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Results for rnf20

Gene Name Gene ID Reads Annotation
rnf20 ENSDARG00000016664 3641 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]










Genes with expression patterns similar to rnf20

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf20 ENSDARG00000016664 3641 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
2. ndfip2 ENSDARG00000033928 3129 2.472 - - - 0.733 0.966 - - - 0.773 Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
3. kansl3 ENSDARG00000029556 2487 1.947 - - 0.963 - 0.984 - - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
4. ctnnbip1 ENSDARG00000038954 2519 1.946 - - 0.959 - 0.987 - - - - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
5. tmem33 ENSDARG00000041332 2883 1.91 - - 0.928 - 0.982 - - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
6. yy1a ENSDARG00000042796 4982 1.908 - - 0.925 - 0.983 - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
7. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.903 - - 0.911 - 0.992 - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
8. CORO1C CORO1C 5554 1.891 - - 0.912 - 0.979 - - - -
9. CR387996.1 ENSDARG00000097774 3037 1.86 - - - - 0.991 - - - 0.869
10. CR293507.1 ENSDARG00000112572 3198 1.853 - - - - - - 1.000 - 0.853
11. impdh1b ENSDARG00000029524 7472 1.815 - - 0.895 - - - 0.920 - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
12. nfu1 ENSDARG00000068125 1743 1.81 - - - - 0.987 - - - 0.823 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
13. crebbpa ENSDARG00000104609 1739 1.81 - - 0.970 - - - - - 0.840 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
14. pdlim4 ENSDARG00000068973 2567 1.78 - - - - - - 1.000 - 0.780 PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
15. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 1.779 - - - - 0.991 - - 0.788 - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
16. selt1b 1396 1.776 - - 0.964 - - - - - 0.812 selenoprotein T, 1b
17. tjp1a ENSDARG00000077506 2658 1.772 - - 0.957 - - - - - 0.815 tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
18. klc2 3058 1.771 - - - - 0.986 0.785 - - - kinesin light chain 2
19. nkain1 ENSDARG00000006859 1961 1.769 - - - - 0.994 0.775 - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
20. xrcc5_1 ENSDARG00000099298 1533 1.768 - - 0.960 - - - - - 0.808 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
21. nrg1 ENSDARG00000104314 1081 1.756 - - 0.972 - - - - - 0.784 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
22. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.755 - - 0.930 - - - - - 0.825
23. zgc:162967 zgc:162967 2132 1.743 - - - - 0.994 - - 0.749 -
24. fam50a ENSDARG00000024895 3020 1.729 - - 0.965 0.764 - - - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
25. RAB39B RAB39B 482 1.724 - - 0.970 - - - - 0.754 -
26. fut8 fut8 652 1.72 - - 0.974 0.746 - - - - -
27. gbp ENSDARG00000040059 1939 1.717 - - - - 0.988 0.729 - - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
28. reep3l reep3l 608 1.717 - - - 0.726 0.991 - - - -
29. ss18 ENSDARG00000002970 2618 1.714 - - 0.956 - - 0.758 - - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
30. ZNF618 ENSDARG00000071469 2347 1.714 - - 0.959 - - - - - 0.755 zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
31. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.709 - - - - 0.960 - - - 0.749 protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
32. wu:fc26g07 wu:fc26g07 1165 1.705 - - 0.965 0.740 - - - - -
33. CT573103.1 ENSDARG00000097550 950 1.702 - 0.736 0.966 - - - - - -
34. gnb4b ENSDARG00000115383 7457 1.701 - - - - 0.834 - - - 0.867 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
35. serp1 ENSDARG00000099439 23682 1.697 - - - - 0.706 - 0.991 - - stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
36. GUSB ENSDARG00000063126 2712 1.695 - - 0.945 - - - - - 0.750 glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
37. MIS12 ENSDARG00000026454 649 1.693 - - - 0.830 - - - - 0.863 MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
38. dek ENSDARG00000070108 2262 1.688 - 0.725 0.963 - - - - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
39. apex1 ENSDARG00000045843 6345 1.688 - - - - 0.941 0.747 - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
40. npm1b ENSDARG00000037675 5448 1.672 - - 0.915 - - - - - 0.757 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
41. greb1l ENSDARG00000039196 2085 1.666 - - 0.938 0.728 - - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
42. hnrnph1l ENSDARG00000005551 8727 1.663 - - - 0.744 0.919 - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
43. paf1 ENSDARG00000098432 1806 1.643 - 0.811 - - - - - - 0.832 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
44. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.642 - - 0.864 - 0.778 - - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
45. eif3ja ENSDARG00000012603 6324 1.634 - 0.701 0.933 - - - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
46. fam118b ENSDARG00000078983 1822 1.631 - - - - - 0.744 - - 0.887 family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
47. si:dkey-95p16.2 ENSDARG00000093484 3413 1.63 - - 0.926 0.704 - - - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
48. CASKIN2_1 CASKIN2_1 2299 1.609 - - - 0.825 - - - - 0.784
49. gpkow ENSDARG00000029612 1395 1.607 - 0.733 - - - - - - 0.874 G patch domain and KOW motifs [Source:ZFIN;Acc:ZDB-GENE-030616-159]
50. u2af2a ENSDARG00000012505 2920 1.605 - 0.740 - - - - - - 0.865 U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
51. ptbp1a ENSDARG00000019362 6290 1.599 - - 0.869 - - - - - 0.730 polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
52. pwp2h ENSDARG00000037109 1395 1.596 - 0.892 - 0.704 - - - - - PWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
53. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.589 - - - 0.727 - - - - 0.862 sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
54. imp4 ENSDARG00000054540 1396 1.575 - 0.729 - - - - - - 0.846 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
55. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.573 - 0.718 - - 0.855 - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
56. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.556 - - 0.790 - - - - - 0.766 clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
57. cog2 ENSDARG00000004037 462 1.555 - - - 0.733 - - - - 0.822 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
58. hyou1 ENSDARG00000013670 4172 1.554 - - 0.812 - - - - - 0.742 hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
59. rbbp5 ENSDARG00000042147 702 1.554 - 0.718 - 0.836 - - - - - retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
60. CABZ01084579.1 CABZ01084579.1 7181 1.547 - - 0.760 - - - - - 0.787
61. ash2l ENSDARG00000060392 4916 1.543 - 0.727 - - - - - - 0.816 ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
62. ncl ENSDARG00000002710 16951 1.531 - 0.716 - - 0.815 - - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
63. cdkn2aipnl ENSDARG00000053395 5107 1.517 - - - - - 0.706 - - 0.811 CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
64. pgam5 ENSDARG00000035608 4044 1.513 - - - 0.704 - - - - 0.809 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
65. tfap4 ENSDARG00000103923 2203 1.508 - 0.704 - - - - - - 0.804 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
66. ube2g1b ENSDARG00000069527 5376 1.492 - 0.755 - - - - - - 0.737 ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
67. APBA3 APBA3 852 1.489 - - - 0.717 - - - - 0.772
68. dnajb1a ENSDARG00000099383 871 1.487 - - - - - 0.706 - - 0.781 DnaJ (Hsp40) homolog, subfamily B, member 1a [Source:ZFIN;Acc:ZDB-GENE-040801-90]
69. krr1 ENSDARG00000011246 1624 1.485 - 0.727 - - - 0.758 - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
70. smarcb1b ENSDARG00000011594 2413 1.481 - - - - - - - 0.714 0.767 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
71. pias4a ENSDARG00000007081 4264 1.442 - - - - - 0.729 - - 0.713 protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
72. twf1a ENSDARG00000115712 3465 1 - - - - - - 1.000 - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
73. smurf2 ENSDARG00000038067 2057 1 - - - - - - 1.000 - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
74. C7H16orf87 C7H16orf87 5197 1 - - - - - - 1.000 - -
75. hes6 ENSDARG00000019335 4754 1 - - - - - - 1.000 - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
76. tmem5 1630 1 - - - - - - 1.000 - - transmembrane protein 5
77. XPR1 XPR1 3354 1 - - - - - - 1.000 - -
78. si:dkey-42p8.3 1117 1 - - - - - - 1.000 - - si:dkey-42p8.3, transcript variant X1
79. cers2a ENSDARG00000013704 4239 1 - - - - - - 1.000 - - ceramide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020808-2]
80. slc22a7a ENSDARG00000056028 2426 1 - - - - - - 1.000 - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
81. csrp1a ENSDARG00000006603 5188 1 - - - - - - 1.000 - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
82. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 1 - - - - - - 1.000 - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
83. RB1CC1 ENSDARG00000076559 2771 1 - - - - - - 1.000 - - RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
84. acat2 ENSDARG00000007127 3052 1 - - - - - - 1.000 - - acetyl-CoA acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-990714-22]
85. epdl1 ENSDARG00000076386 1747 0.999 - - - - - - 0.999 - - ependymin-like 1 [Source:ZFIN;Acc:ZDB-GENE-090710-3]
86. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 0.999 - - - - - - 0.999 - - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
87. SAMD4A ENSDARG00000075759 3282 0.999 - - - - - - 0.999 - - sterile alpha motif domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-070720-7]
88. st14a ENSDARG00000061173 3800 0.999 - - - - - - 0.999 - - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
89. sucla2 ENSDARG00000005359 5992 0.998 - - - - - - 0.998 - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
90. matn3a ENSDARG00000069245 2410 0.998 - - - - - - 0.998 - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
91. si:ch211-166a6.5 ENSDARG00000079745 11111 0.997 - - - - - - 0.997 - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
92. hp1bp3 ENSDARG00000044669 23708 0.996 - - - - - - 0.996 - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
93. kars ENSDARG00000103799 20937 0.996 - - - - - - 0.996 - - lysyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-021115-8]
94. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 0.995 - - - - - - 0.995 - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
95. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 0.994 - - - - 0.994 - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
96. zgc:162816 ENSDARG00000070416 974 0.993 - - - - 0.993 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
97. shisa3 ENSDARG00000075467 485 0.993 - - - - 0.993 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
98. neb ENSDARG00000032630, ENSDARG00000109273 19493 0.993 - - - - - - 0.993 - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
99. NDST1 NDST1 1584 0.992 - - - - 0.992 - - - -
100. smarcal1 ENSDARG00000102265 1921 0.992 - - - - 0.992 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]

There are 1295 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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