Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rom1b

Gene Name Gene ID Reads Annotation
rom1b ENSDARG00000026926 4 retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]










Genes with expression patterns similar to rom1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rom1b ENSDARG00000026926 4 3 1.000 - 1.000 - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
2. pip5k1cb ENSDARG00000100313 3 2 - - 1.000 - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
3. BX571811.1 ENSDARG00000105621 25 1.653 0.807 - 0.846 - - - - - -
4. RNF207 RNF207 9 1.44 0.738 - - - - - - 0.702 -
5. tirap ENSDARG00000074371 10 1 - - - - - - - 1.000 - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
6. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
7. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
8. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
9. BX000477.1 BX000477.1 1 1 - - 1.000 - - - - - -
10. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - 1.000 - - - - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
11. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
12. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
13. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
14. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1 - - 1.000 - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
15. FP245525.1 FP245525.1 3 1 - - 1.000 - - - - - -
16. CABZ01116714.1 CABZ01116714.1 4 1 - - 1.000 - - - - - -
17. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
18. kdr ENSDARG00000017321 31 1 - - 1.000 - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
19. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
20. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
21. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
22. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
23. spry1 ENSDARG00000103985 0 1 - - 1.000 - - - - - - sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
24. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
25. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
26. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
27. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
28. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
29. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
30. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
31. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
32. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
33. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
34. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
35. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
36. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - 1.000 - - - - - -
37. BX005294.3 BX005294.3 0 1 - - 1.000 - - - - - -
38. clec3ba ENSDARG00000076541 3 1 - - - - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
39. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
40. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
41. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
42. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
43. chrm2a ENSDARG00000098612 5 1 - - 1.000 - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
44. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
45. PAK6 PAK6 5 1 - - 1.000 - - - - - -
46. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - 1.000 - - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
47. SEC14L5 SEC14L5 1 1 - - 1.000 - - - - - -
48. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
49. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
50. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
51. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
52. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
53. LOXL2 LOXL2 2 1 - - 1.000 - - - - - -
54. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
55. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
56. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
57. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
58. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
59. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
60. ABCD2_1 ABCD2_1 13 1 - - 1.000 - - - - - -
61. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
62. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
63. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
64. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
65. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
66. zgc:112234 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 0 1 - - 1.000 - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
67. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
68. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
69. GSTK1 ENSDARG00000056510 14 1 - - 1.000 - - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
70. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
71. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
72. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
73. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
74. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
75. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
76. BX511270.1 BX511270.1 25 1 1.000 - - - - - - - -
77. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
78. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
79. HCN2 HCN2 0 1 - - 1.000 - - - - - -
80. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
81. PLCB1 2 1 - - 1.000 - - - - - - phospholipase C beta 1
82. marco ENSDARG00000059294 17 1 - - 1.000 - - - - - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
83. zbtb32 ENSDARG00000073726 1 1 - - - - - - - 1.000 - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
84. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
85. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
86. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
87. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
88. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
89. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
90. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
91. CR936371.2 ENSDARG00000117302 2 1 - - 1.000 - - - - - -
92. si:ch73-223d24.4 si:ch73-223d24.4 5 1 - - 1.000 - - - - - -
93. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
94. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
95. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
96. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
97. ros1 ENSDARG00000087197 9 1 - - 1.000 - - - - - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
98. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
99. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
100. ak5 ENSDARG00000012555 12 1 - - 1.000 - - - - - - adenylate kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8256]

There are 274 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA