Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl18

Gene Name Gene ID Reads Annotation
rpl18 ENSDARG00000029533 89500 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]










Genes with expression patterns similar to rpl18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl18 ENSDARG00000029533 89500 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
2. rps23 ENSDARG00000021838 145026 2.387 0.835 - - 0.725 - 0.827 - - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
3. rps5 ENSDARG00000043453 91085 2.378 0.716 - - 0.880 - - - 0.782 - ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
4. rps4x ENSDARG00000014690 88322 2.313 0.772 - 0.804 0.737 - - - - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
5. rps12 ENSDARG00000036875, ENSDARG00000115157 92636 1.854 0.922 - - 0.932 - - - - - ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
6. rpsa ENSDARG00000019181 93440 1.744 0.894 - - - - - - - 0.850 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
7. rps6 ENSDARG00000019778 87546 1.707 - - - - - 0.730 0.977 - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
8. rpl23a ENSDARG00000006316 59831 1.703 0.834 - - 0.869 - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
9. desma ENSDARG00000058656 30292 1.669 - - - - - 0.747 0.922 - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
10. tmod4 ENSDARG00000020890 17436 1.638 - - - - - 0.711 0.927 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
11. tpm2 ENSDARG00000104682 36853 1.612 0.717 - - - - - 0.895 - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
12. nme2b.2 ENSDARG00000099420 70588 1.601 0.834 - - - - 0.767 - - - NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
13. eif3f ENSDARG00000077533 24387 1.594 - - - 0.774 - 0.820 - - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
14. rpl27 ENSDARG00000015128 108038 1.569 - - 0.733 - - - - - 0.836 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
15. eif5a ENSDARG00000017235 108602 1.543 0.756 - - 0.787 - - - - - eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
16. rps16 ENSDARG00000045487 43243 1.527 0.796 - - - - - 0.731 - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
17. atp5f1 16797 1.505 0.753 - - - - - - - 0.752 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
18. rps14 ENSDARG00000036629 125331 1.486 0.770 - - 0.716 - - - - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
19. rpl11 ENSDARG00000043509 123498 1.473 0.758 - 0.715 - - - - - - ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
20. rplp1 ENSDARG00000021864 127841 1.404 0.701 - - 0.703 - - - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
21. rps15 ENSDARG00000070849, ENSDARG00000110979 102534 0.918 - - - - - - 0.918 - - ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
22. RPL29 ENSDARG00000077717 88791 0.915 - - - - - - 0.915 - - ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
23. COL22A1 COL22A1 4473 0.902 - - - - - 0.902 - - -
24. rps24 ENSDARG00000039347 70399 0.898 - - - 0.898 - - - - - ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
25. tnnt2c ENSDARG00000032242 28801 0.895 - - - - - 0.895 - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
26. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.89 - - - - - 0.890 - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
27. rps27.1 ENSDARG00000023298 86382 0.889 - - - - - - 0.889 - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
28. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 0.889 - - - - - 0.889 - - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
29. pbxip1a ENSDARG00000071015 4960 0.888 - - - - - 0.888 - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
30. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 0.888 - - - - - 0.888 - - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
31. jph1b ENSDARG00000038826 7416 0.887 - - - - - 0.887 - - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
32. GPANK1 ENSDARG00000053995 1535 0.886 - - - - - 0.886 - - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
33. pfdn1 ENSDARG00000014536 6969 0.886 - - - - - 0.886 - - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
34. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 0.886 - - - - - 0.886 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
35. ywhah ENSDARG00000005560 11079 0.883 - - - - - 0.883 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
36. tomm7 ENSDARG00000067717 4452 0.883 - - - - - 0.883 - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
37. marcksl1a ENSDARG00000039034 37303 0.882 - - - - - - 0.882 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
38. vash2 ENSDARG00000007774 2537 0.88 - - - - - 0.880 - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
39. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 0.878 - - - - - 0.878 - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
40. ak1 ENSDARG00000001950 26964 0.878 0.878 - - - - - - - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
41. dyrk2 ENSDARG00000094646 2163 0.877 - - - - - 0.877 - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
42. cry2a cry2a 2728 0.876 - - - - - 0.876 - - -
43. vapb ENSDARG00000070435, ENSDARG00000112097 6469 0.876 - - - - - 0.876 - - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
44. atp5h 18018 0.876 - - - - - - 0.876 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
45. znf385b ENSDARG00000006065 817 0.876 - - - - - 0.876 - - - zinc finger protein 385B [Source:ZFIN;Acc:ZDB-GENE-030616-154]
46. CPEB4 CPEB4 3249 0.876 - - - - - 0.876 - - -
47. eif4ebp3l ENSDARG00000041607 5257 0.875 - - - - - 0.875 - - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
48. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 0.874 - - - - - 0.874 - - - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
49. FNDC4 FNDC4 750 0.874 - - - - - 0.874 - - -
50. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 0.873 - - - - - 0.873 - - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
51. kal1a kal1a 684 0.873 - - - - - 0.873 - - -
52. ezra ENSDARG00000020944 3105 0.873 - - - - - 0.873 - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
53. aqr ENSDARG00000016775 1581 0.873 - - - - - 0.873 - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
54. ppp1r3cb ENSDARG00000014554 2507 0.872 - - - - - 0.872 - - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
55. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 0.872 - - - - - 0.872 - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
56. tjp1a ENSDARG00000077506 2658 0.872 - - - - - 0.872 - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
57. cercam ENSDARG00000079049, ENSDARG00000109573 2228 0.872 - - - - - 0.872 - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
58. CU929119.2 CU929119.2 859 0.871 - - - - - 0.871 - - -
59. dmxl2 ENSDARG00000091293 1593 0.87 - - - - - 0.870 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
60. ZNF70_2 ZNF70_2 1866 0.87 - - - - - 0.870 - - -
61. cd81 cd81 44833 0.87 0.870 - - - - - - - -
62. meaf6 ENSDARG00000101216 6865 0.87 - - - - - 0.870 - - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
63. tmem223 ENSDARG00000069494 1528 0.87 - - - - - 0.870 - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
64. CABZ01041804.1 CABZ01041804.1 312 0.87 - - - - - 0.870 - - -
65. sox21b ENSDARG00000008540 1460 0.87 - - - - - 0.870 - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
66. mplkip ENSDARG00000078986 1316 0.869 - - - - - 0.869 - - - M-phase specific PLK1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-070912-182]
67. zgc:172120 ENSDARG00000069199 278 0.869 - - - - - 0.869 - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
68. ptrh1 ENSDARG00000098206, ENSDARG00000110279 1001 0.869 - - - - - 0.869 - - - peptidyl-tRNA hydrolase 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050306-33]
69. SATB1 SATB1 928 0.869 - - - - - 0.869 - - -
70. RPAP3 ENSDARG00000087962 946 0.869 - - - - - 0.869 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
71. megf11 ENSDARG00000062686 230 0.868 - - - - - 0.868 - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
72. map1lc3b ENSDARG00000101127 3958 0.868 - - - - - 0.868 - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
73. fos fos 817 0.868 - - - - - 0.868 - - -
74. BCR ENSDARG00000079286 389 0.868 - - - - - 0.868 - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
75. ano10b ENSDARG00000018159 535 0.868 - - - - - 0.868 - - - anoctamin 10b [Source:ZFIN;Acc:ZDB-GENE-061013-169]
76. KCNV1 ENSDARG00000070092 301 0.868 - - - - - 0.868 - - - potassium voltage-gated channel modifier subfamily V member 1 [Source:HGNC Symbol;Acc:HGNC:18861]
77. creb3l1 ENSDARG00000015793 1988 0.868 - - - - - 0.868 - - - cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
78. phlda3 ENSDARG00000037804 1116 0.868 - - - - - 0.868 - - - pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
79. CABZ01079490.1 CABZ01079490.1 1808 0.868 - - - - - 0.868 - - -
80. CHST15 ENSDARG00000074527 210 0.868 - - - - - 0.868 - - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
81. GJD2 GJD2 1351 0.867 - - - - - 0.867 - - -
82. zfand6 ENSDARG00000098443 2507 0.867 - - - - - 0.867 - - - zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
83. PYURF ENSDARG00000045773 4576 0.867 - - - - - 0.867 - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
84. elmo1 ENSDARG00000098753 6966 0.867 - - - - - 0.867 - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
85. PDZD8 ENSDARG00000088699 844 0.867 - - - - - 0.867 - - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
86. crb3b ENSDARG00000068182 683 0.867 - - - - - 0.867 - - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
87. mfsd10 ENSDARG00000086786 304 0.867 - - - - - 0.867 - - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
88. gnai2a ENSDARG00000018174 6549 0.867 - - - - - 0.867 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8365]
89. si:dkey-9i23.11 si:dkey-9i23.11 3818 0.867 - - - - - 0.867 - - -
90. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 0.867 - - - - - 0.867 - - - succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
91. cpe ENSDARG00000055874, ENSDARG00000116033 2981 0.866 - - - - - 0.866 - - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
92. GOLM1 GOLM1 1845 0.866 - - - - - 0.866 - - -
93. minos1 ENSDARG00000101619 5273 0.866 - - - - - 0.866 - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
94. atp6v1aa ENSDARG00000034534, ENSDARG00000113437 1443 0.866 - - - - - 0.866 - - - ATPase H+ transporting V1 subunit Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1143]
95. sdhb ENSDARG00000075768 5493 0.866 - - - - - 0.866 - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
96. rb1 ENSDARG00000006782 1445 0.866 - - - - - 0.866 - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
97. birc2 ENSDARG00000044619, ENSDARG00000117094 1376 0.866 - - - - - 0.866 - - - baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]
98. irf2bp2a ENSDARG00000004702 6719 0.865 - - - - - 0.865 - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
99. syne2b ENSDARG00000053484 9225 0.865 - - - - - 0.865 - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
100. kif1b ENSDARG00000037020 2124 0.865 - - - - - 0.865 - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]

There are 228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA