Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl23a

Gene Name Gene ID Reads Annotation
rpl23a ENSDARG00000006316 59831 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]










Genes with expression patterns similar to rpl23a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl23a ENSDARG00000006316 59831 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
2. mibp2 ENSDARG00000101844 17444 3.139 0.778 - - 0.722 0.725 - 0.914 - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
3. eif3f ENSDARG00000077533 24387 3.057 - 0.737 - 0.762 0.778 0.780 - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
4. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 2.96 0.728 0.710 - - 0.728 - 0.794 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
5. eif2s3 ENSDARG00000008292 17051 2.405 0.730 - 0.878 - - - 0.797 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
6. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 2.383 0.826 0.714 - 0.843 - - - - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
7. rps28 ENSDARG00000035860 34765 2.249 0.732 - - 0.702 - - 0.815 - - ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
8. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 2.207 0.706 - - - 0.750 - 0.751 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
9. cct4 ENSDARG00000013475 23959 1.739 0.844 - - - - - 0.895 - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
10. rpl18 ENSDARG00000029533 89500 1.703 0.834 - - 0.869 - - - - - ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
11. rps5 ENSDARG00000043453 91085 1.661 0.835 - - 0.826 - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
12. RPL37A RPL37A 62256 1.656 0.797 - - 0.859 - - - - -
13. eef1b2 ENSDARG00000044521 26570 1.651 0.808 - - - - - 0.843 - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
14. drg1 ENSDARG00000039345 7545 1.648 0.711 0.937 - - - - - - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
15. rpl7 ENSDARG00000007320 81359 1.642 0.802 - - - - - 0.840 - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
16. rps23 ENSDARG00000021838 145026 1.624 0.904 - - 0.720 - - - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
17. mrps15 ENSDARG00000109289 3258 1.61 0.757 - 0.853 - - - - - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
18. mybpc2b ENSDARG00000021265 9618 1.601 0.823 - - - - - 0.778 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
19. uba52 ENSDARG00000041435 50415 1.601 - - - 0.793 - - 0.808 - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
20. tgm2a ENSDARG00000070157 4516 1.593 0.814 0.779 - - - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
21. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.592 - - - - - 0.809 0.783 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
22. pygma ENSDARG00000055518 15972 1.586 0.818 - - - - - 0.768 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
23. rpl28 ENSDARG00000005791 61993 1.575 0.799 - 0.776 - - - - - - ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
24. rps14 ENSDARG00000036629 125331 1.567 0.822 - - - - - 0.745 - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
25. nedd8 ENSDARG00000007989 3896 1.563 0.708 - 0.855 - - - - - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
26. eif3ba ENSDARG00000059654 22960 1.562 - - - 0.764 - - 0.798 - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
27. rpl13 ENSDARG00000099380 20663 1.562 0.726 - - - - - 0.836 - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
28. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 1.559 - - 0.781 - - - 0.778 - - ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
29. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.555 0.849 - - - - - 0.706 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
30. mt-cyb ENSDARG00000063924 233778 1.548 0.827 0.721 - - - - - - - cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
31. sdhdb ENSDARG00000030139 9761 1.546 0.793 - 0.753 - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
32. RPS17L RPS17L 51105 1.544 0.747 - 0.797 - - - - - -
33. rpl19 ENSDARG00000013307 122192 1.543 0.811 - - - 0.732 - - - - ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
34. efemp2a ENSDARG00000094324 39261 1.543 0.790 0.753 - - - - - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
35. lsm6 ENSDARG00000036995 4377 1.541 0.821 - - - - - 0.720 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
36. eef2l2 ENSDARG00000035256 6815 1.54 0.728 - - - - - 0.812 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
37. si:ch211-156j16.1 ENSDARG00000092035 7441 1.539 0.821 - - - - - 0.718 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
38. ndufs1 ENSDARG00000028546 5795 1.538 0.781 - - - - - 0.757 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
39. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.536 0.811 - - - - - 0.725 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
40. SPEG SPEG 4017 1.535 0.759 0.776 - - - - - - -
41. EIF4G1 EIF4G1 19676 1.535 0.728 - - - - - 0.807 - -
42. cct3 ENSDARG00000016173 15869 1.532 0.773 - - - - - 0.759 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
43. tmem161a ENSDARG00000012790 16094 1.532 0.792 - - - - - 0.740 - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
44. sar1ab ENSDARG00000033320 3984 1.531 0.810 - - - - - 0.721 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
45. klhl31 ENSDARG00000039066 13656 1.529 0.745 - - - - - 0.784 - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
46. txlnbb ENSDARG00000076241 6396 1.525 0.816 - - - - - 0.709 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
47. klhl41b ENSDARG00000006757 10762 1.525 0.822 - - - - - 0.703 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
48. eif2s1b ENSDARG00000052178 11961 1.524 - - 0.718 - - - 0.806 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
49. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.524 - 0.769 0.755 - - - - - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
50. grpel2 ENSDARG00000069421 5673 1.522 0.768 - 0.754 - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
51. myoz1b ENSDARG00000071445 13381 1.522 0.744 - - - - 0.778 - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
52. ntmt1 ENSDARG00000022399 5779 1.52 0.804 - - - - - 0.716 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
53. cox7c ENSDARG00000104537 12169 1.52 0.732 - - - - - 0.788 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
54. pfn2l ENSDARG00000012682 21690 1.518 0.782 - - - - - 0.736 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
55. gars ENSDARG00000059070 17015 1.517 - - - - 0.748 - 0.769 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
56. myod1 ENSDARG00000030110 6019 1.516 0.798 - - - - - 0.718 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
57. abce1 ENSDARG00000007216 7502 1.514 - 0.751 - - - - 0.763 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
58. sumo2b ENSDARG00000102741 18514 1.508 - - 0.767 - - - 0.741 - - small ubiquitin-like modifier 2b [Source:ZFIN;Acc:ZDB-GENE-040801-7]
59. zgc:92518 ENSDARG00000016343 3837 1.507 0.792 - - - - - 0.715 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
60. flncb ENSDARG00000018820 5595 1.506 0.806 - - - - - 0.700 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
61. gstm gstm 4064 1.504 0.790 - - - - - 0.714 - -
62. chrna1 ENSDARG00000009021 2931 1.503 0.802 - - - - - 0.701 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
63. faua ENSDARG00000099022 82901 1.501 - - 0.735 - - - 0.766 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
64. TMPO TMPO 3264 1.498 0.786 - - - - - 0.712 - -
65. fermt2 ENSDARG00000020242 9351 1.495 0.760 - - - - - 0.735 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
66. tmem47 ENSDARG00000057322 4691 1.495 0.774 - 0.721 - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
67. C1QBP ENSDARG00000039887 11186 1.495 0.789 - - - - - 0.706 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
68. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.493 0.750 - - - - - 0.743 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
69. pvalb4 ENSDARG00000024433 35736 1.492 0.786 - - - - - 0.706 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
70. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.492 0.773 - - 0.719 - - - - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
71. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 1.488 0.720 - - 0.768 - - - - - basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
72. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.485 - - - 0.742 - - 0.743 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
73. h2afy2_1 ENSDARG00000087897 9887 1.485 - 0.764 - - 0.721 - - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
74. nop56 ENSDARG00000012820 15231 1.483 0.721 - - - 0.762 - - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
75. eif3i ENSDARG00000017445 21149 1.481 0.723 - - - - - 0.758 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
76. mdh1b ENSDARG00000018008 3196 1.475 0.771 - - - - - 0.704 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
77. pbxip1a ENSDARG00000071015 4960 1.474 0.771 - - - - - 0.703 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
78. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.472 0.744 - - - - - 0.728 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
79. tmeff1b ENSDARG00000056740 11253 1.471 - - 0.728 - 0.743 - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
80. cnbpb ENSDARG00000070922 14606 1.471 0.748 - - - - - 0.723 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
81. eef1da ENSDARG00000102291 9339 1.47 - 0.745 - - - - 0.725 - - eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740]
82. hadhaa ENSDARG00000057128 2179 1.47 - - 0.721 - - - 0.749 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
83. phb ENSDARG00000057414 9551 1.469 0.716 - - - - - 0.753 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
84. ywhaba ENSDARG00000013078 42000 1.467 - - - 0.734 0.733 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
85. tceb1b 14935 1.466 0.747 - - - - - 0.719 - - transcription elongation factor B (SIII), polypeptide 1b
86. sgcd ENSDARG00000098573 4980 1.464 0.728 - - - - - 0.736 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
87. hsp90aa1.1 ENSDARG00000010478 47784 1.464 0.761 - - - - - 0.703 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
88. ALDH1L2 ENSDARG00000070230 2550 1.462 0.750 - - - - - 0.712 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
89. sdhb ENSDARG00000075768 5493 1.462 - - 0.725 - - - 0.737 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
90. cox6b2 ENSDARG00000037860 33134 1.462 0.718 - - - - - 0.744 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
91. nop58 ENSDARG00000104353 8497 1.46 0.705 - - - 0.755 - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
92. limch1a ENSDARG00000074275 2981 1.458 0.738 - - - - - 0.720 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
93. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.45 - - - 0.715 - - 0.735 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
94. timm8b ENSDARG00000055708 7291 1.447 0.700 - - - - - 0.747 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
95. eif3ea ENSDARG00000090697 14670 1.441 - - - 0.729 - - 0.712 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
96. unc45b ENSDARG00000008433 8298 1.44 0.738 - - - - - 0.702 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
97. casq1b ENSDARG00000018105 2643 1.435 0.726 - - - - - 0.709 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
98. myf6 ENSDARG00000029830 1911 1.434 0.731 - - - - - 0.703 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
99. nars ENSDARG00000061100 2948 1.433 0.703 - - - - - 0.730 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
100. camk2g1 ENSDARG00000071395 10456 1.432 - 0.710 - - - - 0.722 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1 [Source:ZFIN;Acc:ZDB-GENE-050913-146]

There are 642 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA