Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpl12

Gene Name Gene ID Reads Annotation
rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]










Genes with expression patterns similar to rpl12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
2. RPS17L RPS17L 51105 3.163 0.749 0.853 - - - 0.838 - - 0.723
3. cox6b2 ENSDARG00000037860 33134 2.382 - - 0.775 - - 0.857 0.750 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
4. cnbpb ENSDARG00000070922 14606 2.377 - 0.722 - - - 0.831 0.824 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
5. ube2d3 ENSDARG00000038473 4096 2.371 - 0.759 - - - - 0.830 - 0.782 ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
6. rps25 ENSDARG00000041811 52182 2.336 0.777 - - - - 0.811 0.748 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
7. aars ENSDARG00000069142, ENSDARG00000113882 10348 2.333 - 0.703 - - - 0.797 0.833 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
8. dub ENSDARG00000059774 1026 2.278 - 0.783 - - - 0.754 0.741 - - duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]
9. eif2s2 ENSDARG00000053047 15904 2.276 - 0.702 - - - 0.721 0.853 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
10. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 2.267 0.738 - - - - 0.731 0.798 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
11. CHCHD3 CHCHD3 1425 2.245 - 0.782 - - - 0.700 0.763 - -
12. mdh1b ENSDARG00000018008 3196 2.2 0.715 - - - - 0.723 0.762 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
13. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 2.191 0.716 - - - - 0.720 0.755 - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
14. eif3g ENSDARG00000016889 10367 1.708 - - - - - - 0.836 - 0.872 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
15. eif2s1b ENSDARG00000052178 11961 1.65 - - - - - 0.823 0.827 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
16. ola1 ENSDARG00000044565 22424 1.642 0.852 - - - - 0.790 - - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
17. atp5o 10343 1.634 - - - - - 0.832 0.802 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
18. mcts1 ENSDARG00000025972 4662 1.625 0.766 - - - - - 0.859 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
19. ndufb3 ENSDARG00000075709 6609 1.614 - - - - - 0.750 0.864 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
20. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.613 - - - - - 0.745 0.868 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
21. eef1db ENSDARG00000030053 5185 1.61 - - - - - 0.784 0.826 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
22. ube2v2 ENSDARG00000028198 23341 1.609 - - - - - 0.890 0.719 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
23. cct8 ENSDARG00000008243 6843 1.609 - - - - - 0.809 0.800 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
24. rpl13 ENSDARG00000099380 20663 1.606 0.710 - - - - 0.896 - - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
25. sox6 ENSDARG00000015536 7728 1.605 - - - - - 0.791 0.814 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
26. vapal ENSDARG00000115862 3108 1.602 - - - - - 0.708 0.894 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
27. cox7c ENSDARG00000104537 12169 1.599 - 0.750 - - - - 0.849 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
28. mbnl2 ENSDARG00000018460 3328 1.585 - 0.777 - - - - - - 0.808 muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
29. riok3 ENSDARG00000042751 3163 1.583 - 0.773 - - - - 0.810 - - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
30. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.581 - - - - - - 0.739 - 0.842 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
31. fmr1 ENSDARG00000037433 5132 1.579 - - - - - - 0.773 - 0.806 fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
32. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 1.578 - - - - - 0.783 0.795 - - ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
33. zgc:92518 ENSDARG00000016343 3837 1.576 - 0.811 - - - - 0.765 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
34. ndufa10 ENSDARG00000013333 6597 1.574 - - - - - 0.862 - - 0.712 NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
35. si:ch211-242b18.1 ENSDARG00000054723 2929 1.573 - - - - - 0.762 0.811 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
36. gstm gstm 4064 1.564 - - - - - - 0.796 - 0.768
37. me3 ENSDARG00000002305 3305 1.56 - 0.776 - - - - 0.784 - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
38. cox6c ENSDARG00000038577 16845 1.559 - - - - - 0.735 0.824 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
39. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.555 0.774 - - - - - 0.781 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
40. psmd13 ENSDARG00000016239 4229 1.555 - 0.765 - - - - 0.790 - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
41. foxo3b ENSDARG00000042904 5046 1.547 - - - - - 0.774 0.773 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
42. rab5if ENSDARG00000074790 8807 1.546 - - - - - 0.729 0.817 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
43. pfdn4 ENSDARG00000061228 8266 1.545 - - - - - 0.809 0.736 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
44. eif3ha ENSDARG00000102452 9238 1.543 0.748 - - - - - 0.795 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
45. mrpl14 ENSDARG00000068886 1991 1.542 - - - - - - 0.762 - 0.780 mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
46. kras ENSDARG00000010844 2885 1.541 - - - - - - 0.737 - 0.804 v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
47. six1b ENSDARG00000026473 1908 1.54 - - - - - 0.821 0.719 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
48. oaz1a ENSDARG00000071403 21112 1.538 - - 0.770 - - - - - 0.768 ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
49. fermt2 ENSDARG00000020242 9351 1.537 - - - - - 0.714 0.823 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
50. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.535 0.770 - - - - - 0.765 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
51. cct3 ENSDARG00000016173 15869 1.532 0.745 - - - - - 0.787 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
52. sh3bgr ENSDARG00000021633 3498 1.529 - - - - - 0.795 0.734 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
53. atp1b3b ENSDARG00000042837 5163 1.528 - 0.777 - - - - 0.751 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
54. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.525 - - - - - 0.707 0.818 - - eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
55. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.525 0.800 - - - - 0.725 - - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
56. atp5j 4272 1.524 - - 0.706 - - - 0.818 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
57. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.523 - 0.762 - - - 0.761 - - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
58. nexn ENSDARG00000057317 10972 1.52 - 0.777 - - - - 0.743 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
59. lap3 ENSDARG00000061981 1188 1.518 - - - - - - 0.753 - 0.765 leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
60. NDUFA3 ENSDARG00000041400 7939 1.516 - - 0.758 - - 0.758 - - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
61. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 1.515 - - - - - - 0.789 - 0.726 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
62. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.513 - - - - - 0.720 0.793 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
63. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.509 - - - - - - 0.740 - 0.769 limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
64. psmb4 ENSDARG00000054696 8100 1.506 - 0.769 - - - - 0.737 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
65. pdcd4a ENSDARG00000021702 7293 1.506 - - - - - 0.722 0.784 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
66. aimp1 ENSDARG00000060036 5343 1.503 - - - - - 0.746 0.757 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
67. txlnbb ENSDARG00000076241 6396 1.501 - - - - - 0.756 0.745 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
68. rer1 ENSDARG00000012747 6939 1.5 - 0.748 0.752 - - - - - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
69. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.496 - - 0.750 - - - 0.746 - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
70. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.494 - - 0.749 - - 0.745 - - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
71. myoz2a ENSDARG00000012311 1373 1.489 - - - - - 0.789 0.700 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
72. agla ENSDARG00000103811 2856 1.487 - - - - - 0.760 0.727 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
73. usp2a ENSDARG00000020107 2586 1.484 - - - - - 0.733 0.751 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
74. hsp90aa1.1 ENSDARG00000010478 47784 1.483 - - - - - 0.741 0.742 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
75. trim55a ENSDARG00000029596 2858 1.481 - - - - - 0.720 0.761 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
76. cct6a ENSDARG00000021252 33641 1.48 - 0.730 - - - 0.750 - - - chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
77. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.477 - - - - - 0.710 0.767 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
78. CR847973.1 ENSDARG00000115516 8754 1.476 0.763 - - - - - 0.713 - -
79. THOP1 ENSDARG00000013776 2717 1.473 0.755 - - - - 0.718 - - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
80. tead3a ENSDARG00000074321 2240 1.471 - - - - - 0.721 0.750 - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
81. eif4ebp2 ENSDARG00000031819 13168 1.471 - - - - - 0.706 - - 0.765 eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
82. srl ENSDARG00000104587 11126 1.469 0.722 - - - - - 0.747 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
83. ndufb11 ENSDARG00000043467 7495 1.469 - - - - - 0.701 0.768 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
84. zgc:158296 ENSDARG00000070923 3935 1.461 - - - - - 0.731 0.730 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
85. MUSTN1 MUSTN1 1882 1.459 - - - - - 0.757 0.702 - -
86. trdn ENSDARG00000041779 4283 1.457 - - - - - 0.733 0.724 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
87. smtnl1 ENSDARG00000041257 7410 1.457 - 0.742 - - - - 0.715 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
88. mrps34 ENSDARG00000057910 2007 1.457 - - - - - 0.756 0.701 - - mitochondrial ribosomal protein S34 [Source:ZFIN;Acc:ZDB-GENE-041114-71]
89. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 1.451 - - - - - 0.721 - - 0.730 NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
90. entpd5b ENSDARG00000093659 450 1.448 - - - - - 0.731 0.717 - - ectonucleoside triphosphate diphosphohydrolase 5b [Source:ZFIN;Acc:ZDB-GENE-091118-88]
91. smarcd3a ENSDARG00000038786 2894 1.447 - - - - - 0.740 0.707 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
92. ache ENSDARG00000031796 1985 1.443 0.734 - - - - - 0.709 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
93. TRIM63 TRIM63 1600 1.442 - - - - - 0.701 0.741 - -
94. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 1.441 0.733 - - - - 0.708 - - - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
95. cct7 ENSDARG00000007385 1513 1.439 - - - - - 0.734 0.705 - - chaperonin containing TCP1, subunit 7 (eta) [Source:ZFIN;Acc:ZDB-GENE-020419-7]
96. mrps33 ENSDARG00000020015 3551 1.437 0.720 - - - - - 0.717 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
97. tma7 ENSDARG00000071670 13372 1.436 - - - - 0.730 - 0.706 - - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
98. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.433 - - - - 0.719 - 0.714 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
99. eif4e2 ENSDARG00000038585 2116 1.433 - - - - - 0.724 0.709 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
100. taf10 ENSDARG00000068641 3333 1.422 - - 0.719 - - - 0.703 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]

There are 917 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA