Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnf6

Gene Name Gene ID Reads Annotation
rnf6 ENSDARG00000077955 442 ring finger protein (C3H2C3 type) 6 [Source:ZFIN;Acc:ZDB-GENE-100209-1]










Genes with expression patterns similar to rnf6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf6 ENSDARG00000077955 442 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein (C3H2C3 type) 6 [Source:ZFIN;Acc:ZDB-GENE-100209-1]
2. TOR4A TOR4A 70 1.669 - - - 0.828 - 0.841 - - -
3. znf277 ENSDARG00000025346, ENSDARG00000113592 288 1.565 - - - 0.794 - 0.771 - - - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
4. SBNO2 SBNO2 773 1.552 - - - - - 0.765 0.787 - -
5. cdc16 ENSDARG00000055470, ENSDARG00000111307 347 1.548 - - - 0.738 - - 0.810 - - cell division cycle 16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051113-132]
6. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.532 - - - 0.816 - - 0.716 - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
7. clip1a ENSDARG00000078722 677 1.491 0.768 - - - - - 0.723 - - CAP-GLY domain containing linker protein 1a [Source:ZFIN;Acc:ZDB-GENE-060526-282]
8. tubgcp4 ENSDARG00000005374 208 1.485 - 0.701 - 0.784 - - - - - tubulin, gamma complex associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-081022-124]
9. ube2j2 ENSDARG00000061161 844 1.482 - - - 0.702 - - 0.780 - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
10. pld1b ENSDARG00000057125 325 1.478 0.769 - - 0.709 - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
11. mapre1a ENSDARG00000042927 164 0.924 - - - - - - 0.924 - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
12. tek ENSDARG00000028663 167 0.913 - - - 0.913 - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
13. lrrc42 ENSDARG00000030591 156 0.905 - - - 0.905 - - - - - leucine rich repeat containing 42 [Source:ZFIN;Acc:ZDB-GENE-030131-4992]
14. grna ENSDARG00000004954 189 0.905 - - - - - - 0.905 - - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
15. camk4 ENSDARG00000005372 118 0.903 - - - - - 0.903 - - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
16. dnm1b ENSDARG00000009281 219 0.897 - - - 0.897 - - - - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
17. ZNF76 ENSDARG00000013279 260 0.894 - - - 0.894 - - - - - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
18. slc43a3b ENSDARG00000057949 194 0.891 - - - - - - 0.891 - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
19. rbm5 ENSDARG00000098280 396 0.89 - 0.890 - - - - - - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
20. C21H18orf54 C21H18orf54 174 0.888 - - - 0.888 - - - - -
21. GALNT3 ENSDARG00000108649 356 0.881 - - - 0.881 - - - - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
22. zgc:153704 ENSDARG00000045979 11 0.874 - - - - - - 0.874 - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
23. tmem56a ENSDARG00000098451 776 0.872 - - - 0.872 - - - - - transmembrane protein 56a [Source:ZFIN;Acc:ZDB-GENE-090402-1]
24. hoxa13b ENSDARG00000036254 404 0.87 - - - - - - 0.870 - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
25. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 0.868 - - - 0.868 - - - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
26. BX294190.1 BX294190.1 17 0.865 - - - - - - 0.865 - -
27. CABZ01039301.1 CABZ01039301.1 189 0.865 - - - 0.865 - - - - -
28. kcnh6 kcnh6 59 0.864 - - - 0.864 - - - - -
29. gng13b ENSDARG00000037921 215 0.863 - - - 0.863 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
30. dkk1a ENSDARG00000014103 71 0.863 - - - - - 0.863 - - - dickkopf WNT signaling pathway inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-090313-406]
31. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 0.863 - - - 0.863 - - - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
32. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.862 - - - 0.862 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
33. ZFAT ENSDARG00000077987 205 0.862 - - - 0.862 - - - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
34. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.861 - - - - - - 0.861 - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
35. dlec1 ENSDARG00000075825 60 0.861 - - - 0.861 - - - - - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
36. capn7 ENSDARG00000102987 386 0.861 - - - 0.861 - - - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
37. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.859 - - - 0.859 - - - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
38. fut11 ENSDARG00000102402 56 0.859 - - - 0.859 - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
39. sik2a ENSDARG00000079618, ENSDARG00000115529 65 0.859 - - - 0.859 - - - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
40. mamdc2b ENSDARG00000073695 26 0.859 - - - 0.859 - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
41. CT025914.2 CT025914.2 53 0.858 - - - 0.858 - - - - -
42. extl2 ENSDARG00000063191 118 0.858 - - - 0.858 - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
43. gga3 ENSDARG00000103667 675 0.857 - - - - - - 0.857 - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
44. agpat3 ENSDARG00000036549 1093 0.855 - - - - - - 0.855 - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
45. fam20c fam20c 603 0.855 - - - - - 0.855 - - -
46. asic1b ENSDARG00000101866 61 0.855 - - - 0.855 - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
47. CNST CNST 540 0.855 - - - 0.855 - - - - -
48. traf6 ENSDARG00000028058 478 0.855 - - - 0.855 - - - - - TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]
49. nif3l1 ENSDARG00000045249 28 0.855 - - - 0.855 - - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
50. trim35-28 ENSDARG00000021021 1380 0.854 - - - 0.854 - - - - - tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
51. CABZ01086354.1_1 CABZ01086354.1_1 89 0.853 - - - 0.853 - - - - -
52. pigu ENSDARG00000075530 348 0.853 - - - 0.853 - - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
53. slc52a2 ENSDARG00000102035 57 0.853 - - - 0.853 - - - - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
54. cacnb2b ENSDARG00000055565 20 0.851 - - - - - - 0.851 - - calcium channel, voltage-dependent, beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-129]
55. scamp1 ENSDARG00000036911 103 0.851 - - - 0.851 - - - - - secretory carrier membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1803]
56. egfl6 ENSDARG00000045958 335 0.85 - - - 0.850 - - - - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
57. smim12 ENSDARG00000070358 895 0.85 0.850 - - - - - - - - small integral membrane protein 12 [Source:ZFIN;Acc:ZDB-GENE-050320-101]
58. cog5 ENSDARG00000008235 222 0.849 - - - - - 0.849 - - - component of oligomeric golgi complex 5 [Source:ZFIN;Acc:ZDB-GENE-041210-47]
59. csde1 ENSDARG00000074758 172 0.849 - - - 0.849 - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
60. si:ch211-274p24.5 si:ch211-274p24.5 122 0.848 - - - 0.848 - - - - -
61. si:ch211-250m6.8 si:ch211-250m6.8 51 0.847 - - - 0.847 - - - - -
62. tecra ENSDARG00000101585 609 0.847 - - - 0.847 - - - - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
63. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.847 - - - 0.847 - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
64. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 0.846 - - - 0.846 - - - - - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
65. ftr14 ENSDARG00000053293 77 0.846 - - - - - 0.846 - - - finTRIM family, member 14 [Source:ZFIN;Acc:ZDB-GENE-060512-201]
66. kcnf1a ENSDARG00000027940 155 0.846 - - - 0.846 - - - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
67. adora1 adora1 149 0.845 - - - 0.845 - - - - -
68. arhgap29b ENSDARG00000017748 812 0.845 - - - - - - 0.845 - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
69. lmx1a ENSDARG00000020354 111 0.845 - - - 0.845 - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
70. hk2 ENSDARG00000101482, ENSDARG00000116757 92 0.845 - - - 0.845 - - - - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
71. zgc:112038 ENSDARG00000046140 73 0.843 - - - - - - 0.843 - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
72. slc52a3 ENSDARG00000042737 67 0.843 - - - 0.843 - - - - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
73. CU207301.10 CU207301.10 67 0.842 - - - 0.842 - - - - -
74. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.841 - - - - - - 0.841 - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
75. si:ch211-171h4.7 ENSDARG00000088408 168 0.841 - - - - - 0.841 - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
76. CASS4 ENSDARG00000006775 760 0.84 - - - 0.840 - - - - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
77. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 0.839 - - - 0.839 - - - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
78. CABZ01075275.1 CABZ01075275.1 124 0.838 - - - - - 0.838 - - -
79. si:dkey-56m15.5 ENSDARG00000103420 229 0.838 - - - 0.838 - - - - - si:dkey-56m15.5 [Source:ZFIN;Acc:ZDB-GENE-110913-134]
80. slc15a4 ENSDARG00000102612 1096 0.838 - - - - - 0.838 - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
81. heca ENSDARG00000042877 200 0.838 - - - 0.838 - - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
82. si:ch73-211l2.1 605 0.837 - - - - - - 0.837 - - si:ch73-211l2.1
83. si:ch211-271g18.2 si:ch211-271g18.2 34 0.836 - - - - - 0.836 - - -
84. vkorc1l1 ENSDARG00000043644 548 0.836 - - - - - 0.836 - - - vitamin K epoxide reductase complex, subunit 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-210]
85. ddhd2 ENSDARG00000076765 29 0.835 - - - - - - 0.835 - - DDHD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080519-4]
86. JTB ENSDARG00000070150 135 0.835 - - - 0.835 - - - - - jumping translocation breakpoint [Source:ZFIN;Acc:ZDB-GENE-060503-674]
87. TRIM65 ENSDARG00000077098 991 0.833 - - - 0.833 - - - - - tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
88. plek2 ENSDARG00000012789 102 0.832 - - - - - - 0.832 - - pleckstrin 2 [Source:ZFIN;Acc:ZDB-GENE-080219-2]
89. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.832 - - - 0.832 - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
90. BX640537.1 ENSDARG00000099408 192 0.83 - - - 0.830 - - - - -
91. SAYSD1 SAYSD1 149 0.829 - - - 0.829 - - - - -
92. si:ch211-136m16.8 ENSDARG00000090767 91 0.829 - - - 0.829 - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
93. arhgap25 ENSDARG00000061784 112 0.828 - - - - - - 0.828 - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
94. abcd3b ENSDARG00000002947 220 0.828 - - - - - - 0.828 - - ATP-binding cassette, sub-family D (ALD), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-29]
95. tmem88a ENSDARG00000056920 536 0.827 - - - 0.827 - - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
96. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.827 0.827 - - - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
97. asb4 ENSDARG00000034988 1115 0.826 - - - 0.826 - - - - - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
98. chordc1 chordc1 548 0.826 - - - - - - 0.826 - -
99. gal3st1 gal3st1 108 0.826 - - - 0.826 - - - - -
100. CAMKK2 CAMKK2 184 0.826 - - - 0.826 - - - - -

There are 564 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA