Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnf25

Gene Name Gene ID Reads Annotation
rnf25 ENSDARG00000027182, ENSDARG00000109462, ENSDARG00000114859 246 ring finger protein 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1581]










Genes with expression patterns similar to rnf25

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf25 ENSDARG00000027182, ENSDARG00000109462, ENSDARG00000114859 246 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1581]
2. si:dkey-10f21.16 si:dkey-10f21.16 252 1.592 - 0.833 - - - - 0.759 - -
3. fgd 377 1.585 - 0.883 - - - - 0.702 - - faciogenital dysplasia
4. tsga10 ENSDARG00000052512 79 1.577 - - - - 0.778 - 0.799 - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
5. EXD1 ENSDARG00000098669 27 1.576 - 0.817 - - - - 0.759 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
6. ikbkb ENSDARG00000079123 498 1.56 0.776 - 0.784 - - - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
7. pih1d2 ENSDARG00000014849 389 1.536 - 0.804 - - - - 0.732 - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
8. HDX ENSDARG00000079382 513 1.529 - 0.804 - - - - 0.725 - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
9. BX465841.1 BX465841.1 47 1.52 - - - - 0.760 - 0.760 - -
10. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.515 - 0.743 0.772 - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
11. si:dkey-167i21.2 ENSDARG00000093886 10 1.504 - - - - 0.745 - 0.759 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
12. CCDC89 CCDC89 40 1.491 - - - - 0.759 - 0.732 - -
13. wbscr27 wbscr27 70 1.486 - - 0.727 - - - 0.759 - -
14. myt1la ENSDARG00000008209 120 1.425 - - - - 0.703 - 0.722 - - myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
15. lrp2a ENSDARG00000102506 212 0.976 - 0.976 - - - - - - - low density lipoprotein receptor-related protein 2a [Source:ZFIN;Acc:ZDB-GENE-050119-2]
16. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 0.955 - 0.955 - - - - - - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
17. gch2 ENSDARG00000099101 45623 0.952 - 0.952 - - - - - - - GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
18. slc35g2b ENSDARG00000045447 378 0.943 - 0.943 - - - - - - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
19. SLC3A2_1 SLC3A2_1 358 0.937 - 0.937 - - - - - - -
20. sox19b ENSDARG00000040266 532 0.937 - 0.937 - - - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
21. trpv6 ENSDARG00000014496, ENSDARG00000110671 128 0.937 - 0.937 - - - - - - - transient receptor potential cation channel, subfamily V, member 6 [Source:ZFIN;Acc:ZDB-GENE-040624-12]
22. CABZ01029738.1 CABZ01029738.1 327 0.936 - 0.936 - - - - - - -
23. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 0.931 - 0.931 - - - - - - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
24. pax6a ENSDARG00000103379 3061 0.93 - 0.930 - - - - - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
25. mb21d2a mb21d2a 421 0.928 - 0.928 - - - - - - -
26. nes ENSDARG00000088805 2710 0.921 - 0.921 - - - - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
27. her15.2 her15.2 1701 0.92 - 0.920 - - - - - - -
28. itm2ca ENSDARG00000043448 1265 0.919 - 0.919 - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
29. zgc:163143 ENSDARG00000076437 166 0.916 - 0.916 - - - - - - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
30. CU928222.1 ENSDARG00000097436 1662 0.911 - 0.911 - - - - - - -
31. mcm3_1 ENSDARG00000024204 467 0.91 - 0.910 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
32. FAM171A2 FAM171A2 707 0.908 - 0.908 - - - - - - -
33. pigv ENSDARG00000101952 173 0.908 - 0.908 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]
34. zgc:173702 ENSDARG00000110229 411 0.908 - 0.908 - - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
35. st18 663 0.908 - 0.908 - - - - - - - suppression of tumorigenicity 18, zinc finger
36. si:dkey-164n2.1 47 0.908 - 0.908 - - - - - - - si:dkey-164n2.1, transcript variant X1
37. CABZ01080370.1 CABZ01080370.1 58 0.906 - - - - - - 0.906 - -
38. sox2 ENSDARG00000070913 2763 0.905 - 0.905 - - - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
39. cldn15la ENSDARG00000016081 197 0.905 - 0.905 - - - - - - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
40. mir10d-1 mir10d-1 860 0.898 - 0.898 - - - - - - -
41. dlg2 ENSDARG00000099323 162 0.895 - 0.895 - - - - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
42. dbx1a ENSDARG00000086393 3161 0.895 - 0.895 - - - - - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
43. slc22a7a ENSDARG00000056028 2426 0.895 - 0.895 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
44. nlgn3a ENSDARG00000104786 91 0.893 - 0.893 - - - - - - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
45. fsd1 ENSDARG00000062017 207 0.891 - 0.891 - - - - - - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
46. tyrp1b ENSDARG00000056151 3803 0.89 - 0.890 - - - - - - - tyrosinase-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-249]
47. cax1 ENSDARG00000045601 366 0.889 - 0.889 - - - - - - - cation/H+ exchanger protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3044]
48. CABZ01079764.1 CABZ01079764.1 12103 0.889 - 0.889 - - - - - - -
49. MAP1A MAP1A 847 0.889 - 0.889 - - - - - - -
50. ROBO3_1 ROBO3_1 468 0.887 - 0.887 - - - - - - -
51. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 0.887 - 0.887 - - - - - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
52. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 0.885 - 0.885 - - - - - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
53. NAV2 NAV2 538 0.885 - - - - - - 0.885 - -
54. ascl1a ENSDARG00000038386 1290 0.885 - 0.885 - - - - - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
55. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 0.884 - 0.884 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
56. znf512 ENSDARG00000041910 20 0.882 - 0.882 - - - - - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
57. nhlh2 ENSDARG00000025495 1860 0.88 - 0.880 - - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
58. dlb ENSDARG00000004232 5120 0.878 - 0.878 - - - - - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
59. CR407547.1 ENSDARG00000117572 41 0.877 - 0.877 - - - - - - -
60. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.877 - 0.877 - - - - - - -
61. wu:fb15e04 wu:fb15e04 1713 0.876 - 0.876 - - - - - - -
62. rars2 ENSDARG00000032277 54 0.875 - 0.875 - - - - - - - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
63. kcnd3 ENSDARG00000056101 324 0.874 - 0.874 - - - - - - - potassium voltage-gated channel, Shal-related subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5626]
64. EHD4 ENSDARG00000054302 46 0.872 - 0.872 - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
65. calca ENSDARG00000056590 150 0.871 - 0.871 - - - - - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
66. neurog1 ENSDARG00000056130 3924 0.87 - 0.870 - - - - - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
67. dla ENSDARG00000010791 9281 0.87 - 0.870 - - - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
68. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.87 - 0.870 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
69. ephb3a ENSDARG00000031548 1872 0.869 - - - - - - 0.869 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
70. si:dkeyp-118a3.2 ENSDARG00000086957 2106 0.867 - 0.867 - - - - - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
71. relnl relnl 863 0.867 - 0.867 - - - - - - -
72. atp1b4 ENSDARG00000053262 1337 0.866 - 0.866 - - - - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
73. PEG3_30 PEG3_30 60 0.865 - 0.865 - - - - - - -
74. CLIP3 ENSDARG00000054456 734 0.865 - 0.865 - - - - - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
75. NRSN2 NRSN2 57 0.863 - - - - - - 0.863 - -
76. SNORD83 SNORD83 43 0.863 - - - - - - 0.863 - -
77. lcmt1 ENSDARG00000045140, ENSDARG00000111263 413 0.862 0.862 - - - - - - - - leucine carboxyl methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-75]
78. apoa1bp 529 0.859 0.859 - - - - - - - - apolipoprotein A-I binding protein
79. AKR1C1 AKR1C1 32 0.858 - 0.858 - - - - - - -
80. mitfa ENSDARG00000003732 1288 0.858 - 0.858 - - - - - - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
81. nfe2l1a ENSDARG00000030616, ENSDARG00000116760 68 0.856 0.856 - - - - - - - - nuclear factor, erythroid 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-040630-5]
82. dbx2 2971 0.856 - 0.856 - - - - - - - developing brain homeobox 2
83. plekhg6 ENSDARG00000086056 368 0.856 0.856 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
84. ttc9b ENSDARG00000068421 251 0.855 - 0.855 - - - - - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
85. cpeb1a ENSDARG00000045932 81 0.855 - 0.855 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
86. sv2bb ENSDARG00000060711 196 0.855 - 0.855 - - - - - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
87. pmela ENSDARG00000091298 5179 0.854 - 0.854 - - - - - - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
88. sprb ENSDARG00000058553 1694 0.853 - 0.853 - - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
89. spi1a ENSDARG00000067797 113 0.852 - 0.852 - - - - - - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
90. glrba ENSDARG00000052782, ENSDARG00000117018 4 0.852 - 0.852 - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
91. CU915778.2 CU915778.2 194 0.852 - 0.852 - - - - - - -
92. pigf ENSDARG00000032780 7 0.852 - 0.852 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
93. LINGO2 LINGO2 300 0.852 - 0.852 - - - - - - -
94. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 0.852 - 0.852 - - - - - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
95. CABZ01041804.1 CABZ01041804.1 312 0.852 - 0.852 - - - - - - -
96. CABZ01061873.1 CABZ01061873.1 51 0.852 - 0.852 - - - - - - -
97. fat3a ENSDARG00000033840 902 0.852 - 0.852 - - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
98. chek2 ENSDARG00000025820, ENSDARG00000115597 77 0.851 - 0.851 - - - - - - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
99. zhx2 zhx2 365 0.851 0.851 - - - - - - - -
100. BX548000.3 BX548000.3 241 0.851 0.851 - - - - - - - -

There are 724 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA