Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rnpc3

Gene Name Gene ID Reads Annotation
rnpc3 ENSDARG00000011247 778 RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]










Genes with expression patterns similar to rnpc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnpc3 ENSDARG00000011247 778 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA-binding region (RNP1, RRM) containing 3 [Source:ZFIN;Acc:ZDB-GENE-060312-35]
2. HYAL1 ENSDARG00000059916 134 1.632 - 0.771 - - - - 0.861 - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
3. myo1b ENSDARG00000024694 1761 1.6 - 0.829 - 0.771 - - - - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
4. trappc6b ENSDARG00000016463 1343 1.58 - 0.805 - - - 0.775 - - - trafficking protein particle complex 6b [Source:ZFIN;Acc:ZDB-GENE-041010-122]
5. vps37a ENSDARG00000017119, ENSDARG00000110505 772 1.578 - 0.869 - - - - - 0.709 - vacuolar protein sorting 37A [Source:ZFIN;Acc:ZDB-GENE-030131-8312]
6. gng8 ENSDARG00000042970 117 1.566 - 0.819 - - - - - 0.747 - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
7. dpcd ENSDARG00000060501 479 1.556 0.711 - - - - - 0.845 - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-060825-166]
8. CT030204.3 CT030204.3 486 1.55 - 0.837 - - - - - 0.713 -
9. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.545 - - - 0.834 - - 0.711 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
10. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 1.542 0.702 - - - - 0.840 - - - KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
11. vti1b ENSDARG00000039270 295 1.537 - 0.776 - - - - 0.761 - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
12. tmem251 ENSDARG00000042341 1102 1.532 - 0.776 - - - - 0.756 - - transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
13. C17H2orf43 C17H2orf43 379 1.53 - 0.829 - - - 0.701 - - -
14. cables2a ENSDARG00000076964 1330 1.523 - 0.761 - - - 0.762 - - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
15. churc1 ENSDARG00000010831, ENSDARG00000113360 1271 1.52 - 0.759 - 0.761 - - - - - churchill domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-150]
16. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.512 0.742 0.770 - - - - - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
17. fam135a ENSDARG00000059843 2352 1.503 0.768 - - - - - 0.735 - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
18. gadd45g gadd45g 510 1.497 - 0.793 - - - - - - 0.704
19. hyi ENSDARG00000030166 1199 1.485 - 0.729 - - - 0.756 - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
20. map2k5 ENSDARG00000011851 287 1.472 - 0.757 - - - - - - 0.715 mitogen-activated protein kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1517]
21. efnb2b_1 ENSDARG00000074050 1094 1.46 - 0.754 - - - - 0.706 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
22. letm1 ENSDARG00000056978, ENSDARG00000110254 1079 1.411 - 0.703 - - - 0.708 - - - leucine zipper-EF-hand containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-154]
23. kif7 ENSDARG00000033099 971 0.94 - 0.940 - - - - - - - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
24. CABZ01081749.1 CABZ01081749.1 637 0.933 - 0.933 - - - - - - -
25. cdc45 ENSDARG00000043720 353 0.921 - 0.921 - - - - - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
26. foxi3a ENSDARG00000055926 749 0.914 - 0.914 - - - - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
27. ITPR1 ITPR1 161 0.909 - 0.909 - - - - - - -
28. hectd3 ENSDARG00000038905 1170 0.905 - 0.905 - - - - - - - HECT domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-031118-179]
29. nhej1 ENSDARG00000058893 172 0.905 - 0.905 - - - - - - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
30. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 0.904 - - - 0.904 - - - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
31. SLC41A2 SLC41A2 202 0.904 - 0.904 - - - - - - -
32. CR925758.1 CR925758.1 83 0.893 - 0.893 - - - - - - -
33. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.888 - 0.888 - - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
34. TMCC1 TMCC1 463 0.887 - 0.887 - - - - - - -
35. MAL2 ENSDARG00000077637 152 0.885 - 0.885 - - - - - - - mal, T cell differentiation protein 2 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-081022-204]
36. rxrab ENSDARG00000035127 231 0.881 - 0.881 - - - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
37. il13ra1 ENSDARG00000080020 443 0.881 - 0.881 - - - - - - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
38. SPAG5 SPAG5 1117 0.881 - - - 0.881 - - - - -
39. ttpal ENSDARG00000070644, ENSDARG00000112925 471 0.879 - 0.879 - - - - - - - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
40. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 0.879 - 0.879 - - - - - - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
41. dock8 ENSDARG00000055225 312 0.877 - 0.877 - - - - - - - dedicator of cytokinesis 8 [Source:ZFIN;Acc:ZDB-GENE-060503-743]
42. arl5a ENSDARG00000018627, ENSDARG00000117003 588 0.877 - 0.877 - - - - - - - ADP-ribosylation factor-like 5A [Source:ZFIN;Acc:ZDB-GENE-040718-28]
43. rdh8a ENSDARG00000028048 334 0.876 - 0.876 - - - - - - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
44. tm4sf4 ENSDARG00000040747 65 0.872 - 0.872 - - - - - - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
45. usp10 ENSDARG00000103422 4247 0.872 - 0.872 - - - - - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
46. zgc:153952 739 0.872 - 0.872 - - - - - - - zgc:153952, transcript variant X1
47. trit1 ENSDARG00000032876, ENSDARG00000113110 331 0.872 - - - - - 0.872 - - - tRNA isopentenyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-297]
48. bmp7a ENSDARG00000018260 92 0.871 - 0.871 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
49. xrcc4 ENSDARG00000010732 553 0.87 - 0.870 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]
50. si:ch211-214e3.5 ENSDARG00000074270 755 0.87 - 0.870 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
51. si:ch211-222k6.3 ENSDARG00000071578 127 0.87 - 0.870 - - - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
52. bspry ENSDARG00000104875 63 0.869 - - - - - - 0.869 - - B-box and SPRY domain containing [Source:ZFIN;Acc:ZDB-GENE-060526-219]
53. RNF4 ENSDARG00000090993 688 0.869 - 0.869 - - - - - - - ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]
54. tbcd ENSDARG00000098749 128 0.869 - - - - - - 0.869 - - tubulin folding cofactor D [Source:ZFIN;Acc:ZDB-GENE-060823-1]
55. hoga1 ENSDARG00000018944 800 0.868 - 0.868 - - - - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
56. elmod2 ENSDARG00000101669 3101 0.866 - 0.866 - - - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
57. qpctla ENSDARG00000061691 869 0.865 - 0.865 - - - - - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
58. aspscr1 ENSDARG00000105321 595 0.865 - 0.865 - - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
59. fam131a ENSDARG00000077022 445 0.865 - - - - - - 0.865 - - family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112]
60. CABZ01071909.1_1 ENSDARG00000117524 86 0.864 - 0.864 - - - - - - -
61. C11H3orf83 C11H3orf83 30 0.864 - - - - - - 0.864 - -
62. polr1c ENSDARG00000039400 606 0.863 - 0.863 - - - - - - - RNA polymerase I and III subunit C [Source:ZFIN;Acc:ZDB-GENE-040426-1495]
63. si:dkey-14o1.14 si:dkey-14o1.14 142 0.862 - - - 0.862 - - - - -
64. chst10 ENSDARG00000031632 461 0.859 - - - 0.859 - - - - - carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]
65. fas ENSDARG00000043586 194 0.859 - - - - - - 0.859 - - Fas cell surface death receptor [Source:ZFIN;Acc:ZDB-GENE-061019-2]
66. si:dkey-162h11.3 41 0.858 - 0.858 - - - - - - - si:dkey-162h11.3, transcript variant X2
67. cyba ENSDARG00000018283 702 0.858 - 0.858 - - - - - - - cytochrome b-245, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1526]
68. rbm22 ENSDARG00000010238 523 0.858 - 0.858 - - - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
69. dre-mir-222a ENSDARG00000090347 131 0.858 - 0.858 - - - - - - - dre-mir-222a [Source:miRBase;Acc:MI0001388]
70. irf2a ENSDARG00000007387 915 0.857 - 0.857 - - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
71. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.857 - 0.857 - - - - - - - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
72. abcd3a ENSDARG00000104085, ENSDARG00000110888, ENSDARG00000116461 888 0.856 - 0.856 - - - - - - - ATP-binding cassette, sub-family D (ALD), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2868]
73. nudcd3 ENSDARG00000098361 538 0.856 - - - 0.856 - - - - - NudC domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2255]
74. pura pura 1854 0.855 - 0.855 - - - - - - -
75. SLC9A1 ENSDARG00000067784 1494 0.855 - - - - - 0.855 - - - solute carrier family 9 member A1 [Source:HGNC Symbol;Acc:HGNC:11071]
76. mak ENSDARG00000059287 144 0.855 - 0.855 - - - - - - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
77. adora2aa ENSDARG00000033706, ENSDARG00000114856 144 0.855 - 0.855 - - - - - - - adenosine A2a receptor a [Source:ZFIN;Acc:ZDB-GENE-080723-28]
78. CYP27B1 ENSDARG00000045015 119 0.854 - 0.854 - - - - - - - cytochrome P450, family 27, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-111005-2]
79. reep3l reep3l 608 0.853 - 0.853 - - - - - - -
80. zgc:173548 ENSDARG00000070048 558 0.853 - 0.853 - - - - - - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
81. nek2 ENSDARG00000005619 273 0.852 - 0.852 - - - - - - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
82. mapre1a ENSDARG00000042927 164 0.852 - 0.852 - - - - - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
83. tmem88a ENSDARG00000056920 536 0.852 - 0.852 - - - - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
84. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 0.851 - 0.851 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
85. nfkbiz ENSDARG00000102097 218 0.851 - 0.851 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta [Source:ZFIN;Acc:ZDB-GENE-071024-1]
86. ttc19 ENSDARG00000074435 249 0.851 - 0.851 - - - - - - - tetratricopeptide repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-070912-490]
87. ces3 ENSDARG00000041595, ENSDARG00000114555 647 0.85 - 0.850 - - - - - - - carboxylesterase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9563]
88. RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 0.85 - - - - - - 0.850 - - ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]
89. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.849 - 0.849 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
90. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 0.849 - 0.849 - - - - - - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
91. TRIM14_7 TRIM14_7 381 0.849 - 0.849 - - - - - - -
92. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.849 - - - - - - 0.849 - - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
93. btbd10a ENSDARG00000062674 1144 0.848 - 0.848 - - - - - - - BTB (POZ) domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-070410-41]
94. nudt17 ENSDARG00000008014 479 0.847 - 0.847 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
95. dpys ENSDARG00000079543 127 0.846 - - - - - - 0.846 - - dihydropyrimidinase [Source:ZFIN;Acc:ZDB-GENE-070508-1]
96. xrcc5 ENSDARG00000099298 835 0.846 - 0.846 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
97. pemt ENSDARG00000103614 474 0.846 - 0.846 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
98. polr2m ENSDARG00000074968, ENSDARG00000113507 352 0.845 - 0.845 - - - - - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
99. slc6a13l 121 0.844 - 0.844 - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
100. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.843 - 0.843 - - - - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]

There are 766 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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