Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpf2

Gene Name Gene ID Reads Annotation
rpf2 ENSDARG00000043960 2719 ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]










Genes with expression patterns similar to rpf2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpf2 ENSDARG00000043960 2719 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
2. gstm gstm 4064 3.069 0.711 0.736 0.867 - - - 0.755 - -
3. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 2.557 - 0.778 0.966 0.813 - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
4. wu:fb17g07 wu:fb17g07 10567 2.446 - 0.764 0.943 - - - 0.739 - -
5. tjp1a ENSDARG00000077506 2658 2.445 - 0.714 0.957 - - - 0.774 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
6. hsd17b10 ENSDARG00000017781 1793 2.331 0.701 0.836 - - - - 0.794 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
7. apex1 ENSDARG00000045843 6345 2.329 0.742 0.863 - - - - 0.724 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
8. lrrfip1a ENSDARG00000030012 1263 2.253 0.701 0.829 - - - 0.723 - - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
9. clybl ENSDARG00000029729 690 1.794 - - 0.964 - - - - 0.830 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
10. pnn ENSDARG00000015851 1269 1.788 - - 0.963 - - - - 0.825 - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
11. arid2 ENSDARG00000007413 4413 1.777 - 0.835 0.942 - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
12. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.771 - 0.822 0.949 - - - - - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
13. kif5bb 1645 1.771 - - 0.884 - - - - 0.887 - kinesin family member 5B, b
14. lpl ENSDARG00000087697 2578 1.765 - 0.813 0.952 - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
15. CT573103.1 ENSDARG00000097550 950 1.763 - - 0.953 - - - - 0.810 -
16. rela ENSDARG00000098696 889 1.76 - - 0.943 0.817 - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
17. dyrk2 ENSDARG00000094646 2163 1.746 - 0.875 - - - - - 0.871 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
18. arid1b ENSDARG00000092503 1376 1.74 - - 0.964 - - - 0.776 - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
19. rnf113a ENSDARG00000037930 849 1.736 - - 0.959 0.777 - - - - - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
20. cmip ENSDARG00000062933 4521 1.715 - 0.767 0.948 - - - - - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
21. smg5 ENSDARG00000041481 1286 1.715 - - 0.968 - - - 0.747 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
22. pabpn1 ENSDARG00000045373 4876 1.709 - - 0.862 - - - 0.847 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
23. ppp6r3 ENSDARG00000013379 2912 1.701 - 0.762 0.939 - - - - - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
24. pdzrn3b ENSDARG00000073869 1566 1.697 0.740 - 0.957 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
25. phc2b_1 ENSDARG00000013224 1316 1.688 - 0.723 0.965 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
26. xrcc5_1 ENSDARG00000099298 1533 1.686 - - 0.955 - - - 0.731 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
27. impdh1b ENSDARG00000029524 7472 1.682 - 0.743 0.939 - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
28. DNAJC16 ENSDARG00000059699 507 1.68 - 0.721 0.959 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
29. ngdn ENSDARG00000045372 782 1.675 - 0.809 - - - - 0.866 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
30. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.675 - - 0.946 - - - - 0.729 - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
31. si:ch211-238e22.1 si:ch211-238e22.1 1032 1.672 - - 0.952 - - - 0.720 - -
32. nrg1 ENSDARG00000104314 1081 1.672 - - 0.960 0.712 - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
33. BX511021.1 ENSDARG00000073936 647 1.669 - 0.829 - - - - - 0.840 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
34. CABZ01072954.1 CABZ01072954.1 2330 1.658 - - 0.946 - - - 0.712 - -
35. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.655 - 0.722 0.933 - - - - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
36. ddb1 ENSDARG00000074431 1054 1.651 - 0.752 - - - - - 0.899 - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
37. minos1 ENSDARG00000101619 5273 1.632 - 0.770 0.862 - - - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
38. tmem161b ENSDARG00000055989 680 1.63 - - - - - - 0.819 0.811 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
39. tufm ENSDARG00000104173 9292 1.626 - - 0.856 - - - 0.770 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
40. cct5 ENSDARG00000045399 11572 1.625 0.765 0.860 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
41. qars ENSDARG00000010316 2715 1.622 - 0.914 - - - - 0.708 - - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
42. txn2 ENSDARG00000034777 4071 1.618 0.763 0.855 - - - - - - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
43. mrpl44 ENSDARG00000094277 1778 1.617 - 0.863 - - - - 0.754 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
44. eif2s3 ENSDARG00000008292 17051 1.608 0.724 0.884 - - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
45. prkag3b ENSDARG00000000369 1945 1.605 - - - 0.764 - - - 0.841 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
46. pno1 ENSDARG00000008502 4547 1.604 - 0.864 - - - - - 0.740 - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
47. pbxip1a ENSDARG00000071015 4960 1.603 0.733 0.870 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
48. cbx3a ENSDARG00000003860 4922 1.601 - 0.757 0.844 - - - - - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
49. homer3 homer3 1974 1.598 - 0.806 - - - - 0.792 - -
50. txlnbb ENSDARG00000076241 6396 1.597 0.731 0.866 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
51. C20H1orf112 C20H1orf112 316 1.597 - - - 0.773 - - - 0.824 -
52. BX323051.1 ENSDARG00000099065 1758 1.592 - 0.763 - - - - 0.829 - -
53. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.591 0.743 0.848 - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
54. srpk3 ENSDARG00000005916 1546 1.588 0.740 0.848 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
55. ddx49 ENSDARG00000012899 1604 1.588 - 0.886 - - - - 0.702 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
56. smarcd2 ENSDARG00000088877 416 1.588 - - - - - - 0.749 0.839 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
57. MRPL21 ENSDARG00000003846 3244 1.586 - 0.781 - - - - 0.805 - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
58. slc25a23a ENSDARG00000005690 824 1.584 - 0.811 - - - - - 0.773 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
59. atf7ip ENSDARG00000069619 5495 1.584 - 0.877 - - - - 0.707 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
60. ly75 ENSDARG00000053113 196 1.583 - 0.738 - - - - - 0.845 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
61. farsa ENSDARG00000098825 2813 1.582 - 0.843 - - - - 0.739 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
62. eif4h ENSDARG00000042252 6742 1.582 - 0.829 - - - - 0.753 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
63. nudt3a ENSDARG00000016256 2713 1.582 - 0.874 - - - - 0.708 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
64. usp28 ENSDARG00000008880 1850 1.581 0.756 0.825 - - - - - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
65. PRC1 PRC1 583 1.579 - - - - - 0.737 0.842 - -
66. gcshb ENSDARG00000105187 182 1.578 - - - 0.821 - 0.757 - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
67. pomp ENSDARG00000032296 4439 1.576 - 0.830 - - - - 0.746 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
68. ssb ENSDARG00000029252 3394 1.57 - 0.853 - - - 0.717 - - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
69. mrpl46 ENSDARG00000016307 613 1.57 - 0.849 - - - 0.721 - - - mitochondrial ribosomal protein L46 [Source:ZFIN;Acc:ZDB-GENE-040718-224]
70. nrp2b ENSDARG00000038446 783 1.568 - - - 0.719 - - - 0.849 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
71. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.567 - 0.779 - - - - 0.788 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
72. mrpl9 ENSDARG00000063249 783 1.562 - 0.848 - - - - 0.714 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
73. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 1.56 - 0.740 - - - - 0.820 - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
74. pus7 ENSDARG00000031774 195 1.56 - - - - - - 0.712 0.848 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
75. spry2 ENSDARG00000078308 1200 1.559 - 0.808 - 0.751 - - - - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
76. bysl ENSDARG00000001057 2621 1.559 - 0.756 - - - - 0.803 - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
77. smyd1b ENSDARG00000091253 4964 1.559 0.764 0.795 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
78. smtnl1 ENSDARG00000041257 7410 1.558 - - 0.853 - - - - 0.705 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
79. celf1 ENSDARG00000005315 5598 1.553 - 0.830 - - - - 0.723 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
80. foxc1b ENSDARG00000055398 1499 1.552 - 0.827 - - - 0.725 - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
81. actn3b ENSDARG00000001431 15747 1.552 0.746 0.806 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
82. mtdhb ENSDARG00000004939 1225 1.552 0.727 0.825 - - - - - - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
83. reep3l reep3l 608 1.551 - - - - - - 0.735 0.816 -
84. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.55 - 0.743 - - - - 0.807 - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
85. reep1 ENSDARG00000014854 915 1.55 - 0.725 - - - - - 0.825 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
86. fam203a fam203a 570 1.549 - 0.768 - 0.781 - - - - -
87. uqcrc2a ENSDARG00000014794 3949 1.547 - 0.756 - - - - 0.791 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
88. ndufaf4 ENSDARG00000077859 552 1.546 - 0.719 - - - - - 0.827 - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
89. C13H10orf71 3489 1.546 0.709 0.837 - - - - - - - chromosome 13 C10orf71 homolog
90. rab5if ENSDARG00000074790 8807 1.545 - 0.840 0.705 - - - - - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
91. erbb2ip 403 1.544 - - - 0.766 - - 0.778 - - erbb2 interacting protein, transcript variant X3
92. dtna ENSDARG00000031015 1746 1.543 0.779 0.764 - - - - - - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
93. mesdc2 776 1.542 - 0.719 - 0.823 - - - - - mesoderm development candidate 2, transcript variant X2
94. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.54 - 0.753 - - - - 0.787 - - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
95. sf3b5 ENSDARG00000016855 4015 1.538 - 0.824 - - - - 0.714 - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
96. si:ch211-85n16.3 ENSDARG00000096346 1095 1.537 - - - 0.714 - - 0.823 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
97. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.536 - 0.786 - - - - 0.750 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
98. cdkn2aipnl ENSDARG00000053395 5107 1.535 0.705 0.830 - - - - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
99. git2a ENSDARG00000061915 884 1.533 - 0.710 - - - - - 0.823 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
100. hapln1a ENSDARG00000089769 12334 1.533 0.719 0.814 - - - - - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]

There are 1896 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA