Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpap1

Gene Name Gene ID Reads Annotation
rpap1 ENSDARG00000075072, ENSDARG00000117161 250 RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]










Genes with expression patterns similar to rpap1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpap1 ENSDARG00000075072, ENSDARG00000117161 250 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]
2. si:dkey-267k7.4 si:dkey-267k7.4 111 2.361 0.802 0.722 - - - 0.837 - - -
3. sik2a ENSDARG00000079618, ENSDARG00000115529 65 1.779 - - - 0.882 - - 0.897 - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
4. etaa1 ENSDARG00000074915 123 1.768 - - - 0.895 - 0.873 - - - ETAA1, ATR kinase activator [Source:ZFIN;Acc:ZDB-GENE-080204-12]
5. CABZ01039301.1 CABZ01039301.1 189 1.708 - - - 0.890 - 0.818 - - -
6. limk1b ENSDARG00000003022 172 1.707 0.865 - - 0.842 - - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
7. si:dkey-43f9.4 si:dkey-43f9.4 180 1.662 - - - 0.876 - 0.786 - - -
8. cenpj ENSDARG00000018121, ENSDARG00000113752 398 1.661 0.743 - - - - 0.918 - - - centromere protein J [Source:ZFIN;Acc:ZDB-GENE-030131-6323]
9. mcat ENSDARG00000016613, ENSDARG00000096473 140 1.66 0.804 - - 0.856 - - - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
10. si:dkey-220o10.1 si:dkey-220o10.1 63 1.644 0.819 - - - - 0.825 - - -
11. dennd6b ENSDARG00000011605 412 1.633 - - - - - 0.815 0.818 - - DENN/MADD domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-030131-9382]
12. si:dkey-11f4.14 ENSDARG00000098461 35 1.628 0.798 - - - - 0.830 - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
13. si:dkey-287i17.3 si:dkey-287i17.3 228 1.626 0.747 - - 0.879 - - - - -
14. si:dkey-10g2.5 si:dkey-10g2.5 72 1.614 0.813 - - - - 0.801 - - -
15. ssna1 ENSDARG00000101300 403 1.613 - - - 0.850 - 0.763 - - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
16. pcdh17 ENSDARG00000027041 260 1.61 0.700 - - 0.910 - - - - - protocadherin 17 [Source:ZFIN;Acc:ZDB-GENE-090608-3]
17. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.608 - 0.712 - 0.896 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
18. TOR4A TOR4A 70 1.597 - 0.731 - 0.866 - - - - -
19. epsti1 ENSDARG00000094578 33 1.585 - 0.809 - - - 0.776 - - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
20. C3H17orf53 C3H17orf53 191 1.573 - - - 0.868 - 0.705 - - -
21. il2rb ENSDARG00000075720 116 1.57 - - - - - 0.852 0.718 - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
22. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 1.562 - - - - - 0.803 0.759 - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
23. DIDO1 ENSDARG00000057940 312 1.557 - - - - - 0.702 0.855 - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
24. foxq1b ENSDARG00000055395 549 1.537 0.831 0.706 - - - - - - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
25. si:ch211-266d19.4 ENSDARG00000012642 1251 1.533 - - - 0.774 - - 0.759 - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
26. zgc:173702_1 ENSDARG00000110229 24 1.529 - 0.731 - - - 0.798 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
27. slc25a48 ENSDARG00000021250 1057 1.526 - - - 0.725 - 0.801 - - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
28. 5_8S_rRNA 5_8S_rRNA 24 1.526 - 0.712 - - - 0.814 - - -
29. si:dkey-238o14.5 si:dkey-238o14.5 450 1.516 0.733 - - - - - 0.783 - -
30. zgc:174178 zgc:174178 104 1.511 0.771 - - - - 0.740 - - -
31. BX321921.1 BX321921.1 525 1.504 - - - 0.739 - - 0.765 - -
32. chid1 ENSDARG00000069673 675 1.498 0.724 - - 0.774 - - - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
33. pld1b ENSDARG00000057125 325 1.49 0.751 - - 0.739 - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
34. smim12 ENSDARG00000070358 895 1.481 0.753 - - - - - 0.728 - - small integral membrane protein 12 [Source:ZFIN;Acc:ZDB-GENE-050320-101]
35. zdhhc13 ENSDARG00000101144 647 1.469 - - - 0.731 - - 0.738 - - zinc finger, DHHC-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-041212-79]
36. nfxl1 ENSDARG00000070127 392 1.427 0.704 - - 0.723 - - - - - nuclear transcription factor, X-box binding-like 1 [Source:ZFIN;Acc:ZDB-GENE-110411-178]
37. prkcbb ENSDARG00000022254 319 0.932 - - - - - 0.932 - - - protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
38. pitpnm3 ENSDARG00000055255 209 0.927 - 0.927 - - - - - - - PITPNM family member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9216]
39. igsf21b ENSDARG00000056084 6 0.923 - - - - - 0.923 - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
40. pih1d1 ENSDARG00000037955 301 0.923 - - - 0.923 - - - - - PIH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-147]
41. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 0.917 - - - - - 0.917 - - - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
42. ZFAT ENSDARG00000077987 205 0.915 - - - 0.915 - - - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
43. ltk ENSDARG00000042861, ENSDARG00000116109 76 0.915 - - - - - 0.915 - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
44. si:ch211-138a11.5 si:ch211-138a11.5 27 0.914 - - - - - 0.914 - - -
45. arhgap19 ENSDARG00000083189 210 0.91 - - - - - 0.910 - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
46. extl2 ENSDARG00000063191 118 0.907 - - - 0.907 - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
47. pip5k1ca ENSDARG00000076001 53 0.906 0.906 - - - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a [Source:ZFIN;Acc:ZDB-GENE-050208-358]
48. mtrf1l ENSDARG00000060005 177 0.903 - - - 0.903 - - - - - mitochondrial translational release factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-8198]
49. rorab ENSDARG00000001910, ENSDARG00000109324, ENSDARG00000113275 518 0.902 - - - 0.902 - - - - - RAR-related orphan receptor A, paralog b [Source:ZFIN;Acc:ZDB-GENE-040426-855]
50. dnajc12 ENSDARG00000086691 260 0.901 - 0.901 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
51. heca ENSDARG00000042877 200 0.901 - - - 0.901 - - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
52. zgc:171727 ENSDARG00000105781 350 0.899 - - - - - 0.899 - - - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
53. trmt2b ENSDARG00000033967 127 0.899 - - - - - 0.899 - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
54. myo10l1 ENSDARG00000074723 21 0.898 - - - - - 0.898 - - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
55. METTL12 METTL12 415 0.898 - - - 0.898 - - - - -
56. gng13b ENSDARG00000037921 215 0.897 - - - 0.897 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
57. CABZ01117079.1 CABZ01117079.1 123 0.897 - - - 0.897 - - - - -
58. FDXACB1 ENSDARG00000095750 98 0.896 - - - 0.896 - - - - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
59. ldhd ENSDARG00000038845 110 0.895 - 0.895 - - - - - - - lactate dehydrogenase D [Source:ZFIN;Acc:ZDB-GENE-030131-6140]
60. CT025914.2 CT025914.2 53 0.895 - - - 0.895 - - - - -
61. si:dkey-14k9.3 ENSDARG00000045595 256 0.894 - - - - - 0.894 - - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
62. dffb ENSDARG00000009748 204 0.894 - - - - - - 0.894 - - DNA fragmentation factor, beta polypeptide (caspase-activated DNase) [Source:ZFIN;Acc:ZDB-GENE-030826-4]
63. lmx1a ENSDARG00000020354 111 0.894 - - - 0.894 - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
64. CU207301.10 CU207301.10 67 0.892 - - - 0.892 - - - - -
65. ing5b ENSDARG00000068175 2502 0.892 - - - - - - 0.892 - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
66. mgmt ENSDARG00000043275, ENSDARG00000111616 169 0.892 - - - 0.892 - - - - - O-6-methylguanine-DNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-120614-1]
67. capn7 ENSDARG00000102987 386 0.891 - - - 0.891 - - - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
68. stmn4 ENSDARG00000030106 518 0.891 - - - 0.891 - - - - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
69. otomp ENSDARG00000040306 682 0.891 - - - - - 0.891 - - - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
70. si:ch73-27e22.6 ENSDARG00000031731 12 0.891 - - - - - 0.891 - - - si:ch73-27e22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-234]
71. nif3l1 ENSDARG00000045249 28 0.89 - - - 0.890 - - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
72. mamdc2b ENSDARG00000073695 26 0.89 - - - 0.890 - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
73. scamp1 ENSDARG00000036911 103 0.89 - - - 0.890 - - - - - secretory carrier membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1803]
74. GALNT3 ENSDARG00000108649 356 0.889 - - - 0.889 - - - - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
75. igf2bp2a ENSDARG00000003421 2810 0.889 - - - 0.889 - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
76. si:ch211-136m16.8 ENSDARG00000090767 91 0.889 - - - 0.889 - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
77. kcnh6 kcnh6 59 0.888 - - - 0.888 - - - - -
78. PAMR1 ENSDARG00000093480 40 0.888 - - - - - 0.888 - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
79. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.887 - - - 0.887 - - - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
80. si:ch211-250m6.8 si:ch211-250m6.8 51 0.887 - - - 0.887 - - - - -
81. asic1b ENSDARG00000101866 61 0.886 - - - 0.886 - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
82. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 0.885 - - - 0.885 - - - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
83. CNST CNST 540 0.884 - - - 0.884 - - - - -
84. si:dkey-154b15.1 ENSDARG00000057010 85 0.884 - 0.884 - - - - - - - si:dkey-154b15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-52]
85. dlec1 ENSDARG00000075825 60 0.884 - - - 0.884 - - - - - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
86. lrwd1 ENSDARG00000035147 464 0.883 - - - - - 0.883 - - - leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]
87. CABZ01086354.1_1 CABZ01086354.1_1 89 0.883 - - - 0.883 - - - - -
88. CLCC1 155 0.883 - 0.883 - - - - - - - chloride channel CLIC-like 1, transcript variant X2
89. dus1l ENSDARG00000089260 336 0.883 - - - 0.883 - - - - - dihydrouridine synthase 1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1435]
90. si:ch211-274p24.5 si:ch211-274p24.5 122 0.883 - - - 0.883 - - - - -
91. csde1 ENSDARG00000074758 172 0.882 - - - 0.882 - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
92. pif1 ENSDARG00000020289 216 0.882 - - - - - - 0.882 - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
93. AREL1 ENSDARG00000100359 260 0.881 - - - 0.881 - - - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
94. dcp1b ENSDARG00000045484 534 0.881 - - - 0.881 - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
95. si:ch211-263m18.4 ENSDARG00000093353 27 0.881 - - - - - 0.881 - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
96. sesn2 ENSDARG00000070012 294 0.88 - - - - - 0.880 - - - sestrin 2 [Source:ZFIN;Acc:ZDB-GENE-070108-1]
97. kcnf1a ENSDARG00000027940 155 0.88 - - - 0.880 - - - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
98. prr18 ENSDARG00000093768 409 0.88 - - - 0.880 - - - - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
99. mms22l ENSDARG00000074691 232 0.88 - - - 0.880 - - - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
100. TMEM186 ENSDARG00000074264, ENSDARG00000109974 245 0.88 - - - - - 0.880 - - - transmembrane protein 186 [Source:ZFIN;Acc:ZDB-GENE-081022-122]

There are 1063 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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