Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpl23

Gene Name Gene ID Reads Annotation
rpl23 ENSDARG00000053457 174183 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]










Genes with expression patterns similar to rpl23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl23 ENSDARG00000053457 174183 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
2. rps19 ENSDARG00000030602 77975 2.2 0.740 - - - - - - 0.730 0.730 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
3. rps7 ENSDARG00000042566 57650 1.701 0.848 - - 0.853 - - - - - ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
4. rpl38 ENSDARG00000006413 59590 1.691 0.857 - - - - - - - 0.834 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
5. rps5 ENSDARG00000043453 91085 1.664 0.846 - 0.818 - - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
6. rpsa ENSDARG00000019181 93440 1.659 0.762 - 0.897 - - - - - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
7. ube2e1 ENSDARG00000116649 10656 1.653 - - 0.856 - - - - - 0.797 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
8. rps4x ENSDARG00000014690 88322 1.62 0.905 - - 0.715 - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
9. rps29 ENSDARG00000041232 71334 1.613 0.848 - - - 0.765 - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
10. rps27.1 ENSDARG00000023298 86382 1.611 0.836 - - 0.775 - - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
11. tmem38a ENSDARG00000024047 41883 1.592 0.789 0.803 - - - - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
12. rpl7 ENSDARG00000007320 81359 1.59 0.791 - - 0.799 - - - - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
13. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 1.587 0.762 - - - 0.825 - - - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
14. rpl28 ENSDARG00000005791 61993 1.542 0.752 - - - - - - - 0.790 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
15. desma ENSDARG00000058656 30292 1.535 0.777 - - - - - - - 0.758 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
16. eif2s3 ENSDARG00000008292 17051 1.524 0.704 - - - - - - - 0.820 eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
17. myhz2 ENSDARG00000012944 69921 1.514 0.776 0.738 - - - - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
18. dtnba ENSDARG00000077694 5483 1.5 0.720 - - - - - - - 0.780 dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
19. rps25 ENSDARG00000041811 52182 1.495 0.768 - - 0.727 - - - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
20. si:dkey-151g10.6 si:dkey-151g10.6 344398 1.493 0.765 - - 0.728 - - - - -
21. NRAP ENSDARG00000009341 3565 1.487 0.708 - - - - - - - 0.779 nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
22. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 1.481 0.721 - - - - - - - 0.760 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
23. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.463 0.710 - - - - - - - 0.753
24. rpl36 ENSDARG00000100588 115695 1.425 0.703 - - - 0.722 - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
25. hsp90aa1.1 ENSDARG00000010478 47784 1.419 0.703 - - - - - - - 0.716 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
26. rplp2l ENSDARG00000011201 77026 0.897 - - 0.897 - - - - - - ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
27. srsf3b ENSDARG00000059360 14888 0.88 - - 0.880 - - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
28. RPL37A RPL37A 62256 0.876 0.876 - - - - - - - -
29. fbn2b ENSDARG00000098237 10835 0.874 - - 0.874 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
30. rps20 ENSDARG00000036044 121457 0.873 - - 0.873 - - - - - - ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
31. rpl17 ENSDARG00000057556 60281 0.873 0.873 - - - - - - - - ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
32. glrx ENSDARG00000028106 16225 0.872 - - 0.872 - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
33. khdrbs1b ENSDARG00000070475 18157 0.868 - - 0.868 - - - - - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
34. rpl11 ENSDARG00000043509 123498 0.868 - - - 0.868 - - - - - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
35. kazald2 ENSDARG00000078518 3062 0.867 - - 0.867 - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
36. ost4 ENSDARG00000096118 7679 0.867 - - 0.867 - - - - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
37. pdia3 ENSDARG00000102640 7239 0.865 - - 0.865 - - - - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
38. mrpl12 ENSDARG00000038768 5539 0.865 - - 0.865 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
39. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.864 - - 0.864 - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
40. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.864 - - 0.864 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
41. cops2 ENSDARG00000004785 4911 0.863 - - 0.863 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
42. mef2d ENSDARG00000040237 6144 0.863 - - 0.863 - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
43. rps23 ENSDARG00000021838 145026 0.863 0.863 - - - - - - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
44. HPCAL1 ENSDARG00000022763 2885 0.862 - - 0.862 - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
45. ash2l ENSDARG00000060392 4916 0.86 - - 0.860 - - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
46. tfdp1b ENSDARG00000016304 3071 0.86 - - 0.860 - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
47. lamtor2 ENSDARG00000039872 3250 0.86 - - 0.860 - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
48. rpl35 ENSDARG00000018334 69583 0.859 0.859 - - - - - - - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
49. blzf1 ENSDARG00000011299 2568 0.858 - - 0.858 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
50. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 0.858 - - 0.858 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
51. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 0.858 0.858 - - - - - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
52. ik ENSDARG00000004161 3132 0.858 - - 0.858 - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
53. timmdc1 ENSDARG00000053466 2179 0.857 - - 0.857 - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
54. NSMCE2 ENSDARG00000076379 2133 0.857 - - 0.857 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
55. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.857 0.857 - - - - - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
56. CABZ01029822.1 ENSDARG00000086931 1654 0.857 - - 0.857 - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
57. rplp1 ENSDARG00000021864 127841 0.857 0.857 - - - - - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
58. smo ENSDARG00000002952 6411 0.857 - - 0.857 - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
59. eif2ak3 ENSDARG00000062139 3276 0.857 - - 0.857 - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
60. si:dkey-177p2.6 ENSDARG00000042322 2783 0.856 - - 0.856 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
61. toporsb ENSDARG00000105028 1898 0.856 - - 0.856 - - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
62. smarcal1 ENSDARG00000102265 1921 0.856 - - 0.856 - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
63. commd4 ENSDARG00000061946 3281 0.856 - - 0.856 - - - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
64. mpz ENSDARG00000038609 1740 0.856 - - 0.856 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
65. fmr1 ENSDARG00000037433 5132 0.855 - - 0.855 - - - - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
66. bdh1 ENSDARG00000059388 3390 0.855 - - 0.855 - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
67. dlx3b ENSDARG00000014626 3647 0.854 - - 0.854 - - - - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
68. tnni2a.4 ENSDARG00000029069 122344 0.852 0.852 - - - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
69. rplp0 ENSDARG00000051783 88740 0.851 0.851 - - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
70. cap2 ENSDARG00000104478 3266 0.851 0.851 - - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
71. aurkb ENSDARG00000037640 4874 0.85 - - 0.850 - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
72. murca murca 6614 0.85 0.850 - - - - - - - -
73. si:ch73-138n13.1 ENSDARG00000075349 4411 0.848 - - 0.848 - - - - - - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
74. rpl15 ENSDARG00000009285 81944 0.847 0.847 - - - - - - - - ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
75. arhgap1 ENSDARG00000024324 6904 0.847 - - 0.847 - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
76. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 0.847 - - 0.847 - - - - - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
77. pgam2 ENSDARG00000057571 23387 0.844 0.844 - - - - - - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
78. zgc:92061 zgc:92061 21304 0.843 - - 0.843 - - - - - -
79. hmga2 ENSDARG00000069912 20402 0.843 - - 0.843 - - - - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
80. lsm6 ENSDARG00000036995 4377 0.843 0.843 - - - - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
81. rpl23a ENSDARG00000006316 59831 0.843 0.843 - - - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
82. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 0.842 - - 0.842 - - - - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
83. PTPLA PTPLA 4044 0.838 0.838 - - - - - - - -
84. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 0.838 0.838 - - - - - - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
85. fkbp1aa ENSDARG00000022684 74052 0.835 - - - - - - - - 0.835 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
86. cnbpa ENSDARG00000045776 8648 0.834 0.834 - - - - - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
87. ppiaa ENSDARG00000009212 290634 0.833 0.833 - - - - - - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
88. RPL29 ENSDARG00000077717 88791 0.832 0.832 - - - - - - - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
89. erh ENSDARG00000032866 20633 0.832 - - 0.832 - - - - - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
90. mrpl22 ENSDARG00000109961 1374 0.83 0.830 - - - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
91. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 0.829 - - 0.829 - - - - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
92. ywhabb ENSDARG00000075758 23104 0.829 - - 0.829 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
93. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 0.827 0.827 - - - - - - - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
94. znf865 ENSDARG00000036698 15532 0.827 - - 0.827 - - - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
95. alpk2 ENSDARG00000079637 1483 0.825 0.825 - - - - - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
96. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 0.825 0.825 - - - - - - - - ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
97. nexn ENSDARG00000057317 10972 0.823 0.823 - - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
98. slc8a3 ENSDARG00000004931 338 0.82 0.820 - - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
99. acta1b ENSDARG00000055618 195597 0.819 0.819 - - - - - - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
100. limch1a ENSDARG00000074275 2981 0.817 0.817 - - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]

There are 318 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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