Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpap3

Gene Name Gene ID Reads Annotation
rpap3 ENSDARG00000087962 22 RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]










Genes with expression patterns similar to rpap3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpap3 ENSDARG00000087962 22 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
2. GPR137B_1 GPR137B_1 8 2.38 - - - 0.714 - 0.962 - 0.704 -
3. si:dkey-40j3.1 si:dkey-40j3.1 1 2 - 1.000 - - - 1.000 - - -
4. CABZ01078124.1 CABZ01078124.1 4 1.881 - 1.000 - 0.881 - - - - -
5. cdc14aa ENSDARG00000013858 18 1.876 - 0.876 - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
6. si:ch211-105d18.8 si:ch211-105d18.8 38 1.866 - - 0.866 1.000 - - - - -
7. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.841 - - - 1.000 - 0.841 - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
8. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 1.828 - 1.000 0.828 - - - - - -
9. im:7151068 im:7151068 2 1.778 - - - 1.000 0.778 - - - -
10. si:ch211-57m13.1 ENSDARG00000095927 1 1.778 - - - 1.000 0.778 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
11. olig1 ENSDARG00000040948 1 1.778 - - - 1.000 0.778 - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
12. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1.773 - - - 0.773 - 1.000 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
13. LRTM1 ENSDARG00000098742 21 1.771 - 0.903 0.868 - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
14. shank3b ENSDARG00000063054 148 1.771 - - 0.806 - - 0.965 - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
15. edil3 edil3 24 1.755 - 1.000 0.755 - - - - - -
16. C7H15orf43 C7H15orf43 10 1.754 - 1.000 - - - 0.754 - - -
17. si:ch211-26b3.4 ENSDARG00000075491 50 1.734 - 1.000 0.734 - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
18. si:dkey-163m14.7 65 1.733 - 1.000 0.733 - - - - - - si:dkey-163m14.7
19. CCDC74B CCDC74B 8 1.731 - - - 0.731 - 1.000 - - -
20. si:dkey-43k4.4 si:dkey-43k4.4 4 1.728 - - - - - 1.000 - - 0.728
21. CABZ01065246.2 CABZ01065246.2 45 1.723 - 0.945 - - 0.778 - - - -
22. vps13d ENSDARG00000017986 183 1.713 - 0.903 0.810 - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
23. NETO2_1 NETO2_1 15 1.709 - 1.000 - - - 0.709 - - -
24. trim54 ENSDARG00000029907 10 1.705 - 1.000 - 0.705 - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
25. ANGEL1 ENSDARG00000077567 38 1.68 - 0.906 0.774 - - - - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
26. polm ENSDARG00000103470 49 1.593 - - 0.864 - - - - - 0.729 polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
27. MLF1IP MLF1IP 15 1.487 - - - - 0.778 - - - 0.709
28. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
29. CU638695.1 CU638695.1 90 1 - - - - - 1.000 - - -
30. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - 1.000 - - - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
31. shisa9 shisa9 35 1 - 1.000 - - - - - - -
32. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 1 - - - 1.000 - - - - - zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
33. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
34. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - 1.000 - - - - - - -
35. tshb tshb 7 1 - - - - - 1.000 - - -
36. DXO ENSDARG00000036852 16 1 - - - - - 1.000 - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
37. dlgap1a ENSDARG00000014280 1 1 - 1.000 - - - - - - - discs, large (Drosophila) homolog-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030616-580]
38. uvssa ENSDARG00000100916 73 1 - - - - - 1.000 - - - UV-stimulated scaffold protein A [Source:ZFIN;Acc:ZDB-GENE-091204-111]
39. pnp6 ENSDARG00000040942, ENSDARG00000114753 10 1 - - - - - 1.000 - - - purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800]
40. KCNH2 KCNH2 1 1 - - - 1.000 - - - - -
41. TMEM132B TMEM132B 2 1 - 1.000 - - - - - - -
42. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1 - 1.000 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
43. BX324215.1 BX324215.1 2 1 - - - - - 1.000 - - -
44. si:zfos-754c12.1 si:zfos-754c12.1 89 1 - 1.000 - - - - - - -
45. kiss1 ENSDARG00000075829 4 1 - - - 1.000 - - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
46. si:ch211-225p5.3 si:ch211-225p5.3 10 1 - - - 1.000 - - - - -
47. SNORD65 SNORD65 35 1 - - - - - 1.000 - - -
48. ZNF135_4 ZNF135_4 3 1 - - - - - 1.000 - - -
49. ZDHHC1 ENSDARG00000077546 14 1 - - - 1.000 - - - - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
50. pus7l_1 ENSDARG00000069780 49 1 - 1.000 - - - - - - - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
51. si:dkey-126g1.6 si:dkey-126g1.6 1 1 - - - - - 1.000 - - -
52. mhc1zaa_1 ENSDARG00000092162 27 1 - 1.000 - - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
53. DTX4_1 ENSDARG00000076302 31 1 - 1.000 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
54. URB1_1 URB1_1 8 1 - 1.000 - - - - - - -
55. mstna ENSDARG00000042947 1 1 - - - - - 1.000 - - - myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
56. gnb3b ENSDARG00000002696 46 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
57. mif4gdb ENSDARG00000102578 31 1 - - - - - 1.000 - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
58. MFRP MFRP 6 1 - - - - - 1.000 - - -
59. zgc:113389 zgc:113389 123 1 - - - - - 1.000 - - -
60. or137-8 ENSDARG00000105705 1 1 - - - 1.000 - - - - - odorant receptor, family H, subfamily 137, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-28]
61. CR354549.1 ENSDARG00000117215 3 1 - 1.000 - - - - - - -
62. st8sia7.1 ENSDARG00000054211 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
63. ms4a17a.6 ENSDARG00000007018 6 1 - - - 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
64. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - 1.000 - - -
65. batf ENSDARG00000011818 2 1 - 1.000 - - - - - - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
66. dok1a ENSDARG00000078108 9 1 - 1.000 - - - - - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
67. MYO15B ENSDARG00000074852 6 1 - 1.000 - - - - - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
68. si:dkey-222o15.5 si:dkey-222o15.5 27 1 - - - 1.000 - - - - -
69. CNTNAP5 CNTNAP5 20 1 - - - 1.000 - - - - -
70. mipa ENSDARG00000037285, ENSDARG00000116133 507 1 - 1.000 - - - - - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
71. CU693477.1 CU693477.1 7 1 - 1.000 - - - - - - -
72. dnajc5b ENSDARG00000058147 6 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
73. FAM132B FAM132B 39 1 - 1.000 - - - - - - -
74. FAM177B 9 1 - 1.000 - - - - - - - family with sequence similarity 177 member B
75. CU468012.1 ENSDARG00000077794 3 1 - - - - - 1.000 - - -
76. HEATR2 HEATR2 6 1 - - - - - 1.000 - - -
77. gbp2 ENSDARG00000038669 91 1 - 1.000 - - - - - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
78. KMO ENSDARG00000009160 1 1 - 1.000 - - - - - - - kynurenine 3-monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030424-4]
79. si:ch211-121a2.3 si:ch211-121a2.3 1 1 - - - 1.000 - - - - -
80. si:dkey-98j1.5 ENSDARG00000094005 10 1 - 1.000 - - - - - - - si:dkey-98j1.5 [Source:ZFIN;Acc:ZDB-GENE-090313-358]
81. zbtb47a ENSDARG00000057751 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 47a [Source:ZFIN;Acc:ZDB-GENE-081104-121]
82. rnf150a_1 ENSDARG00000024827 12 1 - - - 1.000 - - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
83. slc8a4a ENSDARG00000055154 90 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
84. CABZ01071909.3 CABZ01071909.3 14 1 - 1.000 - - - - - - -
85. si:dkey-37m8.8 si:dkey-37m8.8 1 1 - - - 1.000 - - - - -
86. CR394546.1 ENSDARG00000077602 1 1 - 1.000 - - - - - - -
87. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
88. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
89. cyp2x7 ENSDARG00000044002, ENSDARG00000109785 671 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily X, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-110114-2]
90. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1 - 1.000 - - - - - - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
91. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - 1.000 - - - - -
92. si:dkey-111e8.4 ENSDARG00000093547, ENSDARG00000115133 1 1 - - - 1.000 - - - - - si:dkey-111e8.4 [Source:ZFIN;Acc:ZDB-GENE-060526-191]
93. BICD2_1 BICD2_1 18 1 - - - 1.000 - - - - -
94. BX324215.3 BX324215.3 12 1 - - - - - 1.000 - - -
95. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
96. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - 1.000 - - - - - - -
97. BX511021.2 ENSDARG00000097646 5 1 - - - - - 1.000 - - -
98. rfxank ENSDARG00000016730 12 1 - 1.000 - - - - - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
99. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - - - 1.000 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
100. GPR82 GPR82 127 1 - - - - - 1.000 - - -

There are 812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA