Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rp42-pen

Gene Name Gene ID Reads Annotation
rp42-pen rp42-pen 3395










Genes with expression patterns similar to rp42-pen

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rp42-pen rp42-pen 3395 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. zgc:158296 ENSDARG00000070923 3935 5.016 - 0.887 0.807 0.713 - 0.864 0.953 - 0.792 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
3. txlnbb ENSDARG00000076241 6396 4.978 - 0.940 0.703 - 0.829 0.878 0.924 - 0.704 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
4. tnnc1b ENSDARG00000037539 13945 4.824 - 0.929 0.749 0.703 0.716 0.836 0.891 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
5. klhl41b ENSDARG00000006757 10762 4.701 - - 0.753 0.702 0.729 0.814 0.957 - 0.746 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
6. PTPLA PTPLA 4044 4.234 - 0.923 - 0.713 - 0.937 0.949 - 0.712
7. nexn ENSDARG00000057317 10972 4.218 - - 0.768 0.830 - 0.898 0.925 - 0.797 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
8. fitm1 ENSDARG00000056464 1759 4.1 - 0.924 - 0.754 - 0.800 0.871 - 0.751 fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
9. pbxip1a ENSDARG00000071015 4960 4.088 - 0.938 - 0.727 0.745 - 0.930 - 0.748 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
10. mdh1b ENSDARG00000018008 3196 4.084 - 0.741 0.729 - - 0.861 0.943 - 0.810 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
11. zgc:92518 ENSDARG00000016343 3837 4.081 - - 0.702 0.750 0.817 0.867 0.945 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
12. hhatla ENSDARG00000039051 6598 4.068 - 0.931 0.742 0.728 - - 0.944 - 0.723 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
13. MYOM3 2720 4.047 - 0.877 0.707 - 0.785 0.817 0.861 - - myomesin 3, transcript variant X2
14. trdn ENSDARG00000041779 4283 4.028 - 0.871 0.749 - - 0.816 0.871 - 0.721 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
15. cap2 ENSDARG00000104478 3266 4.012 - 0.855 - - 0.713 0.777 0.954 - 0.713 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
16. ITGB1BP2 ENSDARG00000030176 2472 3.977 - 0.875 - - 0.719 0.744 0.866 - 0.773 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
17. tgm2a ENSDARG00000070157 4516 3.916 - - 0.741 - 0.772 0.766 0.909 - 0.728 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
18. tnnt3a ENSDARG00000030270 112506 3.9 - - 0.792 - 0.755 0.762 0.778 - 0.813 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
19. jph2 ENSDARG00000028625 6706 3.896 - - - 0.749 0.732 0.747 0.961 - 0.707 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
20. klhl31 ENSDARG00000039066 13656 3.894 - - 0.779 0.775 0.790 - 0.758 - 0.792 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
21. tmem161a ENSDARG00000012790 16094 3.783 - - 0.781 0.791 0.705 - 0.709 - 0.797 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
22. ntmt1 ENSDARG00000022399 5779 3.53 - 0.980 - - 0.788 0.886 0.876 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
23. chrna1 ENSDARG00000009021 2931 3.519 - 0.957 - 0.799 - 0.860 0.903 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
24. DNAJA4 ENSDARG00000051762 5657 3.515 - 0.893 0.777 - - 0.914 0.931 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
25. smyd2b ENSDARG00000005629 8181 3.492 - 0.929 - - 0.804 0.946 - - 0.813 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
26. myod1 ENSDARG00000030110 6019 3.469 - 0.878 - - - 0.849 0.944 - 0.798 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
27. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.434 - 0.928 - - 0.704 0.915 0.887 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
28. tnnt2d ENSDARG00000002988 7590 3.403 - 0.886 - - - 0.784 0.885 - 0.848 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
29. sptb ENSDARG00000030490 7128 3.365 - 0.926 0.715 - - 0.790 0.934 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
30. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 3.36 - 0.928 0.754 - - 0.841 0.837 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
31. znf106a ENSDARG00000016651 6049 3.334 - 0.900 - - 0.768 - 0.903 - 0.763 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
32. tgm1l1 ENSDARG00000102106 1437 3.306 - 0.958 - 0.701 - 0.850 0.797 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
33. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.296 - - 0.807 - 0.753 - 0.957 - 0.779 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
34. srl ENSDARG00000104587 11126 3.292 - 0.929 - 0.717 0.715 - 0.931 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
35. stac3 ENSDARG00000098883 1765 3.288 - 0.875 0.700 - - 0.840 0.873 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
36. CR847973.1 ENSDARG00000115516 8754 3.28 - 0.844 - - - 0.838 0.862 - 0.736
37. actn3b ENSDARG00000001431 15747 3.268 - 0.924 0.750 0.776 0.818 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
38. alpk3a ENSDARG00000078989 1992 3.267 - 0.901 - - 0.803 0.733 0.830 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
39. trim55a ENSDARG00000029596 2858 3.264 - 0.871 - 0.717 - 0.733 0.943 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
40. txnipb ENSDARG00000070000 2365 3.258 - 0.822 - - - 0.893 0.841 - 0.702 thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
41. xirp2a ENSDARG00000071113 7113 3.247 - 0.867 - 0.750 - 0.714 0.916 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
42. SYNPO2 SYNPO2 7382 3.239 - - 0.822 - 0.782 0.857 - - 0.778
43. mef2aa ENSDARG00000031756 2699 3.238 0.788 0.890 - - - 0.782 0.778 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
44. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 3.238 - - 0.804 0.748 0.816 - 0.870 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
45. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.233 - - - - 0.783 0.851 0.891 - 0.708 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
46. adss ENSDARG00000002071 5497 3.231 - - 0.816 0.765 0.727 - 0.923 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
47. chrne ENSDARG00000034307, ENSDARG00000112263 1022 3.224 - 0.764 - - - 0.854 0.866 - 0.740 cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
48. MYOM1 MYOM1 3870 3.209 - 0.803 0.759 - - - 0.919 - 0.728
49. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.195 - 0.740 - - - 0.858 0.887 - 0.710 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
50. ahsa1 ahsa1 2012 3.18 - - - - 0.711 0.794 0.918 - 0.757
51. jph1b ENSDARG00000038826 7416 3.152 - 0.924 0.725 - 0.788 - 0.715 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
52. sgcd ENSDARG00000098573 4980 3.126 - - 0.705 - 0.757 - 0.945 - 0.719 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
53. C25H12orf73 C25H12orf73 2031 3.103 0.857 0.705 - - - 0.794 0.747 - -
54. sucla2 ENSDARG00000005359 5992 3.098 - 0.838 0.732 - - 0.806 - - 0.722 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
55. tnnt2c ENSDARG00000032242 28801 3.086 - 0.701 - 0.729 0.769 - 0.887 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
56. eno3 ENSDARG00000039007 11355 3.083 - 0.841 - 0.713 0.735 - 0.794 - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
57. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 3.078 0.832 0.763 - - 0.705 - 0.778 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
58. ckmb ENSDARG00000040565 505935 3.064 - - 0.741 0.771 0.782 0.770 - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
59. tpma ENSDARG00000033683 752432 3.052 - - 0.775 0.745 0.748 - 0.784 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
60. mrpl38 ENSDARG00000039667 1145 2.982 0.719 0.836 - - - 0.709 0.718 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
61. atp2a1 ENSDARG00000020574 291561 2.927 - - 0.750 - 0.746 0.716 0.715 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
62. znf648 ENSDARG00000104823 1918 2.686 - 0.900 - - - 0.914 0.872 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
63. trim55b ENSDARG00000058158 586 2.679 0.915 0.938 - - - - 0.826 - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
64. sh3bgr ENSDARG00000021633 3498 2.677 - 0.909 - - - 0.826 0.942 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
65. ryr3 ENSDARG00000071331 6795 2.673 - 0.944 - - - 0.850 0.879 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
66. nmrk2 ENSDARG00000067848 10293 2.668 - 0.940 - - 0.799 - 0.929 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
67. MUSTN1 MUSTN1 1882 2.666 - 0.885 - - - 0.839 0.942 - -
68. cacng1 cacng1 3118 2.653 - 0.922 - - - 0.805 0.926 - -
69. NRAP ENSDARG00000009341 3565 2.634 - 0.885 - - - 0.820 0.929 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
70. CU633479.5 ENSDARG00000114818 1815 2.621 - 0.880 - - - 0.826 0.915 - -
71. myoz2a ENSDARG00000012311 1373 2.614 - 0.847 - - - 0.821 0.946 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
72. klhl40a ENSDARG00000039052 2537 2.613 - 0.903 - - - 0.822 0.888 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
73. asb2a asb2a 845 2.611 - 0.820 - - - 0.888 0.903 - -
74. ryr1b ENSDARG00000023797 5693 2.602 - 0.937 0.748 - - - 0.917 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
75. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.601 - 0.935 - - - - 0.899 - 0.767 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
76. mybphb ENSDARG00000003081 5208 2.6 - 0.969 - - - - 0.877 - 0.754 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
77. TRIM63 TRIM63 1600 2.595 - 0.844 - - - 0.877 0.874 - -
78. BX294434.1 ENSDARG00000061272 6493 2.586 - 0.926 - - - - 0.939 - 0.721 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
79. jph1a ENSDARG00000058603 2852 2.573 - 0.883 - - - 0.782 0.908 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
80. gypc ENSDARG00000041546 1487 2.569 - 0.903 - - - 0.777 0.889 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
81. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.562 - 0.865 - - - 0.877 0.820 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
82. TMPO TMPO 3264 2.56 - 0.897 0.731 - - - 0.932 - -
83. MYOT ENSDARG00000076312 1791 2.558 - 0.902 - - - 0.777 0.879 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
84. cfl2 ENSDARG00000014106 8051 2.557 - 0.946 0.811 - - - 0.800 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
85. tmem182 tmem182 12589 2.554 - - - 0.749 - 0.873 0.932 - -
86. mybpc2b ENSDARG00000021265 9618 2.553 - 0.943 - - - - 0.878 - 0.732 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
87. usp28 ENSDARG00000008880 1850 2.552 - 0.911 - 0.750 - - 0.891 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
88. slc43a1b ENSDARG00000037748 1406 2.549 - 0.867 - - - 0.781 0.901 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
89. prx ENSDARG00000017246 6183 2.546 - 0.886 - - - - 0.920 - 0.740 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
90. EHBP1L1 EHBP1L1 2500 2.544 - 0.899 - - - 0.713 0.932 - -
91. CR392006.1 CR392006.1 1401 2.544 - 0.888 - - - 0.796 0.860 - -
92. smarcd3a ENSDARG00000038786 2894 2.54 - 0.869 - - - 0.825 0.846 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
93. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.538 - 0.933 - 0.701 - - 0.904 - -
94. limch1a ENSDARG00000074275 2981 2.536 - 0.868 - - - 0.731 0.937 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
95. si:ch211-242b18.1 ENSDARG00000054723 2929 2.532 - 0.877 - - - 0.828 0.827 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
96. COL22A1 COL22A1 4473 2.527 - 0.882 0.706 - - - 0.939 - -
97. myhc4 ENSDARG00000035438 1322 2.522 - 0.915 - - - 0.712 0.895 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
98. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 2.522 0.857 - - - - 0.828 0.837 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
99. six1b ENSDARG00000026473 1908 2.518 - 0.889 - - - 0.748 0.881 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
100. pcmt ENSDARG00000015201 5132 2.515 - 0.861 - - - - 0.907 - 0.747 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]

There are 1784 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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