Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpl21

Gene Name Gene ID Reads Annotation
rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]










Genes with expression patterns similar to rpl21

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl21 ENSDARG00000010516, ENSDARG00000110263 152264 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
2. rpl10a ENSDARG00000042905, ENSDARG00000115649 202994 2.46 0.801 - 0.901 - 0.758 - - - - ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
3. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 2.382 0.874 - - - 0.758 - 0.750 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
4. rps15a ENSDARG00000010160 94499 2.33 0.789 0.820 - - - - - 0.721 - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
5. rps23 ENSDARG00000021838 145026 1.716 0.842 - - - - - 0.874 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
6. rpsa ENSDARG00000019181 93440 1.563 0.794 - - - - - 0.769 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
7. rpl27 ENSDARG00000015128 108038 1.553 0.827 - - 0.726 - - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
8. rps10 ENSDARG00000034897 71395 1.548 0.712 - - - 0.836 - - - - ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
9. si:dkey-151g10.6 si:dkey-151g10.6 344398 1.543 0.834 - - - - - - - 0.709
10. tmem161a ENSDARG00000012790 16094 1.54 0.730 0.810 - - - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
11. btf3 ENSDARG00000035400, ENSDARG00000116462 147506 1.531 0.819 - 0.712 - - - - - - basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
12. tnni2b.1 ENSDARG00000035958 51597 1.524 0.751 - - - - - 0.773 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
13. rps29 ENSDARG00000041232 71334 1.493 0.708 - - - 0.785 - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
14. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 1.434 - - - - - 0.708 0.726 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
15. tnni1al 8272 1.426 0.713 - - - - - 0.713 - - troponin I, skeletal, slow like, transcript variant X1
16. unc45b ENSDARG00000008433 8298 1.416 0.706 - 0.710 - - - - - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
17. rpl26 ENSDARG00000102317 154515 0.888 0.888 - - - - - - - - ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
18. acta1b ENSDARG00000055618 195597 0.884 0.884 - - - - - - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
19. rpl7 ENSDARG00000007320 81359 0.884 0.884 - - - - - - - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
20. aldoab ENSDARG00000034470 88942 0.878 0.878 - - - - - - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
21. mylz3 ENSDARG00000017441 303597 0.873 0.873 - - - - - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
22. ckmb ENSDARG00000040565 505935 0.868 0.868 - - - - - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
23. myl1 ENSDARG00000014196 98943 0.863 0.863 - - - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
24. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 0.86 0.860 - - - - - - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
25. rps26l ENSDARG00000030408 146322 0.857 0.857 - - - - - - - - ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
26. tmem38a ENSDARG00000024047 41883 0.851 0.851 - - - - - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
27. tpm2 ENSDARG00000104682 36853 0.85 0.850 - - - - - - - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
28. myhz1.3 ENSDARG00000067997 155509 0.848 0.848 - - - - - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
29. ckma ENSDARG00000035327, ENSDARG00000114671 418792 0.845 0.845 - - - - - - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
30. rps14 ENSDARG00000036629 125331 0.843 0.843 - - - - - - - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
31. rps6 ENSDARG00000019778 87546 0.842 0.842 - - - - - - - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
32. mt-co2 ENSDARG00000063908 621861 0.841 0.841 - - - - - - - - cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
33. rps24 ENSDARG00000039347 70399 0.841 - - - - - - - - 0.841 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
34. hsp90aa1.1 ENSDARG00000010478 47784 0.834 0.834 - - - - - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
35. tnnt2c ENSDARG00000032242 28801 0.834 0.834 - - - - - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
36. rpl5a ENSDARG00000020197 35209 0.833 - 0.833 - - - - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
37. rps4x ENSDARG00000014690 88322 0.833 0.833 - - - - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
38. ttnb ttnb 73721 0.832 0.832 - - - - - - - -
39. rplp1 ENSDARG00000021864 127841 0.832 0.832 - - - - - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
40. zgc:66286 zgc:66286 118947 0.826 0.826 - - - - - - - -
41. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 0.825 0.825 - - - - - - - - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
42. rpl23 ENSDARG00000053457 174183 0.825 0.825 - - - - - - - - ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
43. desma ENSDARG00000058656 30292 0.824 0.824 - - - - - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
44. tpma ENSDARG00000033683 752432 0.824 0.824 - - - - - - - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
45. rpl36 ENSDARG00000100588 115695 0.823 0.823 - - - - - - - - ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
46. rps9 ENSDARG00000011405, ENSDARG00000113248 100731 0.822 0.822 - - - - - - - - ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
47. smyd1b ENSDARG00000091253 4964 0.821 0.821 - - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
48. mrpl22 ENSDARG00000109961 1374 0.82 0.820 - - - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
49. acta1a ENSDARG00000036371 137508 0.819 0.819 - - - - - - - - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
50. myhz2 ENSDARG00000012944 69921 0.818 0.818 - - - - - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
51. mef2ca ENSDARG00000029764 18547 0.815 0.815 - - - - - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
52. BX511252.1 BX511252.1 59309 0.815 - - 0.815 - - - - - -
53. tnni2a.4 ENSDARG00000029069 122344 0.814 0.814 - - - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
54. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 0.81 0.810 - - - - - - - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
55. mt-nd3 ENSDARG00000063914 62872 0.81 - - - - - - 0.810 - - NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
56. atp2a1 ENSDARG00000020574 291561 0.807 0.807 - - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
57. cap2 ENSDARG00000104478 3266 0.807 0.807 - - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
58. murca murca 6614 0.804 0.804 - - - - - - - -
59. ak1 ENSDARG00000001950 26964 0.801 0.801 - - - - - - - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
60. mt-nd2 ENSDARG00000063899 553982 0.801 0.801 - - - - - - - - NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
61. lsm6 ENSDARG00000036995 4377 0.801 0.801 - - - - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
62. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 0.8 0.800 - - - - - - - - parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
63. ldb3b ENSDARG00000099974 33615 0.8 0.800 - - - - - - - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
64. casq2 ENSDARG00000008982 21802 0.798 0.798 - - - - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
65. calm1b ENSDARG00000034187 13158 0.797 0.797 - - - - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
66. klhl41b ENSDARG00000006757 10762 0.797 0.797 - - - - - - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
67. kpnb1 ENSDARG00000104889 9282 0.796 - - - - 0.796 - - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
68. cav3 ENSDARG00000024141 14906 0.792 0.792 - - - - - - - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
69. pgam2 ENSDARG00000057571 23387 0.792 0.792 - - - - - - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
70. si:ch211-156j16.1 ENSDARG00000092035 7441 0.792 0.792 - - - - - - - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
71. rplp0 ENSDARG00000051783 88740 0.792 0.792 - - - - - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
72. ank1 ank1 5209 0.792 0.792 - - - - - - - -
73. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 0.791 0.791 - - - - - - - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
74. seta ENSDARG00000031495 39977 0.791 - - - - - - 0.791 - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
75. myod1 ENSDARG00000030110 6019 0.791 0.791 - - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
76. mybpc2b ENSDARG00000021265 9618 0.79 0.790 - - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
77. eif5a ENSDARG00000017235 108602 0.79 0.790 - - - - - - - - eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
78. rpl35 ENSDARG00000018334 69583 0.789 - - - - - - 0.789 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
79. rpl9 ENSDARG00000037350, ENSDARG00000112384 136513 0.787 0.787 - - - - - - - - ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
80. rps5 ENSDARG00000043453 91085 0.787 0.787 - - - - - - - - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
81. NAT16 ENSDARG00000086222 4682 0.787 0.787 - - - - - - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
82. tnnt3a ENSDARG00000030270 112506 0.785 0.785 - - - - - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
83. stac3 ENSDARG00000098883 1765 0.782 0.782 - - - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
84. nfya ENSDARG00000042004, ENSDARG00000114231 6606 0.782 - - - - 0.782 - - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
85. mt-co3 ENSDARG00000063912 398919 0.779 0.779 - - - - - - - - cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
86. TMPO TMPO 3264 0.779 0.779 - - - - - - - -
87. rpl23a ENSDARG00000006316 59831 0.778 0.778 - - - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
88. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.776 - - - - - - 0.776 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
89. DUSP27 ENSDARG00000099889 1197 0.775 0.775 - - - - - - - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
90. rpl38 ENSDARG00000006413 59590 0.774 0.774 - - - - - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
91. txlnbb ENSDARG00000076241 6396 0.774 0.774 - - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
92. tmsb ENSDARG00000054911 6411 0.773 0.773 - - - - - - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
93. rpl18 ENSDARG00000029533 89500 0.769 0.769 - - - - - - - - ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
94. TUBA1A ENSDARG00000001889 25294 0.769 - - - - 0.769 - - - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
95. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 0.769 0.769 - - - - - - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
96. fitm1 ENSDARG00000056464 1759 0.768 0.768 - - - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
97. trim55a ENSDARG00000029596 2858 0.768 0.768 - - - - - - - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
98. tgm2a ENSDARG00000070157 4516 0.768 0.768 - - - - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
99. murcb murcb 13655 0.765 0.765 - - - - - - - -
100. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.765 0.765 - - - - - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]

There are 159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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