Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnf8

Gene Name Gene ID Reads Annotation
rnf8 ENSDARG00000044949 751 ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]










Genes with expression patterns similar to rnf8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf8 ENSDARG00000044949 751 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]
2. cbx1b ENSDARG00000054442 1206 1.589 0.750 - - - - - 0.839 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
3. setd5 ENSDARG00000078576 1974 1.587 - - - - - 0.883 0.704 - - SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
4. ppip5k2 ENSDARG00000078441 1074 1.583 0.749 - - - - - 0.834 - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
5. atp6ap1a ENSDARG00000041417 898 1.566 0.787 - - - - - 0.779 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
6. si:dkey-15h8.15 ENSDARG00000102601 335 1.552 - - - - - 0.847 0.705 - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
7. CABZ01083862.1 ENSDARG00000106989 779 1.544 - - - 0.730 - - 0.814 - - zinc finger protein 821 [Source:NCBI gene;Acc:571740]
8. USP54 USP54 186 1.54 - - - 0.776 - 0.764 - - -
9. dynlt3 ENSDARG00000046132 1054 1.526 - 0.723 - - - - 0.803 - - dynein, light chain, Tctex-type 3 [Source:ZFIN;Acc:ZDB-GENE-040927-24]
10. syngr1a ENSDARG00000002564 209 1.521 0.792 - - - - - 0.729 - - synaptogyrin 1a [Source:ZFIN;Acc:ZDB-GENE-041010-169]
11. med4 ENSDARG00000041503 395 1.52 - 0.702 - - - - 0.818 - - mediator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-438]
12. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.517 - 0.760 - - - 0.757 - - - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
13. trappc3 ENSDARG00000045364 1021 1.511 - 0.726 - - - 0.785 - - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
14. dhx57 ENSDARG00000057660 390 1.507 - - - - - 0.703 0.804 - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:ZFIN;Acc:ZDB-GENE-030131-4078]
15. specc1lb ENSDARG00000042232 640 1.499 - - - - - 0.758 0.741 - - sperm antigen with calponin homology and coiled-coil domains 1-like b [Source:ZFIN;Acc:ZDB-GENE-090423-1]
16. C16H8orf76 C16H8orf76 329 1.495 - - - 0.739 - 0.756 - - -
17. znf668 ENSDARG00000025226, ENSDARG00000112533 177 1.494 - - - - - 0.762 0.732 - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
18. ncalda ENSDARG00000070688 5069 1.484 - 0.760 - - - - 0.724 - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
19. hn1b hn1b 7325 1.469 - 0.724 - - - - 0.745 - -
20. RSF1 RSF1 1242 1.468 - 0.735 - - - - 0.733 - -
21. ftsjd1 ftsjd1 137 1.459 - - - - - 0.713 0.746 - -
22. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 1.449 - - - - - 0.742 0.707 - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
23. rasl10a ENSDARG00000062314 207 1.44 - - - 0.707 - 0.733 - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
24. adam17b ENSDARG00000093093 792 1.439 - 0.714 - - - 0.725 - - - ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
25. polr3glb ENSDARG00000013734 1199 1.437 - 0.724 - - - - 0.713 - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
26. zgc:92907 ENSDARG00000011026 986 1.435 - - - - - 0.702 0.733 - - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
27. zgc:193742 ENSDARG00000092387, ENSDARG00000115140, ENSDARG00000116906 653 1.421 - - - 0.714 - - 0.707 - - zgc:193742 [Source:ZFIN;Acc:ZDB-GENE-081022-37]
28. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.421 - - - - - 0.707 0.714 - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
29. HHLA2_1 HHLA2_1 456 0.897 - 0.897 - - - - - - -
30. timeless ENSDARG00000078497 1114 0.895 - - - - - 0.895 - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
31. anxa4 ENSDARG00000036456 3332 0.893 - 0.893 - - - - - - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
32. si:ch211-79l20.4 1305 0.893 - - - - - - 0.893 - - si:ch211-79l20.4, transcript variant X3
33. zgc:162200 ENSDARG00000079934 1225 0.89 - - - - - 0.890 - - - zgc:162200 [Source:ZFIN;Acc:ZDB-GENE-030131-2989]
34. apc ENSDARG00000058868 2605 0.885 - - - - - - 0.885 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
35. itm2ba ENSDARG00000007098 5686 0.883 - 0.883 - - - - - - - integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
36. sh3bp4a ENSDARG00000020000 1049 0.88 - - - - - 0.880 - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
37. mapk3 ENSDARG00000070573 6842 0.873 - 0.873 - - - - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
38. amer2 ENSDARG00000075222 594 0.87 - - - - - - 0.870 - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
39. rab14 ENSDARG00000074246 4084 0.866 - - - - - 0.866 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
40. FAM171A2 FAM171A2 707 0.864 0.864 - - - - - - - -
41. CHL1 CHL1 1553 0.861 0.861 - - - - - - - -
42. mlec ENSDARG00000059630 2057 0.861 - 0.861 - - - - - - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
43. C9H21orf33 C9H21orf33 321 0.859 - - - - - 0.859 - - -
44. CABZ01003022.1 CABZ01003022.1 507 0.857 - - - - - - 0.857 - -
45. phactr4a ENSDARG00000015552 1315 0.855 - 0.855 - - - - - - - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
46. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 0.854 - - - 0.854 - - - - - ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
47. commd4 ENSDARG00000061946 3281 0.853 - - - - - 0.853 - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
48. st3gal5 ENSDARG00000037556, ENSDARG00000109884 662 0.853 - - - - - - 0.853 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-1]
49. rab6ba ENSDARG00000034522 495 0.851 - - - - - - 0.851 - - RAB6B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-136]
50. rfc3 ENSDARG00000055969, ENSDARG00000112402 1448 0.85 - - - - - 0.850 - - - replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]
51. ubr3 ENSDARG00000042508 738 0.849 - - - - - 0.849 - - - ubiquitin protein ligase E3 component n-recognin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1473]
52. mafb ENSDARG00000076520 139 0.849 0.849 - - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
53. pih1d1 ENSDARG00000037955 301 0.847 - - - - - - 0.847 - - PIH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-147]
54. psen1 ENSDARG00000004870 1590 0.847 - - - - - 0.847 - - - presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
55. cth ENSDARG00000074301 3860 0.847 - - - - - 0.847 - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
56. cog4 ENSDARG00000054264 785 0.846 - - - 0.846 - - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
57. prelid1b ENSDARG00000044169 501 0.845 - - - - - - 0.845 - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
58. pcdh19 ENSDARG00000034344 2378 0.845 - 0.845 - - - - - - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
59. tdrkh ENSDARG00000053474, ENSDARG00000115911 277 0.844 - - - - - - 0.844 - - tudor and KH domain containing [Source:ZFIN;Acc:ZDB-GENE-050327-81]
60. pitpnb ENSDARG00000036005 513 0.844 - - - - - 0.844 - - - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
61. exoc7 ENSDARG00000087229 987 0.843 - - - - - 0.843 - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
62. aktip ENSDARG00000026862, ENSDARG00000115058 2775 0.843 - - - - - 0.843 - - - akt interacting protein [Source:ZFIN;Acc:ZDB-GENE-030909-5]
63. magoh ENSDARG00000038635, ENSDARG00000109837 2880 0.843 - - - - - 0.843 - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
64. azin1a ENSDARG00000052789 387 0.843 - - - - - 0.843 - - - antizyme inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050417-20]
65. RANBP2 ENSDARG00000093125 1854 0.842 - 0.842 - - - - - - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
66. ly75 ENSDARG00000053113 196 0.841 - - - - - - 0.841 - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
67. dmbx1b ENSDARG00000002510 351 0.838 - - - - - - 0.838 - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
68. dpy19l1l ENSDARG00000069995 584 0.838 - - - - - - 0.838 - - dpy-19-like 1, like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030521-11]
69. dlg4 88 0.837 0.837 - - - - - - - - discs large MAGUK scaffold protein 4, transcript variant X5
70. FRMD4B FRMD4B 359 0.836 - - - - - - 0.836 - -
71. CABZ01067945.1 CABZ01067945.1 469 0.835 - 0.835 - - - - - - -
72. srek1ip1 ENSDARG00000043728 985 0.834 - - - - - - 0.834 - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
73. GK2 GK2 813 0.834 - 0.834 - - - - - - -
74. syt8 syt8 82 0.833 - - - - - 0.833 - - -
75. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 0.833 0.833 - - - - - - - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
76. acaca ENSDARG00000078512, ENSDARG00000114071 386 0.833 - 0.833 - - - - - - - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
77. hoxb3a ENSDARG00000029263 5493 0.832 - 0.832 - - - - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
78. pex3 ENSDARG00000013973 312 0.832 - - - - - 0.832 - - - peroxisomal biogenesis factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-979]
79. APOLD1_1 APOLD1_1 590 0.831 - - - - - 0.831 - - -
80. NPPC ENSDARG00000068126 45 0.831 0.831 - - - - - - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
81. chchd7 ENSDARG00000068156 317 0.831 - - - - - - 0.831 - - coiled-coil-helix-coiled-coil-helix domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-080204-55]
82. RNF157 ENSDARG00000057481 215 0.831 - - - - - - 0.831 - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
83. agpat6 agpat6 587 0.83 0.830 - - - - - - - -
84. tcea2 ENSDARG00000012927 440 0.829 0.829 - - - - - - - - transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
85. eya2 ENSDARG00000018984 1768 0.829 - - - - - 0.829 - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
86. gfra2a ENSDARG00000042723 592 0.828 - 0.828 - - - - - - - GDNF family receptor alpha 2a [Source:ZFIN;Acc:ZDB-GENE-040630-1]
87. SIRT5 ENSDARG00000039684 1124 0.828 - - - 0.828 - - - - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
88. sfi1 ENSDARG00000053992 1075 0.828 - - - - - 0.828 - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
89. kazald2 ENSDARG00000078518 3062 0.827 - - - - - 0.827 - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
90. CABZ01115322.1 CABZ01115322.1 1283 0.826 - 0.826 - - - - - - -
91. CABZ01115256.1 CABZ01115256.1 683 0.826 - - - - - 0.826 - - -
92. bcl7ba ENSDARG00000111877 3696 0.826 - - - - - - 0.826 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
93. ngf ngf 278 0.825 - - - - - - 0.825 - -
94. C3H16orf72 C3H16orf72 2059 0.824 - - - - - 0.824 - - -
95. C20H12orf57 C20H12orf57 3325 0.824 - - - - - 0.824 - - -
96. ppm1nb ENSDARG00000057032 77 0.823 0.823 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative) [Source:ZFIN;Acc:ZDB-GENE-071004-34]
97. KAZN KAZN 58 0.822 - - - - - 0.822 - - -
98. E2F1 ENSDARG00000103868 638 0.821 0.821 - - - - - - - - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
99. ago3b ENSDARG00000063079 1441 0.82 - 0.820 - - - - - - - argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
100. si:ch73-299h12.6 ENSDARG00000101319 373 0.819 - - - - - - 0.819 - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]

There are 898 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA