8969 0.874 - - - 0.874 - - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
96. atp5a1 48823 0.874 - - - - - - 0.874 - - ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
97. LGALS3 LGALS3 8665 0.874 - - - - - - 0.874 - -
98. rps25 ENSDARG00000041811 52182 0.872 0.872 - - - - - - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
99. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 0.872 - - - 0.872 - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
100. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 0.869 - - - 0.869 - - - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]

There are 499 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA