Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpgra

Gene Name Gene ID Reads Annotation
rpgra ENSDARG00000056617 77 retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]










Genes with expression patterns similar to rpgra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpgra ENSDARG00000056617 77 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
2. si:dkey-157e10.7 si:dkey-157e10.7 105 1.919 - 0.928 - - - - - 0.991 -
3. fgf12a ENSDARG00000027957 143 1.82 - 0.844 - - - - - 0.976 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
4. si:dkey-253d23.2 ENSDARG00000071589 143 1.78 0.804 - - - - - - 0.976 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
5. spef2 ENSDARG00000098330 59 1.751 - - - - - - 0.758 0.993 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
6. si:ch73-91k6.1 18 1.748 0.904 0.844 - - - - - - - si:ch73-91k6.1
7. si:dkey-23a23.3 ENSDARG00000088214 86 1.747 0.924 0.823 - - - - - - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
8. ZDHHC1 ENSDARG00000077546 14 1.719 0.894 - - - - 0.825 - - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
9. si:dkey-151m22.8 ENSDARG00000095934 41 1.715 0.942 0.773 - - - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
10. GDPD4_1 GDPD4_1 190 1.7 - - - 0.707 - - - 0.993 -
11. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 1.697 - - - - - 0.717 - 0.980 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
12. pcsk5a ENSDARG00000067537 44 1.662 0.904 - 0.758 - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
13. eif4enif1 ENSDARG00000016177 238 1.659 0.750 0.909 - - - - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
14. si:dkey-32e6.3 ENSDARG00000092934 133 1.655 0.774 0.881 - - - - - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
15. si:dkey-3d18.4 si:dkey-3d18.4 43 1.653 0.928 - - - 0.725 - - - -
16. kcnt1 ENSDARG00000079484 45 1.65 - 0.844 - - - 0.806 - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
17. wbscr27 wbscr27 70 1.633 - 0.764 - 0.869 - - - - -
18. GABRG3 84 1.623 0.821 0.802 - - - - - - - gamma-aminobutyric acid type A receptor gamma3 subunit
19. mif4gda ENSDARG00000102080, ENSDARG00000115033, ENSDARG00000117121 198 1.617 0.853 0.764 - - - - - - - MIF4G domain containing a [Source:ZFIN;Acc:ZDB-GENE-040426-1382]
20. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.617 - 0.844 - - - 0.773 - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
21. cacna1aa ENSDARG00000037905 4 1.602 - 0.844 0.758 - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
22. MSANTD2 ENSDARG00000079474 121 1.593 - - - 0.826 - 0.767 - - - Myb/SANT DNA binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26266]
23. NF1 NF1 62 1.582 0.839 0.743 - - - - - - -
24. chmp5a ENSDARG00000038855 129 1.575 - - - 0.836 - 0.739 - - - charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]
25. SUSD3 SUSD3 64 1.573 - 0.728 - 0.845 - - - - -
26. zgc:171422 ENSDARG00000104715 255 1.567 - 0.789 - - - - 0.778 - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
27. PCSK6 ENSDARG00000104574 710 1.56 0.761 - - - - - - 0.799 - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
28. si:ch211-51o18.2 si:ch211-51o18.2 111 1.56 0.850 - - 0.710 - - - - -
29. KDM4A KDM4A 372 1.558 0.778 - - - - - 0.780 - -
30. TP53BP2 TP53BP2 217 1.537 0.836 - - - - - 0.701 - -
31. clock clock 32 1.526 - 0.791 0.735 - - - - - -
32. nsmfa ENSDARG00000060025 70 1.526 0.809 0.717 - - - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
33. zte25 zte25 29 1.514 - 0.761 - 0.753 - - - - -
34. BICC1 BICC1 264 1.511 - 0.708 - 0.803 - - - - -
35. ucp3 ENSDARG00000091209 137 1.494 - 0.786 0.708 - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
36. CU104697.1 CU104697.1 19 1.486 - - 0.753 - - - 0.733 - -
37. syn2a ENSDARG00000045945 434 1.477 - 0.703 - - - - - 0.774 - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
38. srfa ENSDARG00000053918 1773 1.468 0.741 - - - - - - 0.727 - serum response factor a [Source:ZFIN;Acc:ZDB-GENE-990714-29]
39. snapc4 ENSDARG00000067673 81 1.468 - 0.758 - - - - 0.710 - - small nuclear RNA activating complex, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5794]
40. si:ch211-136a13.1 ENSDARG00000060927 250 1.441 - 0.702 - - - - 0.739 - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
41. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 1.433 - 0.704 - - - 0.729 - - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
42. GP9 ENSDARG00000090638 53 1.423 - 0.706 - - - 0.717 - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
43. si:ch73-167f18.3 si:ch73-167f18.3 78 0.995 - - - - - - - 0.995 -
44. jam3a ENSDARG00000114589 630 0.995 - - - - - - - 0.995 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
45. mir130b 180 0.995 - - - - - - - 0.995 - microRNA 130b
46. ankdd1b ENSDARG00000025866 51 0.995 - - - - - - - 0.995 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
47. MAP7 MAP7 98 0.995 - - - - - - - 0.995 -
48. si:dkey-100h21.2 si:dkey-100h21.2 30 0.995 - - - - - - - 0.995 -
49. IKZF4 ENSDARG00000037068 36 0.995 - - - - - - - 0.995 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
50. pde6b ENSDARG00000011671 44 0.995 - - - - - - - 0.995 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
51. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.995 - - - - - - - 0.995 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
52. adcyap1a ENSDARG00000004015 67 0.994 - - - - - - - 0.994 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
53. sgta ENSDARG00000019941 238 0.993 - 0.993 - - - - - - - small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
54. hoxa4a 37 0.993 - - - - - - - 0.993 - homeobox A4a, transcript variant X4
55. VDAC3 ENSDARG00000003695 34 0.993 - - - - - - - 0.993 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
56. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.993 - - - - - - - 0.993 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
57. pus7 ENSDARG00000031774 195 0.992 - - - - - - - 0.992 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
58. zgc:174688 zgc:174688 170 0.991 - - - - - - - 0.991 -
59. mea1 ENSDARG00000039820 589 0.99 - - - - - - - 0.990 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
60. TTF1_4 TTF1_4 504 0.99 - - - - - - - 0.990 -
61. ly75 ENSDARG00000053113 196 0.989 - - - - - - - 0.989 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
62. si:dkey-17e6.2 si:dkey-17e6.2 72 0.989 - - - - - - - 0.989 -
63. KBTBD13_1 KBTBD13_1 116 0.988 - - - - - - - 0.988 -
64. prkag3b ENSDARG00000000369 1945 0.988 - - - - - - - 0.988 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
65. nrxn2b ENSDARG00000063150 343 0.987 - - - - - - - 0.987 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
66. BX005410.2 BX005410.2 44 0.987 - - - - - - - 0.987 -
67. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.986 - - - - - - - 0.986 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
68. b3galtla b3galtla 111 0.986 - - - - - - - 0.986 -
69. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.986 - - - - - - - 0.986 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
70. SHANK1 ENSDARG00000060539 102 0.985 - - - - - - - 0.985 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
71. hn1a hn1a 115 0.985 - - - - - - - 0.985 -
72. tarsl2 ENSDARG00000092774 505 0.984 - - - - - - - 0.984 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
73. rwdd2b ENSDARG00000055426 294 0.984 - - - - - - - 0.984 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
74. pard3 pard3 161 0.983 - - - - - - - 0.983 -
75. CIT CIT 212 0.983 - - - - - - - 0.983 -
76. CABZ01045230.1 CABZ01045230.1 158 0.983 - - - - - - - 0.983 -
77. zgc:174877 ENSDARG00000079278 143 0.983 - - - - - - - 0.983 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
78. slc6a6a ENSDARG00000012534 183 0.982 - - - - - - - 0.982 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
79. aatkb ENSDARG00000104442 392 0.982 - - - - - - - 0.982 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
80. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.982 - - - - - - - 0.982 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
81. BX511021.1 ENSDARG00000073936 647 0.981 - - - - - - - 0.981 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
82. zgc:154075 ENSDARG00000067630 284 0.981 0.981 - - - - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
83. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.979 - - - - - - - 0.979 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
84. commd1 ENSDARG00000031203 340 0.979 - - - - - - - 0.979 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
85. enosf1 ENSDARG00000038359 209 0.979 - - - - - - - 0.979 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
86. ncoa6 ENSDARG00000071272 759 0.977 - - - - - - - 0.977 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
87. nrp2b ENSDARG00000038446 783 0.977 - - - - - - - 0.977 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
88. si:dkey-8k3.2 ENSDARG00000038424 285 0.977 - - - - - - - 0.977 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
89. p2rx3b ENSDARG00000029718 105 0.976 - - - - - - - 0.976 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
90. camk2d1 ENSDARG00000043010 669 0.976 - - - - - - - 0.976 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
91. smarcd2 ENSDARG00000088877 416 0.975 - - - - - - - 0.975 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
92. dclk1a ENSDARG00000018856 177 0.974 - - - - - - - 0.974 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
93. ANGPT4 ENSDARG00000076787 140 0.972 - - - - - - - 0.972 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
94. reep1 ENSDARG00000014854 915 0.971 - - - - - - - 0.971 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
95. usp4 ENSDARG00000014770 1684 0.971 - - - - - - - 0.971 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
96. ALPK1 195 0.971 - - - - - - - 0.971 - alpha-kinase 1
97. CR381544.1 ENSDARG00000088187 821 0.971 - - - - - - - 0.971 -
98. zgc:122979 ENSDARG00000004187 61 0.97 - - - - - - - 0.970 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
99. pdxka ENSDARG00000088959 217 0.97 - - - - - - - 0.970 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
100. adora1 adora1 149 0.969 - - - - - - - 0.969 -

There are 1319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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