Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rom1b

Gene Name Gene ID Reads Annotation
rom1b ENSDARG00000026926 4 retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]










Genes with expression patterns similar to rom1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rom1b ENSDARG00000026926 4 3 1.000 - 1.000 - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
2. pip5k1cb ENSDARG00000100313 3 2 - - 1.000 - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
3. BX571811.1 ENSDARG00000105621 25 1.653 0.807 - 0.846 - - - - - -
4. RNF207 RNF207 9 1.44 0.738 - - - - - - 0.702 -
5. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
6. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
7. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
8. CU929521.1 CU929521.1 1 1 - - 1.000 - - - - - -
9. SH3RF3 ENSDARG00000102334 1 1 - - 1.000 - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
10. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
11. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
12. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
13. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - 1.000 - - - - - -
14. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - 1.000 - - - - - -
15. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
16. BX511270.1 BX511270.1 25 1 1.000 - - - - - - - -
17. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
18. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
19. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
20. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
21. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
22. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
23. BX649417.1 ENSDARG00000117387 1 1 - - 1.000 - - - - - -
24. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
25. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
26. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
27. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
28. zbtb32 ENSDARG00000073726 1 1 - - - - - - - 1.000 - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
29. mki67ip mki67ip 0 1 - - 1.000 - - - - - -
30. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 1 - - 1.000 - - - - - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
31. gprc6a ENSDARG00000005371 7 1 - - 1.000 - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
32. TRAF2 TRAF2 13 1 - - 1.000 - - - - - -
33. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
34. fgf10b ENSDARG00000100475 17 1 - - 1.000 - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
35. s1pr5b ENSDARG00000052192 52 1 - - 1.000 - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
36. tirap ENSDARG00000074371 10 1 - - - - - - - 1.000 - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
37. psmb11 psmb11 5 1 - - - - - - - 1.000 -
38. SEC14L5 SEC14L5 1 1 - - 1.000 - - - - - -
39. ak5 ENSDARG00000012555 12 1 - - 1.000 - - - - - - adenylate kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8256]
40. GSTK1 ENSDARG00000056510 14 1 - - 1.000 - - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
41. ZBED1_4 ZBED1_4 2 1 - - 1.000 - - - - - -
42. 5_8S_rRNA_5 5_8S_rRNA_5 1 1 - - 1.000 - - - - - -
43. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
44. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
45. si:dkey-20i20.3 ENSDARG00000092246 4 1 - - 1.000 - - - - - - si:dkey-20i20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-623]
46. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
47. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
48. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
49. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
50. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
51. HCN2 HCN2 0 1 - - 1.000 - - - - - -
52. PROC PROC 11 1 - - 1.000 - - - - - -
53. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
54. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
55. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - 1.000 - - - - - -
56. gabrr2a ENSDARG00000052982 21 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
57. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
58. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
59. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
60. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
61. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
62. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
63. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
64. si:dkey-199c16.2 si:dkey-199c16.2 0 1 - - 1.000 - - - - - -
65. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
66. BX000477.1 BX000477.1 1 1 - - 1.000 - - - - - -
67. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
68. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
69. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
70. GPR32_1 GPR32_1 9 1 - - 1.000 - - - - - -
71. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
72. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
73. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
74. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
75. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
76. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
77. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
78. kdr ENSDARG00000017321 31 1 - - 1.000 - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
79. BX005294.3 BX005294.3 0 1 - - 1.000 - - - - - -
80. zgc:173711 zgc:173711 2 1 - - 1.000 - - - - - -
81. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
82. PLCB1 2 1 - - 1.000 - - - - - - phospholipase C beta 1
83. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
84. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
85. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
86. CR936371.2 ENSDARG00000117302 2 1 - - 1.000 - - - - - -
87. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
88. CABZ01078515.1 CABZ01078515.1 25 1 - - - - - - - 1.000 -
89. spry1 ENSDARG00000103985 0 1 - - 1.000 - - - - - - sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
90. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
91. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
92. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
93. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
94. prelp ENSDARG00000070597 99 1 - - 1.000 - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
95. chrm2a ENSDARG00000098612 5 1 - - 1.000 - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
96. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
97. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
98. edar ENSDARG00000099088 1 1 - - 1.000 - - - - - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
99. U6_13 U6_13 0 1 - - 1.000 - - - - - -
100. si:ch211-250c4.5 ENSDARG00000075943 10 1 - - 1.000 - - - - - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]

There are 274 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA