Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnft1

Gene Name Gene ID Reads Annotation
rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]










Genes with expression patterns similar to rnft1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
2. ranbp1 ENSDARG00000014817 3371 2.759 - 0.973 - - 0.956 - 0.830 - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
3. phf23a ENSDARG00000030887, ENSDARG00000115791 1918 2.428 - 0.972 - - - 0.751 - 0.705 - PHD finger protein 23a [Source:ZFIN;Acc:ZDB-GENE-050320-67]
4. SVIL SVIL 2589 2.263 - 0.765 - - - - 0.783 0.715 -
5. fzd1 ENSDARG00000106062 1581 1.938 - 0.969 - - 0.969 - - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
6. btr12 ENSDARG00000051809 1804 1.932 - 0.965 - - 0.967 - - - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
7. fbxl5 ENSDARG00000043046 1403 1.927 - 0.982 - - 0.945 - - - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
8. ppp1cc 2361 1.922 - 0.943 - - 0.979 - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
9. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.892 - 0.987 - - 0.905 - - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
10. SENP1 SENP1 1122 1.886 - 0.992 - - - - - 0.894 -
11. chst11 ENSDARG00000034375 2701 1.857 - 0.941 - - 0.916 - - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
12. btbd10b ENSDARG00000020252 7251 1.842 - 0.884 - - 0.958 - - - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
13. gfm2 ENSDARG00000005561 302 1.816 - 0.989 - - - - 0.827 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
14. stat3 ENSDARG00000022712 346 1.799 - 0.984 - - - - - 0.815 - signal transducer and activator of transcription 3 (acute-phase response factor) [Source:ZFIN;Acc:ZDB-GENE-980526-68]
15. ncaph2 ENSDARG00000033757 1042 1.764 - - - - 0.983 - - 0.781 - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
16. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.764 - 0.848 - - 0.916 - - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
17. katna1 ENSDARG00000021827 221 1.758 - 0.990 - - - - 0.768 - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
18. nol8 ENSDARG00000044143 425 1.756 - - - - 0.992 - 0.764 - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
19. prkci ENSDARG00000021225 2472 1.744 - 0.983 - - - 0.761 - - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
20. arhgap29b ENSDARG00000017748 812 1.743 - - - - 0.983 - 0.760 - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
21. mettl16 ENSDARG00000055838 818 1.742 - - - - 0.987 - 0.755 - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
22. bnc2 ENSDARG00000069989 757 1.734 - - - - 0.985 0.749 - - - basonuclin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5784]
23. cdan1 ENSDARG00000042261 658 1.725 - - - - 0.989 - - 0.736 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
24. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 1.721 0.732 - - - 0.989 - - - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
25. pogza ENSDARG00000054778 1495 1.713 - 0.982 - - - - - 0.731 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
26. tmem135 ENSDARG00000069157 918 1.693 - - - - 0.992 - 0.701 - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
27. acacb ENSDARG00000061994 1886 1.691 - - - - 0.978 0.713 - - - acetyl-CoA carboxylase beta [Source:ZFIN;Acc:ZDB-GENE-060526-132]
28. PRRG1 ENSDARG00000043283 2779 1.69 - - - - 0.967 - - 0.723 - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
29. mier1a ENSDARG00000041072 1690 1.687 - - - - 0.958 - - 0.729 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
30. dusp11 ENSDARG00000038156 2490 1.685 - - - - 0.971 - 0.714 - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
31. FBLIM1 ENSDARG00000071558 1793 1.684 - - - - 0.934 - 0.750 - - filamin binding LIM protein 1 [Source:ZFIN;Acc:ZDB-GENE-061013-662]
32. tjp3 ENSDARG00000002909 1978 1.678 - 0.965 - - - - 0.713 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
33. nt5dc2 ENSDARG00000059646 3878 1.652 0.718 - - - 0.934 - - - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
34. sri ENSDARG00000058593 13152 1.645 - 0.869 - - 0.776 - - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
35. znf410 ENSDARG00000008218 1807 1.627 - - - - - - 0.781 0.846 - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
36. swt1 ENSDARG00000094010 472 1.616 - - - - - 0.767 0.849 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
37. arpp19b ENSDARG00000039880 4823 1.609 - 0.786 - - 0.823 - - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
38. rnf41 ENSDARG00000036831, ENSDARG00000111636 872 1.603 - - - - - - 0.896 0.707 - ring finger protein 41 [Source:ZFIN;Acc:ZDB-GENE-040426-2920]
39. ccdc94 1417 1.571 - - - - - - 0.759 0.812 - coiled-coil domain containing 94
40. bag5 ENSDARG00000017316 195 1.564 - - - - - - 0.818 0.746 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
41. sphk2 ENSDARG00000069893 1518 1.562 0.762 - - - - - 0.800 - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
42. WDR48 WDR48 448 1.551 - - - - - - 0.834 0.717 -
43. C5H9orf16 C5H9orf16 743 1.542 - - - - - - 0.799 0.743 -
44. flrt3 ENSDARG00000076895 3516 1.535 - - - - 0.791 - - 0.744 - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
45. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.528 - - - - 0.770 - - 0.758 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
46. rnf13 ENSDARG00000019438 1560 1.524 - - - - - - 0.807 0.717 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
47. dkc1 ENSDARG00000016484 7088 1.503 - 0.753 - - 0.750 - - - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
48. tmx4 ENSDARG00000101512 1379 1.499 - - - - - 0.714 0.785 - - thioredoxin-related transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050706-155]
49. slc25a40 ENSDARG00000015856 359 1.497 - - - - - 0.771 - 0.726 - solute carrier family 25, member 40 [Source:ZFIN;Acc:ZDB-GENE-040718-52]
50. CR352229.2 CR352229.2 784 1.484 - - - - - - 0.758 0.726 -
51. si:dkey-247i3.4 si:dkey-247i3.4 89 1.467 - - - 0.715 - 0.752 - - -
52. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 1.457 - - - - - - 0.720 0.737 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
53. galnt6 ENSDARG00000014386 1126 1.444 - - - - - 0.739 0.705 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
54. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.44 - - - - - 0.711 - 0.729 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
55. exd3 ENSDARG00000063140 119 1.44 - - - - - 0.705 - 0.735 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
56. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 1.435 - - - - - - 0.723 0.712 - tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
57. cyp2ad3 ENSDARG00000022650 672 1.432 0.713 - - - - 0.719 - - - cytochrome P450, family 2, subfamily AD, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-041001-156]
58. FBXW12 FBXW12 658 0.996 - 0.996 - - - - - - -
59. nfe2l2a ENSDARG00000042824 1707 0.996 - 0.996 - - - - - - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
60. ikbkb ENSDARG00000079123 498 0.996 - - - - 0.996 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
61. cnpy1 ENSDARG00000003757 1132 0.995 - - - - 0.995 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
62. gpr161 ENSDARG00000055659 454 0.994 - - - - 0.994 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
63. rybpa ENSDARG00000037773 904 0.994 - - - - 0.994 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
64. arg2 ENSDARG00000039269 571 0.994 - 0.994 - - - - - - - arginase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1334]
65. zgc:173990 zgc:173990 161 0.994 - 0.994 - - - - - - -
66. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.994 - - - - 0.994 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
67. BTBD2 BTBD2 610 0.994 - 0.994 - - - - - - -
68. espn ENSDARG00000076414 343 0.994 - - - - 0.994 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
69. taf1a ENSDARG00000052471 252 0.993 - 0.993 - - - - - - - TATA box binding protein (TBP)-associated factor, RNA polymerase I, A [Source:ZFIN;Acc:ZDB-GENE-041014-272]
70. MGST1 MGST1 1958 0.993 - 0.993 - - - - - - -
71. aatkb ENSDARG00000104442 392 0.993 - - - - 0.993 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
72. Mar-01 Mar-01 176 0.993 - - - - 0.993 - - - -
73. arhgap12a ENSDARG00000008548 757 0.992 - 0.992 - - - - - - - Rho GTPase activating protein 12a [Source:ZFIN;Acc:ZDB-GENE-050809-38]
74. CR933820.2 CR933820.2 152 0.992 - - - - 0.992 - - - -
75. rassf10a 417 0.992 - - - - 0.992 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
76. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.992 - - - - 0.992 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
77. zgc:101663 ENSDARG00000037852 830 0.992 - 0.992 - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
78. pcdh18a ENSDARG00000089805 1096 0.992 - - - - 0.992 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
79. BX548000.3 BX548000.3 241 0.992 - - - - 0.992 - - - -
80. tbx19 ENSDARG00000079187 133 0.992 - - - - 0.992 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
81. her4.3 ENSDARG00000070770 613 0.992 - - - - 0.992 - - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
82. tpcn1 ENSDARG00000062362 563 0.992 - - - - 0.992 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
83. si:ch211-282k23.2 ENSDARG00000093591 447 0.991 - - - - 0.991 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
84. CT583658.1 CT583658.1 561 0.991 - 0.991 - - - - - - -
85. galnt10 ENSDARG00000103825 320 0.991 - 0.991 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
86. ABI3_1 ABI3_1 511 0.991 - 0.991 - - - - - - -
87. C1H3orf70 C1H3orf70 634 0.991 - - - - 0.991 - - - -
88. C8H1orf174 C8H1orf174 372 0.991 - - - - 0.991 - - - -
89. si:dkey-239h2.3 ENSDARG00000092033 398 0.991 - 0.991 - - - - - - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
90. gsto2 ENSDARG00000033285 583 0.991 - - - - 0.991 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
91. wfikkn2a ENSDARG00000013460 859 0.991 - - - - 0.991 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
92. mios ENSDARG00000102587 684 0.991 - 0.991 - - - - - - - missing oocyte, meiosis regulator, homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-856]
93. CHD6 ENSDARG00000017244 219 0.991 - - - - 0.991 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
94. acot13 ENSDARG00000061728, ENSDARG00000114746 516 0.99 - 0.990 - - - - - - - acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
95. zgc:113314 ENSDARG00000069453 833 0.99 - 0.990 - - - - - - - zgc:113314 [Source:ZFIN;Acc:ZDB-GENE-050913-19]
96. snx13 ENSDARG00000013828 684 0.99 - 0.990 - - - - - - - sorting nexin 13 [Source:ZFIN;Acc:ZDB-GENE-050306-12]
97. setd8a 2549 0.99 - - - - 0.990 - - - - SET domain containing (lysine methyltransferase) 8a
98. si:ch211-93g23.2 ENSDARG00000070558 105 0.99 - 0.990 - - - - - - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
99. slc39a13 ENSDARG00000000442 1367 0.99 - - - - 0.990 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
100. slc38a4 ENSDARG00000018149 2344 0.99 - - - - 0.990 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]

There are 1353 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA