Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rp9

Gene Name Gene ID Reads Annotation
rp9 ENSDARG00000098942 3172 RP9, pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]










Genes with expression patterns similar to rp9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rp9 ENSDARG00000098942 3172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RP9, pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]
2. hnrnpk ENSDARG00000018914 8841 2.354 - 0.891 - - 0.732 - 0.731 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
3. ovol1 1037 1.831 - 0.967 - - - - - 0.864 - ovo-like zinc finger 1, transcript variant X1
4. arcn1b ENSDARG00000031214 4529 1.797 - 0.959 - - 0.838 - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
5. mthfd1l ENSDARG00000042221, ENSDARG00000110473 19571 1.758 - 0.874 - - 0.884 - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
6. tango2 ENSDARG00000056550 1130 1.739 - 0.991 - - - - - 0.748 - transport and golgi organization 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040808-42]
7. pkd2 ENSDARG00000014098 2384 1.728 - 0.985 - - - - 0.743 - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
8. erlin1 ENSDARG00000021991 5664 1.717 - 0.986 - - - - 0.731 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
9. prr12a ENSDARG00000074229 1668 1.716 - 0.984 - - - - 0.732 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
10. CABZ01027552.1 CABZ01027552.1 760 1.704 - - - - 0.857 - - 0.847 -
11. ppp2r5cb ENSDARG00000031200 1832 1.691 - 0.983 - - - - 0.708 - - protein phosphatase 2, regulatory subunit B', gamma b [Source:ZFIN;Acc:ZDB-GENE-041014-4]
12. tox4 tox4 1671 1.686 - 0.985 - - - - 0.701 - -
13. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.686 - - - - 0.852 - - 0.834 - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
14. u2surp ENSDARG00000061490 2814 1.676 - 0.963 - - - 0.713 - - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
15. sdhb ENSDARG00000075768 5493 1.662 - 0.962 - - - - 0.700 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
16. kdm6bb ENSDARG00000056929 4807 1.658 - - - - 0.867 - 0.791 - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
17. atpif1a 6030 1.656 - 0.935 - - - - 0.721 - - ATPase inhibitory factor 1a
18. cog4 ENSDARG00000054264 785 1.65 - - - - 0.853 - - 0.797 - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
19. msna ENSDARG00000058128, ENSDARG00000114614 23727 1.637 - 0.715 - - 0.922 - - - - moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
20. zcchc17 ENSDARG00000018936 1577 1.617 - - - - - - 0.779 0.838 - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
21. slc20a1b ENSDARG00000010641 2564 1.601 - - - - 0.848 - 0.753 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
22. fam20b ENSDARG00000008573 1084 1.594 - - - - - - 0.748 0.846 - family with sequence similarity 20, member B (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-040724-125]
23. ccdc53 982 1.59 - - - - 0.856 - - 0.734 - coiled-coil domain containing 53
24. actr1 ENSDARG00000011611 3879 1.589 - - - - 0.860 - 0.729 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
25. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.585 - - - - 0.847 - 0.738 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
26. ssbp3b ENSDARG00000030155 7163 1.584 - - - - 0.775 - 0.809 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
27. rasl11a ENSDARG00000046013 1627 1.581 - - - - - - 0.746 0.835 - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
28. clgn ENSDARG00000009315 993 1.58 - - - - 0.849 - - 0.731 - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
29. psmb2 ENSDARG00000031511 4016 1.548 - - - - - 0.733 0.815 - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
30. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.481 - - - - - 0.718 0.763 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
31. emc1 ENSDARG00000057255 3582 1.453 - - - - - - 0.706 0.747 - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
32. naa15a ENSDARG00000003213 5889 1.444 - - - - - 0.729 0.715 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
33. ubr5 ENSDARG00000018192 9267 1.443 - - - - 0.709 - 0.734 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
34. celf1 ENSDARG00000005315 5598 1.428 0.717 - - - - - 0.711 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
35. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 1.412 - - - - 0.703 - 0.709 - - pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
36. PTP4A3 ENSDARG00000039997 3814 1.411 0.702 - - - - 0.709 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
37. sp1 ENSDARG00000088347 1697 0.988 - 0.988 - - - - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
38. aamp ENSDARG00000045019 2818 0.988 - 0.988 - - - - - - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
39. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 0.987 - 0.987 - - - - - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
40. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 0.987 - 0.987 - - - - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
41. rnf2 ENSDARG00000010381 3427 0.987 - 0.987 - - - - - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
42. AL929204.1 AL929204.1 773 0.987 - 0.987 - - - - - - -
43. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.987 - 0.987 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
44. cdk11b ENSDARG00000102546 1579 0.986 - 0.986 - - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
45. nol11 ENSDARG00000026767 2528 0.986 - 0.986 - - - - - - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
46. wdr5 ENSDARG00000016903 4834 0.986 - 0.986 - - - - - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
47. kif13ba ENSDARG00000079731 1726 0.986 - 0.986 - - - - - - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
48. meis4.1a meis4.1a 1165 0.985 - 0.985 - - - - - - -
49. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.985 - 0.985 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
50. cnot3b ENSDARG00000019842 838 0.985 - 0.985 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
51. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 0.985 - 0.985 - - - - - - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
52. eny2 ENSDARG00000070046 3741 0.985 - 0.985 - - - - - - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
53. larp1 ENSDARG00000101722 976 0.985 - 0.985 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
54. acadsb ENSDARG00000076780 2382 0.985 - 0.985 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
55. eya3 ENSDARG00000036100 1965 0.985 - 0.985 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
56. ptpn9a ENSDARG00000077495 2295 0.985 - 0.985 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
57. SKA2 ENSDARG00000114038 1448 0.985 - 0.985 - - - - - - - spindle and kinetochore associated complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041008-202]
58. si:ch211-218c6.8 ENSDARG00000092364 1270 0.985 - 0.985 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
59. igf2b ENSDARG00000033307, ENSDARG00000116125 1537 0.985 - 0.985 - - - - - - - insulin-like growth factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2935]
60. tnfrsf19 ENSDARG00000041869 796 0.985 - 0.985 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
61. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.984 - 0.984 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
62. fosl2 ENSDARG00000040623 2041 0.984 - 0.984 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
63. im:7136729 im:7136729 1625 0.984 - 0.984 - - - - - - -
64. si:ch211-121a2.2 ENSDARG00000039682 1240 0.984 - 0.984 - - - - - - - si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]
65. rerea ENSDARG00000077353 4162 0.984 - 0.984 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
66. psma6a ENSDARG00000019398 2702 0.984 - 0.984 - - - - - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
67. MDP1 MDP1 687 0.984 - 0.984 - - - - - - -
68. chpfa ENSDARG00000078392 1427 0.984 - 0.984 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
69. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 0.984 - 0.984 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
70. arid1ab ENSDARG00000101891 1722 0.984 - 0.984 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
71. BRCC3 ENSDARG00000098242 1123 0.984 - 0.984 - - - - - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
72. pip4k2aa ENSDARG00000003776 865 0.984 - 0.984 - - - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
73. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.983 - 0.983 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
74. ndufs1 ENSDARG00000028546 5795 0.983 - 0.983 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
75. C25H1orf51 C25H1orf51 2460 0.983 - 0.983 - - - - - - -
76. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 0.983 - 0.983 - - - - - - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
77. ptk6a ENSDARG00000017947 682 0.983 - 0.983 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
78. pax9 ENSDARG00000053829 1193 0.983 - 0.983 - - - - - - - paired box 9 [Source:ZFIN;Acc:ZDB-GENE-980526-399]
79. TBC1D4 ENSDARG00000075156 2503 0.983 - 0.983 - - - - - - - TBC1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9881]
80. DUSP28 ENSDARG00000059695 1135 0.983 - 0.983 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
81. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.983 - 0.983 - - - - - - - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
82. zfyve28 ENSDARG00000060430 797 0.983 - 0.983 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
83. cttnbp2 ENSDARG00000040991 1697 0.983 - 0.983 - - - - - - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
84. si:dkey-9i23.11 si:dkey-9i23.11 3818 0.983 - 0.983 - - - - - - -
85. ube2e2 ENSDARG00000034670 5918 0.983 - 0.983 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
86. ncor2 ENSDARG00000000966 3352 0.983 - 0.983 - - - - - - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
87. ncapd2 ENSDARG00000005058 2819 0.983 - 0.983 - - - - - - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
88. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 0.983 - 0.983 - - - - - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
89. mis18a ENSDARG00000035333 555 0.982 - 0.982 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
90. cebpa ENSDARG00000036074 751 0.982 - 0.982 - - - - - - - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
91. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 0.982 - 0.982 - - - - - - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
92. pfkfb3 ENSDARG00000001953 656 0.982 - 0.982 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
93. csrnp2 ENSDARG00000075972 1650 0.982 - 0.982 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
94. wipf1 wipf1 760 0.982 - 0.982 - - - - - - -
95. ubn2 ubn2 534 0.981 - 0.981 - - - - - - -
96. tsc22d1 ENSDARG00000038306 2413 0.981 - 0.981 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
97. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 0.981 - 0.981 - - - - - - - translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
98. cse1l ENSDARG00000006963 3261 0.981 - 0.981 - - - - - - - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
99. mxra7 ENSDARG00000095300 332 0.981 - 0.981 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
100. slc31a2 ENSDARG00000076092 251 0.981 - 0.981 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]

There are 816 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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