Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnmtl1a

Gene Name Gene ID Reads Annotation
rnmtl1a 112 RNA methyltransferase like 1a










Genes with expression patterns similar to rnmtl1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnmtl1a 112 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA methyltransferase like 1a
2. nfat5 nfat5 94 1.647 - 0.733 - - - 0.914 - - -
3. bend3 ENSDARG00000076903 320 1.628 0.916 0.712 - - - - - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
4. CU929230.1 ENSDARG00000030665 48 1.596 - 0.769 - - - 0.827 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
5. SUSD3 SUSD3 64 1.59 0.847 - - 0.743 - - - - -
6. ddx46 ENSDARG00000099458 24 1.582 - 0.755 - - - 0.827 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
7. pnpla2 ENSDARG00000089390 129 0.973 - - - - - - 0.973 - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
8. NARS2 ENSDARG00000098441 57 0.966 - - - - - - 0.966 - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
9. NPM2 NPM2 41 0.964 - - - - - - 0.964 - -
10. SDK2 SDK2 145 0.963 - - - - - - 0.963 - -
11. CMKLR1 ENSDARG00000090890 36 0.958 - - - - - - 0.958 - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
12. CABZ01006835.1 CABZ01006835.1 92 0.952 - 0.952 - - - - - - -
13. scin ENSDARG00000010728, ENSDARG00000111092 437 0.948 0.948 - - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
14. hif1aa ENSDARG00000006181 109 0.943 0.943 - - - - - - - - hypoxia inducible factor 1 subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-080917-55]
15. uckl1a ENSDARG00000001686 21 0.941 - - - - - - 0.941 - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
16. fstl3 ENSDARG00000025670 41 0.941 - - - - - - 0.941 - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
17. kcnk13a ENSDARG00000008212 136 0.941 - - - - - - 0.941 - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
18. Mar-03 Mar-03 44 0.941 - - - - - - 0.941 - -
19. hist2h3c_1 ENSDARG00000094154 45 0.941 - - - - - - 0.941 - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
20. rln1 ENSDARG00000103762 8 0.941 - - - - - - 0.941 - - relaxin 1 [Source:ZFIN;Acc:ZDB-GENE-120215-201]
21. slco1c1 ENSDARG00000016749 30 0.941 - - - - - - 0.941 - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
22. AL935186.3 ENSDARG00000109223 19 0.941 - - - - - - 0.941 - -
23. CU467646.1 ENSDARG00000075090 27 0.941 - - - - - - 0.941 - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
24. si:ch73-70k4.1 ENSDARG00000075915 69 0.941 - - - - - - 0.941 - - si:ch73-70k4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3788]
25. si:dkeyp-46h3.3 ENSDARG00000092887 11 0.941 - - - - - - 0.941 - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
26. trpc5a ENSDARG00000070504 5 0.941 - - - - - - 0.941 - - transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1]
27. si:ch211-286b5.9 ENSDARG00000086166 27 0.941 - - - - - - 0.941 - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
28. FBXO4 ENSDARG00000074170 54 0.941 - - - - - - 0.941 - - F-box protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-415]
29. f7i ENSDARG00000075827 4 0.941 - - - - - - 0.941 - - coagulation factor VIIi [Source:ZFIN;Acc:ZDB-GENE-021206-10]
30. pde4cb ENSDARG00000002411 63 0.941 - - - - - - 0.941 - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
31. CABZ01032454.1 CABZ01032454.1 7 0.939 - - - - - 0.939 - - -
32. DNHD1 DNHD1 4 0.939 - - - - - 0.939 - - -
33. sycp1 ENSDARG00000003904 8 0.939 - - - - - 0.939 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
34. plcd1a ENSDARG00000059123 46 0.939 - - - - - - 0.939 - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
35. trim46b ENSDARG00000058649 54 0.939 - - - - - 0.939 - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
36. exosc4 ENSDARG00000103432 21 0.939 - - - - - 0.939 - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
37. CDH7 16 0.939 - - - - - 0.939 - - - cadherin 7, type 2, transcript variant X1
38. qkib ENSDARG00000002026 15 0.939 - - - - - 0.939 - - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
39. si:zfos-979f1.2 ENSDARG00000011652 24 0.939 - - - - - 0.939 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
40. si:ch211-38m6.6 ENSDARG00000076959 12 0.939 - - - - - 0.939 - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
41. MPV17L MPV17L 39 0.939 - - - - - 0.939 - - -
42. map1lc3c ENSDARG00000100528 31 0.939 - - - - - - 0.939 - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
43. si:dkeyp-53d3.5 ENSDARG00000101542 171 0.939 - - - - - 0.939 - - - si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
44. atp1a1a.2 ENSDARG00000007739 121 0.939 - - - - - - 0.939 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]
45. oprm1 ENSDARG00000039434 22 0.939 - - - - - 0.939 - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
46. BX548000.1 ENSDARG00000099044 45 0.939 - - - - - - 0.939 - -
47. si:dkey-192i18.3 si:dkey-192i18.3 47 0.939 - - - - - 0.939 - - -
48. CU184872.1 CU184872.1 15 0.939 - - - - - 0.939 - - -
49. ficd ENSDARG00000035595 129 0.937 - - - - - - 0.937 - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
50. mfsd6b ENSDARG00000054583 239 0.936 - - - - - - 0.936 - - major facilitator superfamily domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040912-84]
51. lhx2b ENSDARG00000031222 517 0.935 - - - - - - 0.935 - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
52. sc:d217 ENSDARG00000079645 32 0.935 - - - - - - 0.935 - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
53. MPZL2 MPZL2 31 0.935 - - - - - - 0.935 - -
54. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 0.934 - - - - - - 0.934 - -
55. CLDN10_1 CLDN10_1 71 0.932 - - - - - - 0.932 - -
56. zfyve26 ENSDARG00000040131 87 0.931 - - - - - - 0.931 - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
57. zgc:101788 zgc:101788 9 0.931 - - - - - - 0.931 - -
58. ssbp3a ENSDARG00000058237 87 0.928 - - - - - - 0.928 - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
59. CABZ01046432.1 ENSDARG00000079325 11 0.927 - - - - - - 0.927 - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
60. bicc1b ENSDARG00000070497 406 0.927 - - - - - - 0.927 - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
61. epd ENSDARG00000103498, ENSDARG00000117020 84 0.926 - - - - - - 0.926 - - ependymin [Source:ZFIN;Acc:ZDB-GENE-980526-111]
62. C5H2orf42 C5H2orf42 65 0.925 - - - - - - 0.925 - -
63. gb:bc139653 gb:bc139653 239 0.925 - - - - - - 0.925 - -
64. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 0.923 - - - - - - 0.923 - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
65. BRD8 ENSDARG00000055999 34 0.922 - - - - - - 0.922 - - bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]
66. plch2a ENSDARG00000059960 222 0.921 - - - - - - 0.921 - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
67. papss2a ENSDARG00000071021, ENSDARG00000110734, ENSDARG00000112597 49 0.921 - - - - - - 0.921 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2a [Source:ZFIN;Acc:ZDB-GENE-061110-85]
68. rbck1 ENSDARG00000031954 95 0.92 - - - - - - 0.920 - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
69. wnt9a ENSDARG00000063437 204 0.919 - - - - - - 0.919 - - wingless-type MMTV integration site family, member 9A [Source:ZFIN;Acc:ZDB-GENE-060825-97]
70. s1pr5b ENSDARG00000052192 52 0.919 - - - - - - 0.919 - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
71. CABZ01102038.1 ENSDARG00000116210 132 0.915 - - - - - - 0.915 - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
72. tlr5b ENSDARG00000052322 86 0.915 - - - - - - 0.915 - - toll-like receptor 5b [Source:ZFIN;Acc:ZDB-GENE-040219-15]
73. glipr1b ENSDARG00000030078 73 0.914 - - - - - 0.914 - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
74. si:ch211-199g17.8 si:ch211-199g17.8 9 0.913 - - - - - - 0.913 - -
75. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 0.912 - - - - - - 0.912 - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
76. si:dkey-56e3.3 ENSDARG00000075194 491 0.911 - - - - - - 0.911 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
77. htatip2 ENSDARG00000028386 245 0.909 0.909 - - - - - - - - HIV-1 Tat interactive protein 2 [Source:ZFIN;Acc:ZDB-GENE-001219-1]
78. utp3 ENSDARG00000056720 922 0.908 - - - - - - 0.908 - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
79. U1_50 U1_50 62 0.908 - - - - - - 0.908 - -
80. slc17a9b ENSDARG00000011049 231 0.908 - - - - - - 0.908 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
81. cbln4 ENSDARG00000061240 67 0.908 - - - - - - 0.908 - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
82. CT956064.4 CT956064.4 541 0.907 - - - - - - 0.907 - -
83. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 0.907 - - - - - - 0.907 - - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
84. CELF3 CELF3 163 0.907 - - - - - 0.907 - - -
85. C8H9orf3 C8H9orf3 414 0.906 - - - - - - 0.906 - -
86. pknox2 ENSDARG00000055349 784 0.905 0.905 - - - - - - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
87. xirp2b ENSDARG00000091090 759 0.903 - 0.903 - - - - - - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
88. chst3a ENSDARG00000061070 127 0.902 - - - - - 0.902 - - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
89. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 0.902 - - - - - - 0.902 - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]
90. tango6 ENSDARG00000034001 203 0.9 - - - - - - 0.900 - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
91. CCDC88A CCDC88A 90 0.9 - 0.900 - - - - - - -
92. sfmbt1 ENSDARG00000044915 892 0.898 - - - - - - 0.898 - - Scm like with four mbt domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2592]
93. znf384l ENSDARG00000001015 137 0.898 - - - - - - 0.898 - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
94. slc15a1a ENSDARG00000100315 23 0.897 - - - - - - 0.897 - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
95. tmeff2b ENSDARG00000058699 82 0.897 0.897 - - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
96. PARP12 PARP12 77 0.893 - - - - - - 0.893 - -
97. ascl1a ENSDARG00000038386 1290 0.892 - - - - - 0.892 - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
98. si:dkey-93m18.3 ENSDARG00000092664 30 0.892 - - - - - - 0.892 - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
99. CU984579.1 ENSDARG00000116863 15 0.887 - - - - - 0.887 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
100. SLC9A3R2 SLC9A3R2 55 0.887 - - - - - - 0.887 - -

There are 619 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA