Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpl13a

Gene Name Gene ID Reads Annotation
rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]










Genes with expression patterns similar to rpl13a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
2. gpx4b ENSDARG00000076836 8085 2.703 - 0.899 - 0.961 - - 0.843 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
3. rps17 ENSDARG00000104011 27028 2.648 - - - 0.937 - 0.964 0.747 - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
4. ndufv2 ENSDARG00000013044 3758 2.571 - 0.798 - - - 0.990 0.783 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
5. lmnb1 ENSDARG00000044299 9817 2.54 - 0.864 - 0.959 - - 0.717 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
6. nt5c2b ENSDARG00000058231 3822 1.96 - - - 0.979 - 0.981 - - - 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
7. uba52 ENSDARG00000041435 50415 1.923 - - - - 0.956 - 0.967 - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
8. hmgb2b ENSDARG00000053990 11519 1.907 - - - 0.930 - 0.977 - - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
9. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.883 - - - - - 0.950 0.933 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
10. pdcd4a ENSDARG00000021702 7293 1.87 - - - 0.980 - - 0.890 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
11. hnrpdl 14288 1.866 - - - 0.955 - 0.911 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
12. stxbp3 ENSDARG00000008142 2604 1.856 - - - - - 0.988 0.868 - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
13. hadhb ENSDARG00000102055 9700 1.856 - - - 0.978 - - 0.878 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
14. phb ENSDARG00000057414 9551 1.848 - - - - - 0.963 0.885 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
15. cox6c ENSDARG00000038577 16845 1.84 - - - 0.916 - - 0.924 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
16. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.831 - - - - - 0.991 0.840 - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
17. psmb4 ENSDARG00000054696 8100 1.831 - - - - - 0.982 0.849 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
18. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.812 - - - 0.821 - 0.991 - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
19. impdh2 ENSDARG00000006900 3197 1.809 - - - - - 0.983 0.826 - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
20. hypk ENSDARG00000059725 20584 1.808 - - - - - 0.901 0.907 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
21. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.805 - - - 0.978 - - 0.827 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
22. abat ENSDARG00000006031 2143 1.801 - 0.816 - - - 0.985 - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
23. txn2 ENSDARG00000034777 4071 1.8 - - - - - 0.983 0.817 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
24. angptl4 ENSDARG00000035859 2701 1.798 - - - 0.986 - - 0.812 - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
25. mt-nd5 ENSDARG00000063921 21268 1.794 - - - - - 0.905 0.889 - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
26. Sep-02 Sep-02 10074 1.79 - 0.914 - - - - 0.876 - -
27. ndufa11 ENSDARG00000042777 2757 1.782 - - - - - 0.987 0.795 - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
28. mcts1 ENSDARG00000025972 4662 1.782 - 0.791 - - - 0.991 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
29. pcmt ENSDARG00000015201 5132 1.781 - - - - - 0.975 0.806 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
30. ociad1 ENSDARG00000052334 2797 1.778 - - - - - 0.989 0.789 - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
31. eif3ha ENSDARG00000102452 9238 1.772 - - - 0.982 - - 0.790 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
32. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.771 - - - 0.985 - - 0.786 - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
33. taf10 ENSDARG00000068641 3333 1.761 - - - 0.975 - - 0.786 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
34. taf9 ENSDARG00000077870 6992 1.758 - - - - 0.999 - 0.759 - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
35. meis3 ENSDARG00000002795 2509 1.758 - 0.778 - 0.980 - - - - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
36. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.757 - - - 0.828 - - 0.929 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
37. snrpc ENSDARG00000009871 9567 1.755 - - - - - 0.972 0.783 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
38. vps35 ENSDARG00000008224 13245 1.755 - - - - 0.990 - 0.765 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
39. ktn1 ENSDARG00000032802 6251 1.754 - 0.891 - - - - 0.863 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
40. ube2v2 ENSDARG00000028198 23341 1.75 - 0.886 - - - - 0.864 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
41. napa napa 4444 1.746 - - - 0.986 - - 0.760 - -
42. ltv1 ENSDARG00000008490 2403 1.743 - 0.916 - - - - 0.827 - - LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
43. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.743 - 0.782 - - - 0.961 - - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
44. casq1b ENSDARG00000018105 2643 1.738 - - - - - 0.987 0.751 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
45. tcf7l1a ENSDARG00000038159 2288 1.736 - 0.747 - - - 0.989 - - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
46. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.735 - - - - 0.999 - 0.736 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
47. serpinf1 ENSDARG00000069048 2083 1.734 - - - - - 0.988 0.746 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
48. flot2b ENSDARG00000069774 2831 1.727 - 0.736 - - - 0.991 - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
49. sh3kbp1 ENSDARG00000075853 2838 1.726 - - - - 0.999 - 0.727 - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
50. nfe2l2a ENSDARG00000042824 1707 1.724 - 0.739 - - - 0.985 - - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
51. naa15a ENSDARG00000003213 5889 1.724 - 0.879 - - - - 0.845 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
52. ARFGAP1 ENSDARG00000101616 2952 1.723 - - - 0.981 - - 0.742 - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
53. rhebl1 ENSDARG00000039162 3966 1.72 - - - - - 0.992 0.728 - - Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
54. abi1a ENSDARG00000010155 5631 1.72 - 0.816 - - - 0.904 - - - abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
55. PSIP1 PSIP1 5252 1.711 - - - - - 0.992 0.719 - -
56. ide ENSDARG00000075570 4331 1.71 - - - - - 0.987 0.723 - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
57. pdhb ENSDARG00000021346 9088 1.709 - 0.785 - - - 0.924 - - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
58. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 1.708 - - - - - 0.985 0.723 - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
59. usp4 ENSDARG00000014770 1684 1.702 - - - 0.984 - - 0.718 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
60. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.697 - - - - - 0.776 0.921 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
61. BX324201.1 BX324201.1 3302 1.697 - - - - - 0.959 0.738 - -
62. COL22A1 COL22A1 4473 1.696 - - - 0.979 - - 0.717 - -
63. farsb ENSDARG00000016864 6776 1.692 - 0.889 - - - - 0.803 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
64. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 1.692 - 0.709 - 0.983 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
65. faua ENSDARG00000099022 82901 1.681 - - - 0.778 - - 0.903 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
66. atpif1b 8625 1.671 - 0.825 - - - - 0.846 - - ATPase inhibitory factor 1b
67. rplp1 ENSDARG00000021864 127841 1.67 - - - - 0.853 0.817 - - - ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
68. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.668 - 0.896 - - - - 0.772 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
69. atp5o 10343 1.665 - - - - - - 0.933 - 0.732 ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
70. prps1a ENSDARG00000015524 23738 1.664 - - - 0.870 - 0.794 - - - phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
71. stmn1a ENSDARG00000004169 21169 1.664 - - - 0.929 - - 0.735 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
72. ube2na ENSDARG00000008748 4273 1.658 - 0.871 - - - - 0.787 - - ubiquitin-conjugating enzyme E2Na [Source:ZFIN;Acc:ZDB-GENE-040426-2873]
73. hif1al ENSDARG00000100826 18627 1.657 - - - 0.957 - - 0.700 - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
74. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 1.651 - - - - - - 0.852 - 0.799 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
75. ryr1b ENSDARG00000023797 5693 1.64 - - - - - 0.928 0.712 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
76. znf346 ENSDARG00000060695 3942 1.639 - 0.775 - - - - 0.864 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
77. uqcrfs1_1 ENSDARG00000007745 2687 1.634 - 0.898 - - - - 0.736 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
78. psma4 ENSDARG00000045928 5112 1.63 - 0.792 - - - - 0.838 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
79. ube2a ENSDARG00000098466 12765 1.626 - 0.820 - - - - 0.806 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
80. atp5l ENSDARG00000011841 32098 1.622 - - - 0.882 - - - - 0.740 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g [Source:ZFIN;Acc:ZDB-GENE-030131-5177]
81. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.61 - 0.808 - - - - 0.802 - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
82. vgll4b ENSDARG00000103730 5266 1.61 - 0.790 - - - - 0.820 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
83. C22H19orf70 C22H19orf70 4393 1.608 - 0.820 - - - - 0.788 - -
84. eif2s2 ENSDARG00000053047 15904 1.605 - - 0.703 - - - 0.902 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
85. stip1 ENSDARG00000004906 7742 1.603 - 0.760 - - - - 0.843 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
86. rps14 ENSDARG00000036629 125331 1.6 - - - - - 0.706 0.894 - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
87. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.598 - 0.798 - - - - 0.800 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
88. ndufb11 ENSDARG00000043467 7495 1.598 - - - - - - 0.862 - 0.736 NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
89. caprin1b ENSDARG00000054272 7033 1.596 - 0.819 - - - - 0.777 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
90. cox6a1 ENSDARG00000022438 18811 1.587 - - - - - - 0.862 - 0.725 cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
91. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.586 - 0.760 - - - - 0.826 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
92. hadhaa ENSDARG00000057128 2179 1.581 - 0.803 - - - - 0.778 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
93. gar1 ENSDARG00000076526, ENSDARG00000116188 3408 1.573 - 0.850 - - - - 0.723 - - GAR1 homolog, ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-040426-893]
94. mrpl34 ENSDARG00000092954 2052 1.572 - 0.782 - - - - 0.790 - - mitochondrial ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-070912-582]
95. blcap ENSDARG00000052073 8646 1.567 - 0.807 - - - - 0.760 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
96. rhoac ENSDARG00000116058 9256 1.566 - 0.840 - - - - 0.726 - - ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
97. nup50 ENSDARG00000017454 4425 1.563 - 0.844 - - - - 0.719 - - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
98. NDNF ENSDARG00000062936 7287 1.559 - 0.803 - - - - 0.756 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
99. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.553 - 0.819 - - - - 0.734 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
100. atp5ia 4773 1.544 - 0.771 - - - - 0.773 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea

There are 1237 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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