Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rom1a

Gene Name Gene ID Reads Annotation
rom1a ENSDARG00000019752 11 retinal outer segment membrane protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1765]










Genes with expression patterns similar to rom1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rom1a ENSDARG00000019752 11 2 - - - - 1.000 1.000 - - - retinal outer segment membrane protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1765]
2. arnt ENSDARG00000021855, ENSDARG00000115999 32 1 - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
3. FOLR1 FOLR1 25 0.941 - - - - - 0.941 - - -
4. dnah1 ENSDARG00000100115 17 0.906 - - - - - 0.906 - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
5. CU207301.10 CU207301.10 67 0.9 - - - - - 0.900 - - -
6. COL9A1 COL9A1 264 0.896 - - - - - 0.896 - - -
7. MYL4 ENSDARG00000011519 309 0.891 - - - - - 0.891 - - - myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
8. golim4b ENSDARG00000014545 628 0.875 - - - - - 0.875 - - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
9. aqp4 ENSDARG00000010565 624 0.857 - - - - - 0.857 - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
10. syt10 ENSDARG00000045750, ENSDARG00000110484 108 0.856 - - - - - 0.856 - - - synaptotagmin X [Source:ZFIN;Acc:ZDB-GENE-041210-297]
11. gdap1l1 ENSDARG00000028628 233 0.855 - - - - 0.855 - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
12. CU928220.1 CU928220.1 146 0.849 - - - - - 0.849 - - -
13. znf687b ENSDARG00000019299 71 0.843 - - - - 0.843 - - - - zinc finger protein 687b [Source:ZFIN;Acc:ZDB-GENE-041111-214]
14. BX511065.1 BX511065.1 214 0.839 - - - - - 0.839 - - -
15. slc24a3 ENSDARG00000006760 418 0.836 - - - - - 0.836 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-67]
16. CT573393.1 CT573393.1 97 0.834 - - - - - 0.834 - - -
17. plcd4a ENSDARG00000057975 241 0.834 - - - - - 0.834 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
18. aqp8b_1 ENSDARG00000089749 586 0.832 - - - - - 0.832 - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
19. mkxa ENSDARG00000075450, ENSDARG00000114299 233 0.831 - - - - - 0.831 - - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
20. si:dkey-106m10.5 si:dkey-106m10.5 10 0.825 - - - - - 0.825 - - -
21. scara5 ENSDARG00000010425 84 0.812 - - - - - 0.812 - - - scavenger receptor class A, member 5 (putative) [Source:ZFIN;Acc:ZDB-GENE-041210-258]
22. CABZ01026370.1 CABZ01026370.1 286 0.805 - - - - - 0.805 - - -
23. aqp8b ENSDARG00000089749 108 0.804 - - - - - 0.804 - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
24. srrd ENSDARG00000059028 173 0.792 - - - - - 0.792 - - - SRR1 domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-269]
25. lmod2b ENSDARG00000045864 63 0.79 - - - - - 0.790 - - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
26. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 0.787 - - - - - 0.787 - - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
27. snx22 ENSDARG00000053204 148 0.786 - - - - - 0.786 - - - sorting nexin 22 [Source:ZFIN;Acc:ZDB-GENE-060825-154]
28. si:rp71-80o10.4 ENSDARG00000094316 279 0.785 - - - - 0.785 - - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
29. ptgs2b ENSDARG00000010276 692 0.782 - - - - 0.782 - - - - prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
30. CU694315.1 CU694315.1 87 0.78 - - - - 0.780 - - - -
31. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 0.779 - - - - - 0.779 - - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
32. COLGALT2 ENSDARG00000014670 63 0.773 - - - - - 0.773 - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
33. CR318603.2 ENSDARG00000105536 199 0.769 - - - - 0.769 - - - -
34. vegfc ENSDARG00000069640 198 0.767 - - - - - 0.767 - - - vascular endothelial growth factor c [Source:ZFIN;Acc:ZDB-GENE-040303-4]
35. mhc1zca ENSDARG00000069471 21 0.767 - - - - - 0.767 - - - major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
36. gck ENSDARG00000068006 14 0.767 - - - - - 0.767 - - - glucokinase (hexokinase 4) [Source:ZFIN;Acc:ZDB-GENE-060825-204]
37. BX470224.1 ENSDARG00000092793 22 0.765 - - - - - 0.765 - - -
38. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 0.763 - - - - - 0.763 - - - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
39. gdf6b ENSDARG00000005510 106 0.763 - - - - - 0.763 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
40. Metazoa_SRP_13 Metazoa_SRP_13 7 0.763 - - - - - 0.763 - - -
41. irx4a ENSDARG00000035648 71 0.763 - - - - - 0.763 - - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
42. crhb ENSDARG00000027657 9 0.763 - - - - - 0.763 - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
43. DTX4_1 ENSDARG00000076302 31 0.763 - - - - - 0.763 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
44. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 0.763 - - - - - 0.763 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
45. si:ch211-238g23.1 ENSDARG00000055746 23 0.763 - - - - - 0.763 - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
46. apnl ENSDARG00000090900 21 0.763 - - - - - 0.763 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
47. si:ch73-285p12.4 ENSDARG00000054548 1 0.763 - - - - - 0.763 - - - si:ch73-285p12.4 [Source:ZFIN;Acc:ZDB-GENE-110411-145]
48. fam19a1 7 0.763 - - - - - 0.763 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
49. FNDC3B FNDC3B 2 0.763 - - - - - 0.763 - - -
50. pdca ENSDARG00000011886 1 0.763 - - - - - 0.763 - - - phosducin a [Source:ZFIN;Acc:ZDB-GENE-031023-1]
51. trpm3 ENSDARG00000039181 2 0.763 - - - - - 0.763 - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
52. GPR20 ENSDARG00000077427 1 0.763 - - - - - 0.763 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
53. hsd3b1 ENSDARG00000069926 35 0.763 - - - - - 0.763 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
54. fut7 ENSDARG00000044775 25 0.763 - - - - - 0.763 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
55. APOBEC2 APOBEC2 9 0.763 - - - - - 0.763 - - -
56. BX120005.1 ENSDARG00000089327 1 0.763 - - - - - 0.763 - - - cytotoxic and regulatory T-cell molecule [Source:NCBI gene;Acc:101884219]
57. soul5l ENSDARG00000089879 20 0.763 - - - - - 0.763 - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
58. CABZ01061914.2 CABZ01061914.2 2 0.763 - - - - - 0.763 - - -
59. CABZ01049362.1 ENSDARG00000099508 570 0.763 - - - - - 0.763 - - -
60. CU694952.2 CU694952.2 3 0.763 - - - - - 0.763 - - -
61. ZNF70_9 ZNF70_9 1 0.763 - - - - - 0.763 - - -
62. ccdc170 ENSDARG00000016161 18 0.763 - - - - - 0.763 - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
63. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.763 - - - - - 0.763 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
64. EBF3 EBF3 16 0.763 - - - - - 0.763 - - -
65. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 0.763 - - - - - 0.763 - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
66. ctc1 ENSDARG00000070119 8 0.763 - - - - - 0.763 - - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
67. sema4aa ENSDARG00000077103 4 0.763 - - - - - 0.763 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]
68. srd5a3 ENSDARG00000043307 142 0.763 - - - - - 0.763 - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
69. ipp ENSDARG00000075339 3 0.763 - - - - - 0.763 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
70. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 0.763 - - - - - 0.763 - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
71. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 0.763 - - - - - 0.763 - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
72. si:rp71-31c2.1 si:rp71-31c2.1 1 0.763 - - - - - 0.763 - - -
73. si:ch211-209l18.5 si:ch211-209l18.5 1 0.763 - - - - - 0.763 - - -
74. f8 ENSDARG00000101385 1 0.763 - - - - - 0.763 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
75. ADAMTS15_1 ADAMTS15_1 11 0.763 - - - - - 0.763 - - -
76. si:ch211-155d24.7 si:ch211-155d24.7 17 0.763 - - - - - 0.763 - - -
77. si:ch211-117m20.4 ENSDARG00000094286 7 0.763 - - - - - 0.763 - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
78. s1pr5b ENSDARG00000052192 52 0.763 - - - - - 0.763 - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
79. or111-4 ENSDARG00000088846 1 0.763 - - - - - 0.763 - - - odorant receptor, family D, subfamily 111, member 4 [Source:ZFIN;Acc:ZDB-GENE-010308-16]
80. upp2 ENSDARG00000036833 1 0.763 - - - - - 0.763 - - - uridine phosphorylase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-830]
81. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 0.763 - - - - - 0.763 - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
82. kcnq1 ENSDARG00000059798 11 0.763 - - - - - 0.763 - - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
83. ZNF608 3 0.763 - - - - - 0.763 - - - zinc finger protein 608, transcript variant X2
84. CR631122.1 ENSDARG00000044534 8 0.763 - - - - - 0.763 - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
85. SLC22A13 SLC22A13 1 0.763 - - - - - 0.763 - - -
86. rxfp3.2b ENSDARG00000061846, ENSDARG00000109402 1 0.763 - - - - - 0.763 - - - relaxin family peptide receptor 3.2b [Source:ZFIN;Acc:ZDB-GENE-050208-346]
87. CABZ01057928.1 ENSDARG00000115082 1 0.763 - - - - - 0.763 - - - protein diaphanous homolog 1-like [Source:NCBI gene;Acc:101882228]
88. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 0.763 - - - - - 0.763 - - -
89. ccdc78 ENSDARG00000030095 8 0.763 - - - - - 0.763 - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
90. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 0.763 - - - - - 0.763 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
91. si:ch211-196n4.5 si:ch211-196n4.5 63 0.763 - - - - - 0.763 - - -
92. si:dkey-231k6.6 si:dkey-231k6.6 2 0.763 - - - - - 0.763 - - -
93. si:dkey-26g8.11 si:dkey-26g8.11 4 0.763 - - - - - 0.763 - - -
94. casd1 ENSDARG00000023900 12 0.763 - - - - - 0.763 - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
95. BX927349.1 ENSDARG00000097041 1 0.763 - - - - - 0.763 - - - si:dkey-84k15.7 [Source:NCBI gene;Acc:103909075]
96. crfb16 ENSDARG00000075181 40 0.763 - - - - - 0.763 - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
97. foxl2 61 0.763 - - - - - 0.763 - - - forkhead box L2, transcript variant X1
98. cyp27a1.2 ENSDARG00000069186 10 0.763 - - - - - 0.763 - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 2 [Source:ZFIN;Acc:ZDB-GENE-081104-511]
99. prlrb ENSDARG00000045955 12 0.763 - - - - - 0.763 - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
100. GPR78 GPR78 17 0.763 - - - - - 0.763 - - -

There are 78 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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