Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl27

Gene Name Gene ID Reads Annotation
rpl27 ENSDARG00000015128 108038 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]










Genes with expression patterns similar to rpl27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl27 ENSDARG00000015128 108038 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
2. si:dkey-151g10.6 si:dkey-151g10.6 344398 2.461 0.898 - 0.786 - - - - 0.777 -
3. rpl19 ENSDARG00000013307 122192 2.425 0.768 - 0.852 - - 0.805 - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
4. rps7 ENSDARG00000042566 57650 2.335 0.711 0.811 - - - - - 0.813 - ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
5. rps15a ENSDARG00000010160 94499 1.734 0.776 - - - 0.958 - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
6. rplp1 ENSDARG00000021864 127841 1.712 0.843 - - - 0.869 - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
7. ppiaa ENSDARG00000009212 290634 1.698 0.817 - - - 0.881 - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
8. rps24 ENSDARG00000039347 70399 1.697 0.833 - - - - 0.864 - - - ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
9. mrps25 ENSDARG00000041306 3654 1.678 0.700 - - - 0.978 - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
10. smyd1b ENSDARG00000091253 4964 1.656 0.813 - 0.843 - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
11. pygma ENSDARG00000055518 15972 1.616 0.800 - 0.816 - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
12. rpl11 ENSDARG00000043509 123498 1.595 - - 0.786 - - - - 0.809 - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
13. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.594 0.772 - 0.822 - - - - - -
14. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.591 0.745 - 0.846 - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
15. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 1.572 0.802 - - - - - - 0.770 - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
16. rpl18 ENSDARG00000029533 89500 1.569 - - 0.733 - - - - - 0.836 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
17. selt2 12741 1.566 - 0.710 0.856 - - - - - - selenoprotein T, 2
18. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 1.553 0.827 - - 0.726 - - - - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
19. RPL29 ENSDARG00000077717 88791 1.534 0.770 - - - - 0.764 - - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
20. tnnt2c ENSDARG00000032242 28801 1.523 0.799 - 0.724 - - - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
21. srsf2a ENSDARG00000057484 25721 1.516 - 0.701 0.815 - - - - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
22. cct5 ENSDARG00000045399 11572 1.505 0.790 - - - - 0.715 - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
23. rps25 ENSDARG00000041811 52182 1.498 0.788 - - - - 0.710 - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
24. rtn2a ENSDARG00000016088 12184 1.495 0.771 0.724 - - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
25. rps5 ENSDARG00000043453 91085 1.489 0.739 - - - - 0.750 - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
26. rps4x ENSDARG00000014690 88322 1.487 0.764 - 0.723 - - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
27. calr ENSDARG00000076290 13987 1.473 - 0.716 0.757 - - - - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
28. rps9 ENSDARG00000011405, ENSDARG00000113248 100731 1.468 0.716 - - - - - - 0.752 - ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
29. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.983 - - - - 0.983 - - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
30. rbb4 rbb4 15541 0.981 - - - - 0.981 - - - -
31. phgdh ENSDARG00000001873 8325 0.981 - - - - 0.981 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
32. anxa1a ENSDARG00000026726 23173 0.981 - - - - 0.981 - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
33. nip7 ENSDARG00000059075 3964 0.979 - - - - 0.979 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
34. ppp5c ENSDARG00000034313 8794 0.979 - - - - 0.979 - - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
35. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.979 - - - - 0.979 - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
36. atp5h 18018 0.978 - - - - 0.978 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
37. ncalda ENSDARG00000070688 5069 0.978 - - - - 0.978 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
38. furina ENSDARG00000062909, ENSDARG00000117158 6313 0.978 - - - - 0.978 - - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
39. pcgf6 ENSDARG00000069681 2382 0.978 - - - - 0.978 - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
40. snap25a ENSDARG00000020609 4537 0.978 - - - - 0.978 - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
41. nrp2a_1 ENSDARG00000096546 3358 0.978 - - - - 0.978 - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
42. taf9 ENSDARG00000077870 6992 0.978 - - - - 0.978 - - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
43. sh3kbp1 ENSDARG00000075853 2838 0.978 - - - - 0.978 - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
44. ptprnb ENSDARG00000077047 2743 0.977 - - - - 0.977 - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
45. si:dkey-191j3.3 si:dkey-191j3.3 1987 0.977 - - - - 0.977 - - - -
46. C25H1orf51 C25H1orf51 2460 0.977 - - - - 0.977 - - - -
47. six3b ENSDARG00000054879 2416 0.977 - - - - 0.977 - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
48. acyp1 ENSDARG00000060126 2161 0.977 - - - - 0.977 - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
49. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.976 - - - - 0.976 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
50. tegt ENSDARG00000077934 27182 0.976 - - - - 0.976 - - - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
51. zgc:158409 zgc:158409 21963 0.976 - - - - 0.976 - - - -
52. FOXK2 ENSDARG00000030583 5500 0.972 - - - - 0.972 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
53. anp32b ENSDARG00000023330 25013 0.969 - - - - 0.969 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
54. vps35 ENSDARG00000008224 13245 0.967 - - - - 0.967 - - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
55. capns1b ENSDARG00000013804 37726 0.959 - - - - 0.959 - - - - calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
56. znf706 ENSDARG00000056307 12518 0.958 - - - - 0.958 - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
57. sap130a ENSDARG00000056924 3156 0.958 - - - - 0.958 - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
58. fbxo28 ENSDARG00000027159 9602 0.958 - - - - 0.958 - - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
59. atp5g1 51897 0.957 - - - - 0.957 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
60. zgc:92533 zgc:92533 141172 0.932 - - - - 0.932 - - - -
61. uba52 ENSDARG00000041435 50415 0.929 - - - - 0.929 - - - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
62. rpl36 ENSDARG00000100588 115695 0.916 0.916 - - - - - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
63. ccnd1 ENSDARG00000101637 34762 0.91 - - - - 0.910 - - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
64. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 0.888 0.888 - - - - - - - - basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
65. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 0.884 - - 0.884 - - - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
66. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.88 0.880 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
67. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 0.877 - - 0.877 - - - - - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
68. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 0.872 - - 0.872 - - - - - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
69. psmc2 ENSDARG00000020101 8095 0.869 - - 0.869 - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
70. faua ENSDARG00000099022 82901 0.869 0.869 - - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
71. lsm6 ENSDARG00000036995 4377 0.869 0.869 - - - - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
72. scamp2 ENSDARG00000010279 2325 0.867 - - 0.867 - - - - - - secretory carrier membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2702]
73. rps23 ENSDARG00000021838 145026 0.867 0.867 - - - - - - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
74. rps26l ENSDARG00000030408 146322 0.866 0.866 - - - - - - - - ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
75. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 0.863 - - 0.863 - - - - - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
76. nop58 ENSDARG00000104353 8497 0.862 - - 0.862 - - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
77. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 0.862 - - - - - 0.862 - - - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
78. s100v2 ENSDARG00000070702 8645 0.86 - - 0.860 - - - - - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
79. abracl ENSDARG00000042876 10208 0.857 - - 0.857 - - - - - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
80. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 0.856 - - 0.856 - - - - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
81. PTPLA PTPLA 4044 0.855 0.855 - - - - - - - -
82. hat1 ENSDARG00000034916 5712 0.854 - - 0.854 - - - - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
83. snrpa1 ENSDARG00000024651 3306 0.854 - - 0.854 - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
84. AIMP1 ENSDARG00000060036 4136 0.853 0.853 - - - - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
85. slc1a3a ENSDARG00000104431 9888 0.852 - - 0.852 - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
86. RBM6 ENSDARG00000077060 3521 0.852 - - 0.852 - - - - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
87. si:rp71-45k5.4 ENSDARG00000035679 10411 0.852 - - 0.852 - - - - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
88. stip1 ENSDARG00000004906 7742 0.85 0.850 - - - - - - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
89. AKAP2 AKAP2 4178 0.85 - - 0.850 - - - - - -
90. vapal ENSDARG00000115862 3108 0.847 - - 0.847 - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
91. mtor ENSDARG00000053196 2156 0.846 - - 0.846 - - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
92. psmd11a ENSDARG00000060150 4529 0.845 - - 0.845 - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
93. bc2 5213 0.844 - - 0.844 - - - - - - putative breast adenocarcinoma marker
94. ddah2 ENSDARG00000105009 4570 0.844 - - 0.844 - - - - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
95. ccdc25 ENSDARG00000021753 3837 0.844 - - 0.844 - - - - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
96. hdac1 ENSDARG00000015427 19804 0.844 - - - - 0.844 - - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
97. myod1 ENSDARG00000030110 6019 0.844 0.844 - - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
98. si:ch211-152p11.4 ENSDARG00000079705 2341 0.843 - - 0.843 - - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
99. sdad1 ENSDARG00000105117 2819 0.843 - - 0.843 - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
100. CPAMD8 ENSDARG00000056530 3481 0.842 - - 0.842 - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]

There are 348 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA