Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnft2

Gene Name Gene ID Reads Annotation
rnft2 ENSDARG00000053019 270 ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]










Genes with expression patterns similar to rnft2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnft2 ENSDARG00000053019 270 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
2. dpysl5a ENSDARG00000011141 1827 3.007 0.715 0.814 - - - - 0.759 - 0.719 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
3. sv2bb ENSDARG00000060711 196 2.503 0.780 0.913 - - - - 0.810 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
4. cadpsb ENSDARG00000070567 458 2.497 0.803 0.859 - - - - 0.835 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
5. si:ch73-21g5.7 ENSDARG00000093156 9412 2.452 0.735 0.857 - - - - 0.860 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
6. st18 663 2.44 - 0.809 - - - - 0.848 0.783 - suppression of tumorigenicity 18, zinc finger
7. neurod neurod 1189 2.437 0.706 0.905 - - - - 0.826 - -
8. CHL1 CHL1 1553 2.435 0.759 0.872 - - - - 0.804 - -
9. tagln3a ENSDARG00000079805 123 2.425 0.711 0.822 - - - - 0.892 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
10. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.398 0.709 0.822 - - - - 0.867 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
11. cnrip1a ENSDARG00000091683 1491 2.364 - 0.759 - - - - 0.852 0.753 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
12. NTRK3 NTRK3 163 2.356 0.804 0.822 - - - - 0.730 - -
13. myt1b ENSDARG00000102879 5411 2.326 - 0.726 0.700 - - - 0.900 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
14. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.315 - - - - - - 0.842 0.766 0.707 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
15. MCTP1 MCTP1 219 2.312 0.737 0.847 - - - - 0.728 - -
16. rap2ip rap2ip 681 2.284 - 0.738 - - - - 0.835 - 0.711
17. kif1ab ENSDARG00000062024 794 2.282 0.804 0.702 - - - - 0.776 - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
18. mir10d-1 mir10d-1 860 2.269 0.817 0.718 - - - - 0.734 - -
19. SLC5A7 SLC5A7 453 2.253 0.729 0.760 - - - - 0.764 - -
20. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.876 - 0.998 - - - - 0.878 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
21. pkd2l1 ENSDARG00000022503 372 1.876 - 0.935 - - - - 0.941 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
22. zgc:153031 ENSDARG00000068876 73 1.859 - 0.978 - - - 0.881 - - - zgc:153031 [Source:ZFIN;Acc:ZDB-GENE-060929-1190]
23. CABZ01072828.1 CABZ01072828.1 67 1.847 - 0.991 - - - 0.856 - - -
24. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.84 - 0.893 - - - - 0.947 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
25. shhb ENSDARG00000038867 338 1.826 - 0.925 - - - - 0.901 - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
26. foxb1a ENSDARG00000089042 101 1.794 - 0.978 - - - - 0.816 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
27. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.789 0.836 - - - - - 0.953 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
28. her4.3 ENSDARG00000070770 613 1.788 0.970 - - - - - 0.818 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
29. CT573433.2 CT573433.2 115 1.778 0.956 0.822 - - - - - - -
30. syt11a ENSDARG00000057913 1145 1.777 - 0.926 - - - - 0.851 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
31. adam23a ENSDARG00000062323 580 1.769 - 0.928 - - - - 0.841 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
32. nova2 ENSDARG00000017673 7685 1.756 - 0.861 - - - - 0.895 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
33. sox12 ENSDARG00000025847 681 1.75 - 0.822 - - - - 0.928 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
34. st8sia1_1 ENSDARG00000098221 16 1.748 0.926 0.822 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
35. atp2b3b ENSDARG00000023445 1424 1.74 - 0.872 - - - - 0.868 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
36. lrrc4.1 ENSDARG00000069402 323 1.731 - 0.978 - - - - 0.753 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
37. SHC3 ENSDARG00000098909 332 1.728 0.864 - - - - - 0.864 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
38. MAP6 MAP6 643 1.728 - 0.941 - - - - 0.787 - -
39. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.72 0.891 - - - - - 0.829 - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
40. calb1 ENSDARG00000031598 252 1.719 - 0.822 - - - - 0.897 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
41. tmem179 ENSDARG00000013292 343 1.715 - 0.962 - - - - 0.753 - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
42. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.711 - 0.810 - - - - 0.901 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
43. gria2b ENSDARG00000052765 188 1.711 - 0.778 - - - - 0.933 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
44. gng3 ENSDARG00000009553 2530 1.71 - 0.913 - - - - 0.797 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
45. CHRNB4 ENSDARG00000101677 128 1.709 - 0.962 - - - - 0.747 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
46. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.709 - 0.822 - - - - 0.887 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
47. nes ENSDARG00000088805 2710 1.707 - 0.833 - - - - 0.874 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
48. si:dkey-30j22.1 ENSDARG00000042829 25 1.706 - 0.795 - - - 0.911 - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
49. dld ENSDARG00000020219 4928 1.695 0.793 - - - - - 0.902 - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
50. msi1 ENSDARG00000010710 2634 1.694 0.868 - - - - - 0.826 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
51. scn2b ENSDARG00000101713 796 1.69 - 0.921 - - - - 0.769 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
52. zic1 ENSDARG00000015567 2520 1.689 - 0.704 - - - - 0.985 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
53. pcsk1nl ENSDARG00000076170 1232 1.688 - 0.902 - - - - 0.786 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
54. zic4 ENSDARG00000031307 1228 1.688 - 0.838 - - - - 0.850 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
55. sox2 ENSDARG00000070913 2763 1.685 - 0.808 - - - - 0.877 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
56. fzd3a ENSDARG00000021664 1958 1.684 0.800 - - - - - 0.884 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
57. urp2 ENSDARG00000067781 85 1.684 - 0.831 - - - - 0.853 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
58. slc32a1 ENSDARG00000059775 1092 1.682 - 0.965 - - - - 0.717 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
59. KCNAB2 KCNAB2 129 1.681 - 0.822 - - - - 0.859 - -
60. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1.676 - 0.822 - - - 0.854 - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
61. nmnat2 ENSDARG00000004580 370 1.674 - 0.707 - - - - 0.967 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
62. gdap1 ENSDARG00000058601 89 1.673 - - - - - 0.902 0.771 - - ganglioside induced differentiation associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-424]
63. cldn5a ENSDARG00000043716 3865 1.67 0.789 - - - - - 0.881 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
64. atp1b4 ENSDARG00000053262 1337 1.668 - 0.726 - - - - 0.942 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
65. amph ENSDARG00000007663 599 1.662 - 0.921 - - - - 0.741 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
66. snrnp25 ENSDARG00000020363 588 1.662 - 0.734 - - - 0.928 - - - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
67. scn8aa ENSDARG00000005775 792 1.657 - 0.890 - - - - 0.767 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
68. TRMT10A ENSDARG00000036678 621 1.655 - - - - - 0.837 0.818 - - tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
69. gucy1b3 92 1.654 - 0.822 - - - - 0.832 - - guanylate cyclase 1, soluble, beta 3
70. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.654 - 0.844 - - - - 0.810 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
71. nptx1l ENSDARG00000074671 569 1.653 - 0.853 - - - - 0.800 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
72. slc17a6b ENSDARG00000041150 823 1.651 - 0.822 - - - - 0.829 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
73. pou3f2a ENSDARG00000070220 817 1.649 - - - - - - 0.922 0.727 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
74. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.649 0.706 - - - - - 0.943 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
75. gfra3 ENSDARG00000087704 122 1.647 - 0.822 - - - - 0.825 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
76. BX469915.2 BX469915.2 48 1.647 - 0.822 - - - - 0.825 - -
77. mapk12b ENSDARG00000006409 2246 1.646 - 0.808 - - - - 0.838 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
78. si:ch211-202e12.3 401 1.646 - - - - - - 0.899 0.747 - si:ch211-202e12.3, transcript variant X6
79. stx1b ENSDARG00000000503 2724 1.642 - 0.899 - - - - 0.743 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
80. gap43 ENSDARG00000099744 4114 1.641 - 0.817 - - - - 0.824 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
81. lgi1a ENSDARG00000020493 1218 1.64 - 0.768 - - - - 0.872 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
82. NPPC ENSDARG00000068126 45 1.639 - 0.822 - - - - 0.817 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
83. dla ENSDARG00000010791 9281 1.638 0.771 - - - - - 0.867 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
84. jag1a ENSDARG00000030289 1275 1.638 - 0.930 - - - - 0.708 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
85. CABZ01029738.1 CABZ01029738.1 327 1.637 - 0.777 - - - - 0.860 - -
86. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.636 0.790 - - - - - 0.846 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
87. her4.1 ENSDARG00000056732 1264 1.636 - - - - - - 0.850 0.786 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
88. fam219ab ENSDARG00000013813 591 1.633 - 0.822 - - - - 0.811 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
89. C7H4orf48 C7H4orf48 1455 1.633 - - - - - - 0.823 0.810 -
90. epha3l epha3l 1441 1.632 0.748 - - - - - 0.884 - -
91. nrsn1 ENSDARG00000111235 123 1.631 - 0.740 - - - - 0.891 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
92. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.628 - 0.770 - - - - 0.858 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
93. AGO1 ENSDARG00000092644 4521 1.628 0.769 - - - - - 0.859 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
94. GJD2_1 GJD2_1 3045 1.627 - 0.822 - - - - 0.805 - -
95. cacng3b ENSDARG00000076401 91 1.626 - 0.822 - - - - 0.804 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
96. bcr ENSDARG00000079286 578 1.624 0.741 - - - - - 0.883 - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
97. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 1.623 - 0.731 - - - - 0.892 - - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
98. rtn1b ENSDARG00000021143 1682 1.622 - 0.805 - - - - 0.817 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
99. mybl1 ENSDARG00000030999 158 1.62 - 0.822 - - - 0.798 - - - v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
100. ttc9b ENSDARG00000068421 251 1.619 - 0.913 - - - - - 0.706 - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]

There are 1772 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA