Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rom1b

Gene Name Gene ID Reads Annotation
rom1b ENSDARG00000026926 4 retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]










Genes with expression patterns similar to rom1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rom1b ENSDARG00000026926 4 3 1.000 - 1.000 - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
2. pip5k1cb ENSDARG00000100313 3 2 - - 1.000 - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
3. BX571811.1 ENSDARG00000105621 25 1.653 0.807 - 0.846 - - - - - -
4. RNF207 RNF207 9 1.44 0.738 - - - - - - 0.702 -
5. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
6. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
7. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
8. HCN2 HCN2 0 1 - - 1.000 - - - - - -
9. edar ENSDARG00000099088 1 1 - - 1.000 - - - - - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
10. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - 1.000 - - - - - -
11. zbtb32 ENSDARG00000073726 1 1 - - - - - - - 1.000 - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
12. CABZ01053483.1 CABZ01053483.1 5 1 - - 1.000 - - - - - -
13. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
14. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
15. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
16. CU929521.1 CU929521.1 1 1 - - 1.000 - - - - - -
17. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
18. CABZ01059392.1 ENSDARG00000063108 3 1 - - 1.000 - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
19. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
20. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - - - 1.000 - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
21. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
22. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
23. CU075911.1 CU075911.1 2 1 - - 1.000 - - - - - -
24. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
25. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
26. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
27. BX511270.1 BX511270.1 25 1 1.000 - - - - - - - -
28. zgc:172244 zgc:172244 4 1 - - 1.000 - - - - - -
29. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
30. gzma ENSDARG00000090380, ENSDARG00000112472 0 1 - - - - - - - 1.000 - granzyme A [Source:ZFIN;Acc:ZDB-GENE-091204-156]
31. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
32. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
33. PLEKHA1 PLEKHA1 5 1 - - 1.000 - - - - - -
34. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
35. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
36. BX324198.1 BX324198.1 12 1 - - 1.000 - - - - - -
37. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
38. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
39. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
40. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
41. rock2b_1 ENSDARG00000004877, ENSDARG00000096433 0 1 - - - - - - - 1.000 - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
42. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
43. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
44. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - 1.000 - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
45. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
46. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
47. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
48. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
49. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
50. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
51. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
52. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
53. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
54. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
55. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
56. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
57. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
58. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
59. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
60. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
61. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
62. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
63. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
64. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
65. clec3ba ENSDARG00000076541 3 1 - - - - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
66. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
67. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
68. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
69. slc1a9 ENSDARG00000098269 12 1 - - - - - - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
70. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
71. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
72. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
73. U6_13 U6_13 0 1 - - 1.000 - - - - - -
74. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
75. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
76. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
77. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
78. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
79. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
80. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
81. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
82. spry1 ENSDARG00000103985 0 1 - - 1.000 - - - - - - sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
83. ABCD2_1 ABCD2_1 13 1 - - 1.000 - - - - - -
84. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - 1.000 - - - - - -
85. gprc6a ENSDARG00000005371 7 1 - - 1.000 - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
86. BX649417.1 ENSDARG00000117387 1 1 - - 1.000 - - - - - -
87. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
88. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - 1.000 - - - - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
89. SEC14L5 SEC14L5 1 1 - - 1.000 - - - - - -
90. FP245525.1 FP245525.1 3 1 - - 1.000 - - - - - -
91. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
92. CU856140.1 CU856140.1 4316 1 - - 1.000 - - - - - -
93. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
94. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - 1.000 - - - - - -
95. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
96. GPR32_1 GPR32_1 9 1 - - 1.000 - - - - - -
97. chrm2a ENSDARG00000098612 5 1 - - 1.000 - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
98. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - 1.000 - - - - - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
99. zgc:173711 zgc:173711 2 1 - - 1.000 - - - - - -
100. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]

There are 274 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA