Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpap3

Gene Name Gene ID Reads Annotation
rpap3 ENSDARG00000087962 22 RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]










Genes with expression patterns similar to rpap3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpap3 ENSDARG00000087962 22 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
2. GPR137B_1 GPR137B_1 8 2.38 - - - 0.714 - 0.962 - 0.704 -
3. si:dkey-40j3.1 si:dkey-40j3.1 1 2 - 1.000 - - - 1.000 - - -
4. CABZ01078124.1 CABZ01078124.1 4 1.881 - 1.000 - 0.881 - - - - -
5. cdc14aa ENSDARG00000013858 18 1.876 - 0.876 - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
6. si:ch211-105d18.8 si:ch211-105d18.8 38 1.866 - - 0.866 1.000 - - - - -
7. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.841 - - - 1.000 - 0.841 - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
8. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 1.828 - 1.000 0.828 - - - - - -
9. olig1 ENSDARG00000040948 1 1.778 - - - 1.000 0.778 - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
10. si:ch211-57m13.1 ENSDARG00000095927 1 1.778 - - - 1.000 0.778 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
11. im:7151068 im:7151068 2 1.778 - - - 1.000 0.778 - - - -
12. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1.773 - - - 0.773 - 1.000 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
13. shank3b ENSDARG00000063054 148 1.771 - - 0.806 - - 0.965 - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
14. LRTM1 ENSDARG00000098742 21 1.771 - 0.903 0.868 - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
15. edil3 edil3 24 1.755 - 1.000 0.755 - - - - - -
16. C7H15orf43 C7H15orf43 10 1.754 - 1.000 - - - 0.754 - - -
17. si:ch211-26b3.4 ENSDARG00000075491 50 1.734 - 1.000 0.734 - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
18. si:dkey-163m14.7 65 1.733 - 1.000 0.733 - - - - - - si:dkey-163m14.7
19. CCDC74B CCDC74B 8 1.731 - - - 0.731 - 1.000 - - -
20. si:dkey-43k4.4 si:dkey-43k4.4 4 1.728 - - - - - 1.000 - - 0.728
21. CABZ01065246.2 CABZ01065246.2 45 1.723 - 0.945 - - 0.778 - - - -
22. vps13d ENSDARG00000017986 183 1.713 - 0.903 0.810 - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
23. NETO2_1 NETO2_1 15 1.709 - 1.000 - - - 0.709 - - -
24. trim54 ENSDARG00000029907 10 1.705 - 1.000 - 0.705 - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
25. ANGEL1 ENSDARG00000077567 38 1.68 - 0.906 0.774 - - - - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
26. polm ENSDARG00000103470 49 1.593 - - 0.864 - - - - - 0.729 polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
27. MLF1IP MLF1IP 15 1.487 - - - - 0.778 - - - 0.709
28. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - 1.000 - - - - - - -
29. BX511066.4 BX511066.4 6 1 - - - 1.000 - - - - -
30. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - 1.000 - - - - -
31. dao.3 ENSDARG00000035601 15 1 - - - - - 1.000 - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
32. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - 1.000 - - - - - - -
33. XCR1 XCR1 9 1 - - - - - 1.000 - - -
34. C3AR1 18 1 - 1.000 - - - - - - - C3a anaphylatoxin chemotactic receptor
35. si:dkeyp-66d7.5 si:dkeyp-66d7.5 1 1 - - - - - 1.000 - - -
36. wu:fb63d05 wu:fb63d05 3 1 - - - 1.000 - - - - -
37. CU468012.1 ENSDARG00000077794 3 1 - - - - - 1.000 - - -
38. si:dkey-222o15.5 si:dkey-222o15.5 27 1 - - - 1.000 - - - - -
39. si:ch211-215m21.11 si:ch211-215m21.11 2 1 - - - 1.000 - - - - -
40. PDE4A ENSDARG00000032344 1 1 - - - 1.000 - - - - - phosphodiesterase 4A, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-131125-7]
41. gabrr2a ENSDARG00000052982 21 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
42. BX649314.1 BX649314.1 3 1 - - - - - 1.000 - - -
43. zap70 ENSDARG00000015752 1 1 - - - - - 1.000 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
44. si:ch211-10m5.3 si:ch211-10m5.3 10 1 - 1.000 - - - - - - -
45. rsad2 ENSDARG00000004952 1 1 - - - 1.000 - - - - - radical S-adenosyl methionine domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050913-129]
46. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - 1.000 - - - - - - -
47. uvssa ENSDARG00000100916 73 1 - - - - - 1.000 - - - UV-stimulated scaffold protein A [Source:ZFIN;Acc:ZDB-GENE-091204-111]
48. URB1_1 URB1_1 8 1 - 1.000 - - - - - - -
49. CR354382.1 CR354382.1 42 1 - 1.000 - - - - - - -
50. si:ch211-271e10.1 ENSDARG00000095735 15 1 - - - - - 1.000 - - - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
51. DTX4_1 ENSDARG00000076302 31 1 - 1.000 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
52. hdhd2 ENSDARG00000024728 5 1 - - - 1.000 - - - - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
53. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - - - 1.000 - - - - -
54. CST7 CST7 22 1 - - - - - 1.000 - - -
55. LARS2 ENSDARG00000075337 181 1 - - - - - 1.000 - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
56. BX323448.1 ENSDARG00000116236 10 1 - 1.000 - - - - - - -
57. itga11b ENSDARG00000007950 17 1 - - - - - 1.000 - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
58. SNORD35_2 SNORD35_2 5 1 - - - 1.000 - - - - -
59. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
60. tlx1 ENSDARG00000003965 67 1 - - - - - 1.000 - - - T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
61. si:dkey-71b5.3 ENSDARG00000095522 1 1 - 1.000 - - - - - - - si:dkey-71b5.3 [Source:ZFIN;Acc:ZDB-GENE-100922-91]
62. pde6b ENSDARG00000011671 44 1 - - - - - 1.000 - - - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
63. gbp2 ENSDARG00000038669 91 1 - 1.000 - - - - - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
64. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
65. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - 1.000 - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
66. fgf9 ENSDARG00000078625 2 1 - - - 1.000 - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
67. grtp1b ENSDARG00000030269 24 1 - - - - - 1.000 - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
68. mstna ENSDARG00000042947 1 1 - - - - - 1.000 - - - myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
69. MSH4 ENSDARG00000075826 37 1 - - - - - 1.000 - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
70. slc35g2a ENSDARG00000056262 52 1 - 1.000 - - - - - - - solute carrier family 35, member G2a [Source:ZFIN;Acc:ZDB-GENE-041114-202]
71. ENSDARG00000006874 ENSDARG00000006874 3 1 - 1.000 - - - - - - -
72. SNORD65 SNORD65 35 1 - - - - - 1.000 - - -
73. si:dkey-176f19.2 si:dkey-176f19.2 6 1 - - - 1.000 - - - - -
74. TRIM14_3 TRIM14_3 7 1 - - - - - 1.000 - - -
75. CABZ01071058.1 CABZ01071058.1 4 1 - - - 1.000 - - - - -
76. SNORD65_1 SNORD65_1 25 1 - - - - - 1.000 - - -
77. GCSH GCSH 0 1 - - - 1.000 - - - - -
78. insl5b ENSDARG00000069294 1 1 - - - - - 1.000 - - - insulin-like 5b [Source:ZFIN;Acc:ZDB-GENE-070122-5]
79. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
80. mir199-2 mir199-2 38 1 - 1.000 - - - - - - -
81. ZNF135_4 ZNF135_4 3 1 - - - - - 1.000 - - -
82. mthfsd ENSDARG00000062042 34 1 - - - - - 1.000 - - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
83. cyp2k19 ENSDARG00000101861 129 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1]
84. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - 1.000 - - - - - - -
85. ms4a17a.6 ENSDARG00000007018 6 1 - - - 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
86. si:ch211-214p13.7 1 1 - - - - - 1.000 - - - si:ch211-214p13.7
87. si:ch73-103b2.3 si:ch73-103b2.3 0 1 - - - 1.000 - - - - -
88. CR394546.1 ENSDARG00000077602 1 1 - 1.000 - - - - - - -
89. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
90. BX248410.1 ENSDARG00000090038 3 1 - - - 1.000 - - - - - Schwann cell myelin protein-like [Source:NCBI gene;Acc:101884775]
91. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - 1.000 - - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
92. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - - - 1.000 - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
93. NUGGC_3 NUGGC_3 10 1 - - - - - 1.000 - - -
94. ftr66 ENSDARG00000005327 1 1 - - - - - 1.000 - - - finTRIM family, member 66 [Source:ZFIN;Acc:ZDB-GENE-070912-661]
95. CABZ01111953.1 ENSDARG00000099747 38 1 - 1.000 - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
96. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - - - - - 1.000 - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
97. si:ch211-13b16.1 si:ch211-13b16.1 1 1 - - - 1.000 - - - - -
98. si:ch211-225p5.3 si:ch211-225p5.3 10 1 - - - 1.000 - - - - -
99. PEG3_29 PEG3_29 28 1 - - - - - 1.000 - - -
100. ZNF423 ENSDARG00000059707 11 1 - 1.000 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]

There are 812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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