Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rom1b

Gene Name Gene ID Reads Annotation
rom1b ENSDARG00000026926 4 retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]










Genes with expression patterns similar to rom1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rom1b ENSDARG00000026926 4 3 1.000 - 1.000 - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
2. pip5k1cb ENSDARG00000100313 3 2 - - 1.000 - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
3. BX571811.1 ENSDARG00000105621 25 1.653 0.807 - 0.846 - - - - - -
4. RNF207 RNF207 9 1.44 0.738 - - - - - - 0.702 -
5. AL954746.1 AL954746.1 0 1 - - 1.000 - - - - - -
6. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - 1.000 - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
7. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - 1.000 - - - - - -
8. gabrr2a ENSDARG00000052982 21 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
9. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
10. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
11. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
12. psmb11 psmb11 5 1 - - - - - - - 1.000 -
13. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
14. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
15. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
16. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
17. rock2b_1 ENSDARG00000004877, ENSDARG00000096433 0 1 - - - - - - - 1.000 - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
18. gprc6a ENSDARG00000005371 7 1 - - 1.000 - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
19. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
20. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - 1.000 - - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
21. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
22. CABZ01059392.1 ENSDARG00000063108 3 1 - - 1.000 - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
23. GPR32_1 GPR32_1 9 1 - - 1.000 - - - - - -
24. SEC14L5 SEC14L5 1 1 - - 1.000 - - - - - -
25. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
26. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
27. ak5 ENSDARG00000012555 12 1 - - 1.000 - - - - - - adenylate kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8256]
28. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
29. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
30. CU856539.4 CU856539.4 0 1 - - 1.000 - - - - - -
31. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
32. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
33. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
34. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
35. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
36. PLCB1 2 1 - - 1.000 - - - - - - phospholipase C beta 1
37. 5_8S_rRNA_5 5_8S_rRNA_5 1 1 - - 1.000 - - - - - -
38. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
39. si:dkey-199c16.2 si:dkey-199c16.2 0 1 - - 1.000 - - - - - -
40. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
41. CU856140.1 CU856140.1 4316 1 - - 1.000 - - - - - -
42. BX324198.1 BX324198.1 12 1 - - 1.000 - - - - - -
43. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
44. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
45. CABZ01053483.1 CABZ01053483.1 5 1 - - 1.000 - - - - - -
46. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
47. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1 - - 1.000 - - - - - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
48. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
49. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
50. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
51. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
52. si:dkey-20i20.3 ENSDARG00000092246 4 1 - - 1.000 - - - - - - si:dkey-20i20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-623]
53. ABCD2_1 ABCD2_1 13 1 - - 1.000 - - - - - -
54. PAK6 PAK6 5 1 - - 1.000 - - - - - -
55. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
56. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - 1.000 - - - - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
57. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
58. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
59. si:ch73-223d24.4 si:ch73-223d24.4 5 1 - - 1.000 - - - - - -
60. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
61. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
62. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
63. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
64. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
65. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
66. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
67. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
68. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
69. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
70. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - 1.000 - - - - - -
71. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
72. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
73. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
74. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
75. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
76. chrm2a ENSDARG00000098612 5 1 - - 1.000 - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
77. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
78. s1pr5b ENSDARG00000052192 52 1 - - 1.000 - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
79. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
80. PROC PROC 11 1 - - 1.000 - - - - - -
81. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
82. CABZ01071058.1 CABZ01071058.1 4 1 - - 1.000 - - - - - -
83. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - 1.000 - - - - - -
84. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
85. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
86. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
87. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
88. clec3ba ENSDARG00000076541 3 1 - - - - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
89. slc1a9 ENSDARG00000098269 12 1 - - - - - - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
90. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
91. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
92. edar ENSDARG00000099088 1 1 - - 1.000 - - - - - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
93. spry1 ENSDARG00000103985 0 1 - - 1.000 - - - - - - sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
94. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
95. gzma ENSDARG00000090380, ENSDARG00000112472 0 1 - - - - - - - 1.000 - granzyme A [Source:ZFIN;Acc:ZDB-GENE-091204-156]
96. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
97. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
98. LOXL2 LOXL2 2 1 - - 1.000 - - - - - -
99. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
100. UIMC1 200 1 - - - - - - - 1.000 - ubiquitin interaction motif containing 1

There are 274 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA