Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpain

Gene Name Gene ID Reads Annotation
rpain ENSDARG00000063021 186 RPA interacting protein [Source:ZFIN;Acc:ZDB-GENE-060825-212]










Genes with expression patterns similar to rpain

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpain ENSDARG00000063021 186 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RPA interacting protein [Source:ZFIN;Acc:ZDB-GENE-060825-212]
2. morc3a ENSDARG00000056679 648 2.191 0.747 0.710 - - - - - 0.734 - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
3. dlx6a ENSDARG00000042291 185 1.709 0.930 - - - - - - 0.779 - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
4. C24H18orf8 C24H18orf8 87 1.698 - 0.872 - - - - - 0.826 -
5. si:ch211-139n6.3 ENSDARG00000093230 147 1.671 - 0.830 - - - - - 0.841 - si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
6. spire1a ENSDARG00000035868, ENSDARG00000109651 185 1.654 0.791 - - - - - 0.863 - - spire-type actin nucleation factor 1a [Source:ZFIN;Acc:ZDB-GENE-061013-119]
7. CLINT1 CLINT1 558 1.642 0.759 0.883 - - - - - - -
8. CABZ01032467.1 CABZ01032467.1 400 1.641 - 0.905 - - - - - 0.736 -
9. si:ch211-147d7.5 ENSDARG00000095457 132 1.601 - - - - - - 0.765 0.836 - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
10. gnai2b ENSDARG00000017294 686 1.588 0.818 - - - - - - 0.770 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
11. si:dkeyp-86h10.3 ENSDARG00000095615 253 1.581 0.794 0.787 - - - - - - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
12. cc2d1b ENSDARG00000099445 253 1.575 - 0.842 - - - 0.733 - - - coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]
13. DOCK1 ENSDARG00000099093 21 1.574 0.795 0.779 - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
14. tcp11l1 ENSDARG00000031890 257 1.549 - 0.842 - - - 0.707 - - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
15. vhll ENSDARG00000078613 87 1.538 - - - - - - 0.760 0.778 - von Hippel-Lindau tumor suppressor like [Source:ZFIN;Acc:ZDB-GENE-081022-78]
16. fancc ENSDARG00000055232, ENSDARG00000116499 50 1.537 0.835 0.702 - - - - - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
17. FBXO38 ENSDARG00000006924 307 1.532 0.749 - - - - 0.783 - - - F-box protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-2797]
18. cmyb cmyb 274 1.525 0.773 - - - - - 0.752 - -
19. MAL_1 MAL_1 200 1.524 - - - - - - 0.700 0.824 -
20. PEG3_11 PEG3_11 167 1.523 - - - - - 0.815 0.708 - -
21. rtn4rl1a ENSDARG00000007856 242 1.518 0.786 - - - - 0.732 - - - reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]
22. MARVELD3 ENSDARG00000099654 325 1.511 - 0.802 - - - - - 0.709 - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
23. EHD2 EHD2 23 1.506 - 0.737 - - - 0.769 - - -
24. tbcc ENSDARG00000022918 386 1.503 0.789 0.714 - - - - - - - tubulin folding cofactor C [Source:ZFIN;Acc:ZDB-GENE-041008-103]
25. smad6a ENSDARG00000053209, ENSDARG00000110519 779 1.496 0.768 - - - - - 0.728 - - SMAD family member 6a [Source:ZFIN;Acc:ZDB-GENE-011015-1]
26. si:ch73-362m14.2 ENSDARG00000090164 47 1.493 0.770 0.723 - - - - - - - si:ch73-362m14.2 [Source:ZFIN;Acc:ZDB-GENE-120215-235]
27. tmem79b ENSDARG00000076861 154 1.491 - - - - - 0.714 - 0.777 - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
28. si:ch211-253p2.2 ENSDARG00000071772 64 1.49 0.757 - - - - 0.733 - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
29. dlx1a ENSDARG00000013125 142 1.49 - 0.763 - - - 0.727 - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
30. DIP2C DIP2C 222 1.486 - 0.707 - - - - - 0.779 -
31. wu:fc28f08 wu:fc28f08 188 1.483 0.751 - 0.732 - - - - - -
32. cyp2k8 ENSDARG00000101190 69 1.48 - 0.770 - - - 0.710 - - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
33. MMP15 MMP15 88 1.469 0.714 - - - - - 0.755 - -
34. TBC1D10B ENSDARG00000078604, ENSDARG00000114712 453 1.466 0.732 - - - - 0.734 - - - TBC1 domain family, member 10b [Source:ZFIN;Acc:ZDB-GENE-030131-7754]
35. lygl1 ENSDARG00000056874 309 1.456 - - - - - - 0.729 0.727 - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
36. phyh ENSDARG00000086740 88 1.448 - - 0.744 - - 0.704 - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
37. fam126a ENSDARG00000026762 1120 1.448 - 0.744 - - - 0.704 - - - family with sequence similarity 126, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1806]
38. CD97_1 CD97_1 197 1.442 - 0.732 - - - - 0.710 - -
39. prkacab ENSDARG00000016809 1441 1.431 0.718 - - - - 0.713 - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
40. mxra5b ENSDARG00000076309 190 1.408 - - - - - 0.704 - 0.704 - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
41. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 1.406 0.703 - - - - 0.703 - - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
42. tbrg1 ENSDARG00000074996 733 0.952 0.952 - - - - - - - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
43. socs3b ENSDARG00000026611 262 0.944 0.944 - - - - - - - - suppressor of cytokine signaling 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2528]
44. CR391961.2 CR391961.2 107 0.939 - 0.939 - - - - - - -
45. hmga1b ENSDARG00000070951 377 0.938 0.938 - - - - - - - - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
46. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.934 0.934 - - - - - - - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
47. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 0.933 0.933 - - - - - - - -
48. duox ENSDARG00000062632 1406 0.912 0.912 - - - - - - - - dual oxidase [Source:ZFIN;Acc:ZDB-GENE-091117-14]
49. spag6 ENSDARG00000020158 218 0.91 - 0.910 - - - - - - - sperm associated antigen 6 [Source:ZFIN;Acc:ZDB-GENE-040704-53]
50. KRT23 KRT23 1443 0.909 0.909 - - - - - - - -
51. ccnd2b ENSDARG00000070408 411 0.907 0.907 - - - - - - - - cyclin D2, b [Source:ZFIN;Acc:ZDB-GENE-050420-354]
52. thap11 ENSDARG00000036055 238 0.905 0.905 - - - - - - - - THAP domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2121]
53. efhc1 ENSDARG00000009743 113 0.905 - 0.905 - - - - - - - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
54. sepn1 801 0.9 - 0.900 - - - - - - - selenoprotein N, 1
55. cdt1 ENSDARG00000051854 206 0.897 - - - - - - - 0.897 - chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]
56. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 0.89 0.890 - - - - - - - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
57. si:dkey-286j17.3 si:dkey-286j17.3 8 0.89 0.890 - - - - - - - -
58. ssrp1b ENSDARG00000016994 58 0.89 0.890 - - - - - - - - structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
59. adamts6 ENSDARG00000041982 320 0.888 - - - - - - 0.888 - - ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
60. ANO9 ANO9 688 0.887 - 0.887 - - - - - - -
61. phf10 ENSDARG00000070084 1210 0.886 - 0.886 - - - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
62. thumpd2 ENSDARG00000093070 154 0.882 - 0.882 - - - - - - - THUMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090428-2]
63. dhrs9 ENSDARG00000019260 250 0.881 0.881 - - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
64. bmi1b ENSDARG00000013076 1020 0.877 - - - - - 0.877 - - - bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
65. DCUN1D3 ENSDARG00000011493 319 0.872 0.872 - - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-2]
66. rab25a ENSDARG00000058800 451 0.872 0.872 - - - - - - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
67. plk4 ENSDARG00000004576 688 0.871 0.871 - - - - - - - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
68. otof otof 127 0.869 - - - - - 0.869 - - -
69. noxo1b ENSDARG00000056374 78 0.867 - 0.867 - - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
70. si:dkey-225d17.2 si:dkey-225d17.2 361 0.866 - 0.866 - - - - - - -
71. arhgap22 ENSDARG00000021255 117 0.863 - - - - - - - 0.863 - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
72. lect2l ENSDARG00000033227 482 0.863 - 0.863 - - - - - - - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
73. NECAB3 ENSDARG00000074794 379 0.86 0.860 - - - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
74. htra1b ENSDARG00000014907 146 0.859 - - - - - - - 0.859 - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
75. emx3 ENSDARG00000020417 85 0.858 - - - - - - - 0.858 - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
76. znf148 ENSDARG00000055106 528 0.858 0.858 - - - - - - - - zinc finger protein 148 [Source:ZFIN;Acc:ZDB-GENE-030131-8769]
77. rin1a ENSDARG00000079095 99 0.856 - - - - 0.856 - - - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
78. PLEKHO2 ENSDARG00000016774 454 0.855 - 0.855 - - - - - - - pleckstrin homology domain containing, family O member 2 [Source:ZFIN;Acc:ZDB-GENE-120406-4]
79. igf3 ENSDARG00000058058 19 0.854 - 0.854 - - - - - - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
80. CU856359.2 CU856359.2 182 0.853 - - - - - - - 0.853 -
81. MYO9B ENSDARG00000078313 97 0.852 - - - - - - - 0.852 - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
82. AL928724.1 ENSDARG00000097525 421 0.852 - 0.852 - - - - - - -
83. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 0.852 - - - - - - - 0.852 - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
84. zgc:174917 ENSDARG00000073820 6 0.852 - 0.852 - - - - - - - zgc:174917 [Source:ZFIN;Acc:ZDB-GENE-070928-42]
85. itga11b ENSDARG00000007950 17 0.852 - 0.852 - - - - - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
86. lrrc40 ENSDARG00000017708 1156 0.851 - 0.851 - - - - - - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
87. CR762484.2 CR762484.2 42 0.85 0.850 - - - - - - - -
88. C9H3orf38 C9H3orf38 83 0.848 - - - - - - - 0.848 -
89. fmnl2a ENSDARG00000012586 136 0.848 0.848 - - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
90. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.848 - - - - - - - 0.848 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
91. si:dkey-16p19.5 ENSDARG00000092583 284 0.848 0.848 - - - - - - - - si:dkey-16p19.5 [Source:ZFIN;Acc:ZDB-GENE-120709-69]
92. atad1a ENSDARG00000023267 155 0.847 0.847 - - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
93. si:ch73-74h11.1 ENSDARG00000062750 158 0.847 - 0.847 - - - - - - - si:ch73-74h11.1 [Source:ZFIN;Acc:ZDB-GENE-091204-215]
94. pus7l_1 ENSDARG00000069780 49 0.847 - - - - - - - 0.847 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
95. WAPAL_1 WAPAL_1 205 0.847 0.847 - - - - - - - -
96. CABZ01069020.1 ENSDARG00000105806 19 0.847 - - - - - - - 0.847 - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
97. si:dkey-231k6.4 si:dkey-231k6.4 72 0.847 0.847 - - - - - - - -
98. map7d3 ENSDARG00000060771 1739 0.847 - 0.847 - - - - - - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
99. si:ch211-149a19.3 ENSDARG00000079456 115 0.846 - - - - - - - 0.846 - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
100. CLMP 108 0.845 0.845 - - - - - - - - CXADR like membrane protein

There are 843 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA