Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl13

Gene Name Gene ID Reads Annotation
rpl13 ENSDARG00000099380 20663 ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]










Genes with expression patterns similar to rpl13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl13 ENSDARG00000099380 20663 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
2. eif2s3 ENSDARG00000008292 17051 2.584 0.756 - - 0.973 - - 0.855 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
3. serbp1a ENSDARG00000074242 10818 2.564 0.721 - - 0.968 - 0.875 - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
4. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 2.453 0.729 0.864 - - 0.860 - - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
5. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 2.438 0.700 0.791 - - - 0.947 - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
6. mibp2 ENSDARG00000101844 17444 2.435 0.712 - - - - 0.825 0.898 - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
7. EIF4G1 EIF4G1 19676 2.385 0.807 - - - - 0.708 0.870 - -
8. cox6b2 ENSDARG00000037860 33134 2.383 0.820 - - 0.741 - 0.822 - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
9. zgc:100919 zgc:100919 7746 2.377 - - - 0.964 - 0.707 0.706 - -
10. rpl5a ENSDARG00000020197 35209 1.819 0.871 - - 0.948 - - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
11. smc1al ENSDARG00000058203 8838 1.798 - - - 0.960 0.838 - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
12. rps11 ENSDARG00000053058 16233 1.792 - - - - 0.915 0.877 - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
13. eef1b2 ENSDARG00000044521 26570 1.774 0.899 - - - - - 0.875 - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
14. cnbpa ENSDARG00000045776 8648 1.765 0.889 - - - - - 0.876 - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
15. ndufb6 ENSDARG00000037259 6515 1.749 - - - - - 0.817 0.932 - - NADH:ubiquinone oxidoreductase subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1781]
16. cycsb ENSDARG00000044562 40227 1.737 - - - - - 0.880 0.857 - - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
17. tomm5 ENSDARG00000068265 11813 1.731 0.754 - - 0.977 - - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
18. fermt2 ENSDARG00000020242 9351 1.73 - - - 0.968 - - - - 0.762 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
19. rps25 ENSDARG00000041811 52182 1.727 0.840 - - - - 0.887 - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
20. rps29 ENSDARG00000041232 71334 1.718 0.828 - - 0.890 - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
21. slmo2 slmo2 5559 1.717 - - - 0.960 - 0.757 - - -
22. cct4 ENSDARG00000013475 23959 1.702 0.816 - - - - - 0.886 - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
23. RPS17L RPS17L 51105 1.699 0.844 - - - - 0.855 - - -
24. mcm2 ENSDARG00000102798 8148 1.692 - 0.831 - 0.861 - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
25. sf3a1 ENSDARG00000041887 6702 1.688 - 0.879 - - 0.809 - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
26. ola1 ENSDARG00000044565 22424 1.687 0.831 - - - - 0.856 - - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
27. tceb1b 14935 1.669 0.802 - - 0.867 - - - - - transcription elongation factor B (SIII), polypeptide 1b
28. atp5d 20825 1.666 - - - - - 0.845 0.821 - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
29. eif3ba ENSDARG00000059654 22960 1.666 - - - - - 0.810 0.856 - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
30. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.663 0.785 - - - - 0.878 - - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
31. srsf5a ENSDARG00000029818 15600 1.662 - 0.836 - - - 0.826 - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
32. CWC15 ENSDARG00000013382 8969 1.652 - - - - 0.863 - 0.789 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
33. sf3a2 ENSDARG00000021107 2929 1.649 - 0.819 - - 0.830 - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
34. eif3s10 ENSDARG00000076815 10822 1.643 0.824 - - - - - 0.819 - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
35. ndufs3 ENSDARG00000015385 7790 1.641 0.763 - - - - 0.878 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
36. col5a2a ENSDARG00000031678 7743 1.64 - - - - - 0.742 0.898 - - collagen, type V, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030616-13]
37. klc2 3058 1.635 - 0.819 - - 0.816 - - - - kinesin light chain 2
38. dlst ENSDARG00000014230, ENSDARG00000113407 6282 1.626 0.729 - - - - - 0.897 - - dihydrolipoamide S-succinyltransferase [Source:ZFIN;Acc:ZDB-GENE-030326-1]
39. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.616 - 0.836 - - - 0.780 - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
40. aimp1 ENSDARG00000060036 5343 1.615 0.750 - - - - 0.865 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
41. rps17 ENSDARG00000104011 27028 1.611 - - - - 0.758 - 0.853 - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
42. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 1.606 0.710 - - - - 0.896 - - - ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
43. tmem161a ENSDARG00000012790 16094 1.603 0.738 - - - - - 0.865 - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
44. slc25a33 ENSDARG00000039931 2794 1.6 - 0.816 - - - 0.784 - - - solute carrier family 25 (pyrimidine nucleotide carrier), member 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2183]
45. rab10 ENSDARG00000046106 15618 1.596 - - - - - - 0.881 - 0.715 RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
46. calm1b ENSDARG00000034187 13158 1.593 0.728 0.865 - - - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
47. selt2 12741 1.59 0.775 - - - 0.815 - - - - selenoprotein T, 2
48. rpl35 ENSDARG00000018334 69583 1.585 0.749 - - - - 0.836 - - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
49. sumo2b ENSDARG00000102741 18514 1.583 - - - - 0.785 - 0.798 - - small ubiquitin-like modifier 2b [Source:ZFIN;Acc:ZDB-GENE-040801-7]
50. CORO1C CORO1C 5554 1.583 - - - - 0.827 - 0.756 - -
51. ube2v2 ENSDARG00000028198 23341 1.582 0.705 - - - - 0.877 - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
52. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 1.576 0.799 - - - - - - - 0.777 ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
53. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.573 0.730 - - - - 0.843 - - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
54. smyd1b ENSDARG00000091253 4964 1.573 0.723 - - - - - 0.850 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
55. nhp2l1b nhp2l1b 3898 1.572 0.706 - - - 0.866 - - - -
56. atpif1a 6030 1.568 - - - - 0.840 0.728 - - - ATPase inhibitory factor 1a
57. rps27.1 ENSDARG00000023298 86382 1.568 0.806 - 0.762 - - - - - - ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
58. ndufb9 ENSDARG00000041314, ENSDARG00000112557 15434 1.568 0.746 - - - - 0.822 - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:ZFIN;Acc:ZDB-GENE-030131-8364]
59. AIMP1 ENSDARG00000060036 4136 1.565 0.703 - - - - - 0.862 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
60. rpl23a ENSDARG00000006316 59831 1.562 0.726 - - - - - 0.836 - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
61. tuba8l3 ENSDARG00000070155 7525 1.56 - 0.841 0.719 - - - - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
62. skp1 ENSDARG00000003151 8172 1.558 - - - - - 0.706 0.852 - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
63. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.555 0.740 - - - - 0.815 - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
64. BX324201.1 BX324201.1 3302 1.553 0.720 0.833 - - - - - - -
65. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.553 0.813 - - - - 0.740 - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
66. tsc2 ENSDARG00000103125 1403 1.546 - - - - 0.804 0.742 - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
67. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.543 - - - - - 0.742 0.801 - -
68. sdhdb ENSDARG00000030139 9761 1.542 0.703 - - - - 0.839 - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
69. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.539 0.742 - - - - - 0.797 - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
70. nrf1 ENSDARG00000000018 4683 1.539 - - - - 0.813 - 0.726 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
71. cyc1 ENSDARG00000038075 16699 1.537 0.739 - - - - 0.798 - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
72. si:ch73-18b11.1 si:ch73-18b11.1 3840 1.53 - - - - 0.824 - 0.706 - -
73. gapdhs ENSDARG00000039914 8760 1.526 - - - - - - 0.757 - 0.769 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
74. eif3ha ENSDARG00000102452 9238 1.525 0.750 - - - - 0.775 - - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
75. banf1 ENSDARG00000037009 16466 1.523 - - - - - 0.778 0.745 - - barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
76. lrp1b lrp1b 3216 1.516 - - - - 0.815 - 0.701 - -
77. camk2g1 ENSDARG00000071395 10456 1.515 - - - - - - 0.779 - 0.736 calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1 [Source:ZFIN;Acc:ZDB-GENE-050913-146]
78. txlnbb ENSDARG00000076241 6396 1.513 0.769 - - - - 0.744 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
79. sucla2 ENSDARG00000005359 5992 1.512 0.741 - - - - 0.771 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
80. zgc:193541 ENSDARG00000092873 21276 1.508 0.722 - - - - 0.786 - - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
81. ppiaa ENSDARG00000009212 290634 1.502 0.772 - - - - 0.730 - - - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
82. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.491 0.721 - - - - 0.770 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
83. hfe2 4113 1.49 - - - - - 0.758 0.732 - - hemochromatosis type 2
84. psmd14 ENSDARG00000063100 15711 1.488 - - - - - 0.751 - - 0.737 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
85. stx4 ENSDARG00000052518 1848 1.486 - - - - - 0.748 0.738 - - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
86. rpl22l1 ENSDARG00000010244 36262 1.483 - - - - 0.743 0.740 - - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
87. eif3jb ENSDARG00000053370 1776 1.48 0.753 - - - - 0.727 - - - eukaryotic translation initiation factor 3, subunit Jb [Source:ZFIN;Acc:ZDB-GENE-040426-2900]
88. zgc:77086 ENSDARG00000014015 4908 1.48 - - - - - 0.717 0.763 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
89. mdh1b ENSDARG00000018008 3196 1.479 0.769 - - - - 0.710 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
90. mrpl22 ENSDARG00000109961 1374 1.471 0.759 - - - - 0.712 - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
91. nhp2 ENSDARG00000069422 9925 1.469 0.756 - - - - 0.713 - - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
92. hnrnph1l ENSDARG00000005551 8727 1.465 - - 0.757 - 0.708 - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
93. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.461 0.725 - - - - 0.736 - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
94. atf4b1 atf4b1 17316 1.457 - - - - - 0.724 - - 0.733
95. cnbpb ENSDARG00000070922 14606 1.457 0.723 - - - - 0.734 - - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
96. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.456 0.743 - - - - 0.713 - - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
97. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.454 0.735 - - - - 0.719 - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
98. mrpl36 ENSDARG00000070607 4069 1.447 0.724 - - - - 0.723 - - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
99. pkn1 pkn1 1510 1.436 - - - - - 0.726 0.710 - -
100. PTGES3L PTGES3L 4801 1.424 0.703 - - - - 0.721 - - -

There are 819 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA