Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rom1b

Gene Name Gene ID Reads Annotation
rom1b ENSDARG00000026926 4 retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]










Genes with expression patterns similar to rom1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rom1b ENSDARG00000026926 4 3 1.000 - 1.000 - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
2. pip5k1cb ENSDARG00000100313 3 2 - - 1.000 - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
3. BX571811.1 ENSDARG00000105621 25 1.653 0.807 - 0.846 - - - - - -
4. RNF207 RNF207 9 1.44 0.738 - - - - - - 0.702 -
5. slc1a9 ENSDARG00000098269 12 1 - - - - - - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
6. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
7. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
8. zgc:101553 zgc:101553 1 1 - - 1.000 - - - - - -
9. FP245525.1 FP245525.1 3 1 - - 1.000 - - - - - -
10. RORC ENSDARG00000087195 9 1 - - 1.000 - - - - - - RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
11. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
12. CABZ01071058.1 CABZ01071058.1 4 1 - - 1.000 - - - - - -
13. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
14. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
15. marco ENSDARG00000059294 17 1 - - 1.000 - - - - - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
16. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
17. PLEKHA1 PLEKHA1 5 1 - - 1.000 - - - - - -
18. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
19. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
20. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
21. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - - - 1.000 - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
22. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
23. AL954746.1 AL954746.1 0 1 - - 1.000 - - - - - -
24. PAK6 PAK6 5 1 - - 1.000 - - - - - -
25. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
26. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
27. rock2b_1 ENSDARG00000004877, ENSDARG00000096433 0 1 - - - - - - - 1.000 - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
28. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - 1.000 - - - - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
29. CABZ01059392.1 ENSDARG00000063108 3 1 - - 1.000 - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
30. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
31. gzma ENSDARG00000090380, ENSDARG00000112472 0 1 - - - - - - - 1.000 - granzyme A [Source:ZFIN;Acc:ZDB-GENE-091204-156]
32. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - 1.000 - - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
33. BX324198.1 BX324198.1 12 1 - - 1.000 - - - - - -
34. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
35. UIMC1 200 1 - - - - - - - 1.000 - ubiquitin interaction motif containing 1
36. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
37. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
38. zgc:112234 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 0 1 - - 1.000 - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
39. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - 1.000 - - - - - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
40. clec3ba ENSDARG00000076541 3 1 - - - - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
41. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
42. si:ch73-223d24.4 si:ch73-223d24.4 5 1 - - 1.000 - - - - - -
43. si:dkey-230i18.1 si:dkey-230i18.1 3 1 - - 1.000 - - - - - -
44. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
45. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
46. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
47. prelp ENSDARG00000070597 99 1 - - 1.000 - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
48. chrm2a ENSDARG00000098612 5 1 - - 1.000 - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
49. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
50. spry1 ENSDARG00000103985 0 1 - - 1.000 - - - - - - sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
51. CABZ01078515.1 CABZ01078515.1 25 1 - - - - - - - 1.000 -
52. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
53. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
54. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
55. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
56. LOXL2 LOXL2 2 1 - - 1.000 - - - - - -
57. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
58. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
59. edar ENSDARG00000099088 1 1 - - 1.000 - - - - - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
60. si:ch211-250c4.5 ENSDARG00000075943 10 1 - - 1.000 - - - - - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
61. U6_13 U6_13 0 1 - - 1.000 - - - - - -
62. CU075911.1 CU075911.1 2 1 - - 1.000 - - - - - -
63. CABZ01053483.1 CABZ01053483.1 5 1 - - 1.000 - - - - - -
64. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
65. BRSK2_2 BRSK2_2 3 1 - - 1.000 - - - - - -
66. CABZ01116714.1 CABZ01116714.1 4 1 - - 1.000 - - - - - -
67. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
68. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
69. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
70. CU856140.1 CU856140.1 4316 1 - - 1.000 - - - - - -
71. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - 1.000 - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
72. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
73. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
74. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1 - - 1.000 - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
75. ABCD2_1 ABCD2_1 13 1 - - 1.000 - - - - - -
76. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
77. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
78. ros1 ENSDARG00000087197 9 1 - - 1.000 - - - - - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
79. zgc:172244 zgc:172244 4 1 - - 1.000 - - - - - -
80. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
81. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
82. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
83. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
84. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
85. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
86. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
87. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
88. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
89. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
90. si:dkey-20i20.3 ENSDARG00000092246 4 1 - - 1.000 - - - - - - si:dkey-20i20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-623]
91. gabrr2a ENSDARG00000052982 21 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
92. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
93. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
94. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
95. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
96. HCN2 HCN2 0 1 - - 1.000 - - - - - -
97. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
98. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
99. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
100. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -

There are 274 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA