Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rpa2

Gene Name Gene ID Reads Annotation
rpa2 ENSDARG00000037188 4284 replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]










Genes with expression patterns similar to rpa2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpa2 ENSDARG00000037188 4284 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
2. zgc:77262 ENSDARG00000044545 5563 2.631 - - 0.722 - 0.919 0.990 - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
3. ing5b ENSDARG00000068175 2502 2.584 - - - 0.993 - - 0.745 - 0.846 inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
4. pygma ENSDARG00000055518 15972 2.55 - 0.823 - 0.931 - 0.796 - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
5. eif2s3 ENSDARG00000008292 17051 2.463 - 0.761 - - 0.813 0.889 - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
6. cdkn2aipnl ENSDARG00000053395 5107 2.457 - 0.783 0.751 - 0.923 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
7. mrpl27 ENSDARG00000032985 2158 2.443 0.814 0.809 - - 0.820 - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
8. wdr33 ENSDARG00000018272 4076 2.4 - 0.712 0.795 - 0.893 - - - - WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
9. sf3b14 sf3b14 9434 2.391 - - - - 0.711 0.879 - 0.801 -
10. znf592 ENSDARG00000060885 776 2.365 - 0.743 - - - - 0.756 - 0.866 zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
11. rps8a ENSDARG00000055996 2785 1.979 - - - 0.989 - 0.990 - - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
12. scrt2 ENSDARG00000056175 4331 1.925 - - - 0.995 0.930 - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
13. mier1a ENSDARG00000041072 1690 1.906 - - - - 0.910 0.996 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
14. ak2 ENSDARG00000005926 7598 1.868 - - - 0.993 0.875 - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
15. trim33 ENSDARG00000016181 1718 1.856 - - - - - 0.996 - - 0.860 tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
16. PACS1 PACS1 2061 1.85 - - - 0.992 0.858 - - - -
17. zfand5a ENSDARG00000018898 3308 1.821 - - - - - 0.988 - - 0.833 zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]
18. axin2 ENSDARG00000100149 4223 1.815 - - - - - 0.991 - - 0.824 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
19. cdc42se1 ENSDARG00000023724 3901 1.809 - - - - 0.820 0.989 - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
20. rnf7 ENSDARG00000055524 3390 1.808 - - - - - 0.990 - - 0.818 ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
21. BSCL2 ENSDARG00000037008 689 1.804 - - - - - 0.989 - - 0.815 Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
22. sec62 ENSDARG00000019951 3724 1.794 - - - - - 0.995 - - 0.799 SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
23. ndufab1b ENSDARG00000014915 12796 1.791 - 0.818 - 0.973 - - - - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
24. inppl1a ENSDARG00000104222 6256 1.783 - - - 0.987 - 0.796 - - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
25. pou6f1 ENSDARG00000011570 1501 1.78 - - - 0.994 - - 0.786 - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
26. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 1.769 - - - - - 0.977 - - 0.792 si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
27. kif11 ENSDARG00000010948 4973 1.765 - 0.774 - 0.991 - - - - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
28. tmed7 ENSDARG00000046022 2435 1.764 - - - - - 0.998 0.766 - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
29. MAF1 ENSDARG00000013122 6899 1.756 - - - - - 0.970 - - 0.786 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
30. phb2 phb2 3209 1.748 - 0.754 - - - 0.994 - - -
31. nrf1 ENSDARG00000000018 4683 1.738 - - 0.756 - - 0.982 - - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
32. dusp11 ENSDARG00000038156 2490 1.73 - - - - 0.857 - - - 0.873 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
33. ssr2 ENSDARG00000005230 31940 1.724 - - - 0.966 - - - - 0.758 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
34. shfm1 7620 1.724 - - - 0.989 - - 0.735 - - split hand/foot malformation (ectrodactyly) type 1
35. pl10 pl10 10795 1.72 - 0.746 - 0.974 - - - - -
36. poc1bl ENSDARG00000012745 2451 1.719 - - - - 0.819 0.900 - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
37. EEF1E1 ENSDARG00000071774 3806 1.718 - 0.725 - 0.993 - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
38. ezh2 ENSDARG00000010571 3273 1.707 - - 0.784 - 0.923 - - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
39. nucks1b ENSDARG00000012777 4468 1.701 - - 0.781 - - - - - 0.920 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
40. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 1.699 - - - 0.992 - - - 0.707 - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
41. CABZ01039859.1 ENSDARG00000076361 540 1.698 - - - - - 0.983 0.715 - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
42. lrrc20 ENSDARG00000105018 1970 1.697 - 0.703 - - - 0.994 - - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
43. rbb4l ENSDARG00000015208 5542 1.696 - - 0.704 0.992 - - - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
44. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.695 - 0.709 - - - 0.986 - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
45. APOD APOD 3404 1.693 - - - - - 0.986 - - 0.707
46. MDC1 ENSDARG00000086764 1851 1.687 - 0.801 - - 0.886 - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
47. cnpy1 ENSDARG00000003757 1132 1.683 - - - - 0.863 - - - 0.820 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
48. ruvbl1 ENSDARG00000002591 2381 1.68 - - - - - - - 0.756 0.924 RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
49. drap1 ENSDARG00000041203 6749 1.675 - 0.821 0.854 - - - - - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
50. fubp1 ENSDARG00000029248 15259 1.669 - - - - 0.894 0.775 - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
51. ufm1 ENSDARG00000043857 4152 1.664 - - - - 0.814 - - - 0.850 ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
52. ehd3 ENSDARG00000007869 3238 1.662 - - - - 0.805 - - - 0.857 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
53. thoc7 ENSDARG00000015394 3824 1.658 - 0.735 - - - - - - 0.923 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
54. cdc20 ENSDARG00000100741 3264 1.654 - - 0.740 - - - - - 0.914 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
55. brd7 ENSDARG00000008380 3654 1.653 - 0.765 - - 0.888 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
56. rhebl1 ENSDARG00000039162 3966 1.653 - 0.780 - - - - - - 0.873 Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
57. ube2i2 ube2i2 4828 1.652 - - - - - - - 0.805 0.847
58. gipc1 ENSDARG00000104483 2913 1.643 - 0.745 - - - - - - 0.898 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
59. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.643 - - - - 0.818 - - - 0.825 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
60. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 1.642 - - - - 0.850 - 0.792 - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
61. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.641 - - - 0.855 0.786 - - - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
62. si:ch211-161h7.4 ENSDARG00000087238 4399 1.632 - 0.702 - - 0.930 - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
63. lrpprc ENSDARG00000043970 3847 1.632 - 0.839 - - - - - - 0.793 leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
64. MKI67 ENSDARG00000091150 11038 1.632 - - - - 0.883 - 0.749 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
65. mfap2 ENSDARG00000059367 3774 1.631 - - - - 0.820 - - - 0.811 microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
66. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.629 - - 0.773 - - - - - 0.856 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
67. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.623 - - 0.740 - 0.883 - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
68. qars ENSDARG00000010316 2715 1.619 - 0.768 - - - - - - 0.851 glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
69. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.617 - - - - 0.859 - - - 0.758 thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
70. GABARAP GABARAP 8341 1.614 - - - - 0.825 - - - 0.789
71. THOP1 ENSDARG00000013776 2717 1.609 - 0.866 - - - - - - 0.743 thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
72. ranbp9 ENSDARG00000061048 2687 1.607 - - - - 0.886 - 0.721 - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
73. plecb ENSDARG00000021987 13621 1.604 - 0.779 - - - 0.825 - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
74. cct5 ENSDARG00000045399 11572 1.602 - 0.783 - 0.819 - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
75. ppp2r5eb ENSDARG00000069118 1902 1.602 0.749 - - - - - - - 0.853 protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
76. ddx49 ENSDARG00000012899 1604 1.599 - 0.762 - - 0.837 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
77. kpnb3 ENSDARG00000040245 7967 1.591 - 0.798 - - - - - - 0.793 karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
78. BRPF3 BRPF3 458 1.586 - - - - - - 0.740 - 0.846
79. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.584 - - - - - - 0.766 - 0.818 putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
80. C16H8orf76 C16H8orf76 329 1.584 - - - - - - 0.757 - 0.827
81. si:dkey-13i19.8 ENSDARG00000093058 4617 1.576 - 0.797 - - - - - - 0.779 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
82. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.573 - 0.767 - - - - - - 0.806 prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
83. anxa2a ENSDARG00000003216 10684 1.567 - 0.734 - - - 0.833 - - - annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
84. gemin8 ENSDARG00000053496, ENSDARG00000115240 1214 1.562 - - - - - - 0.710 - 0.852 gem (nuclear organelle) associated protein 8 [Source:ZFIN;Acc:ZDB-GENE-041114-189]
85. rbmx ENSDARG00000014244 3445 1.555 - 0.847 - - - - 0.708 - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
86. gas1a ENSDARG00000077298 10891 1.553 - - - - 0.777 0.776 - - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
87. edem1 ENSDARG00000025094 1343 1.552 - - - - - - 0.749 - 0.803 ER degradation enhancer, mannosidase alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-808]
88. CAMTA2 ENSDARG00000092799 1950 1.551 - - - - - - 0.748 - 0.803 calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
89. nfe2l3 ENSDARG00000019810 3682 1.55 - - 0.707 - - - - - 0.843 nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
90. BX548000.3 BX548000.3 241 1.549 - - - - 0.847 - 0.702 - -
91. kmt2bb ENSDARG00000060697 5230 1.543 - - - - 0.815 - - - 0.728 lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
92. sly1 sly1 2403 1.539 - 0.732 - - - - - - 0.807
93. nutf2l ENSDARG00000014499 3927 1.534 - - - - - - 0.769 - 0.765 nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
94. grpel2 ENSDARG00000069421 5673 1.526 - 0.794 - - - - - - 0.732 GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
95. creb3l2 ENSDARG00000063563 1284 1.525 - - - - - - 0.756 - 0.769 cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
96. wnk1b ENSDARG00000039392 3587 1.524 - 0.740 - - - - - - 0.784 WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
97. BX294434.1 ENSDARG00000061272 6493 1.516 - 0.722 - - 0.794 - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
98. timm8b ENSDARG00000055708 7291 1.514 - 0.776 - - 0.738 - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
99. hcls1 ENSDARG00000012729 1547 1.511 - - - - - - 0.750 - 0.761 hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
100. zgc:162356 zgc:162356 5115 1.506 - 0.718 - - - - - - 0.788

There are 1533 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA