Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rnf2

Gene Name Gene ID Reads Annotation
rnf2 ENSDARG00000010381 3427 ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]










Genes with expression patterns similar to rnf2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf2 ENSDARG00000010381 3427 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
2. clta ENSDARG00000045618, ENSDARG00000115484 11767 3.075 - - 0.821 0.704 - 0.812 0.738 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
3. psmb7 ENSDARG00000037962 11542 3.055 0.736 - 0.861 - - - 0.725 - 0.733 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
4. psmd14 ENSDARG00000063100 15711 2.533 - 0.976 0.824 - - 0.733 - - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
5. si:ch211-51e12.7 ENSDARG00000045914 9598 2.504 0.787 - 0.858 - - 0.859 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
6. setdb1a ENSDARG00000041243 1952 2.444 - - 0.963 - - - 0.762 - 0.719 SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
7. spag7 ENSDARG00000011555 3224 2.437 - 0.982 - - - - 0.744 0.711 - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
8. gstm gstm 4064 2.402 0.731 - 0.903 - - - 0.768 - -
9. vdac1 ENSDARG00000045132 8051 2.375 0.715 - 0.849 - - 0.811 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
10. hdac1 ENSDARG00000015427 19804 2.373 - 0.830 - - - 0.839 - - 0.704 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
11. sumo1 ENSDARG00000044267 4242 2.371 - - - - - - 0.796 0.787 0.788 small ubiquitin-like modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2186]
12. smarce1 ENSDARG00000016871 9628 2.313 - - 0.786 - - 0.797 0.730 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
13. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.313 - - 0.812 - - - - 0.800 0.701 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
14. snrpf ENSDARG00000105037 10241 2.308 0.734 - - - - 0.828 0.746 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
15. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 2.299 - - - 0.748 - 0.767 - 0.784 - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
16. tma7 ENSDARG00000071670 13372 2.293 - 0.832 - - - - 0.719 - 0.742 translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
17. SNRPG ENSDARG00000099667 18697 2.257 - - - - - 0.715 0.776 - 0.766 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
18. lypla2 ENSDARG00000053656 8971 2.256 - - - - - 0.756 0.789 - 0.711 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
19. pak2b ENSDARG00000018476 4331 2.255 - - - - - 0.758 0.716 - 0.781 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
20. rbm25 rbm25 3629 2.245 - - - - - 0.726 0.742 - 0.777
21. pl10 pl10 10795 2.232 - - 0.706 - - 0.765 0.761 - -
22. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.231 - - 0.709 - - 0.809 - - 0.713 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
23. tmpoa ENSDARG00000007315 3638 2.218 - - - - - 0.746 0.750 0.722 - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
24. MZT1 ENSDARG00000096668 2514 2.193 0.715 - - - - 0.707 0.771 - - mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
25. hnrnpub ENSDARG00000004735 16496 2.187 0.710 - - - - 0.742 - - 0.735 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
26. bcl11ab ENSDARG00000063153 3032 2.179 - - - - - 0.751 0.722 - 0.706 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
27. wu:fb30e12 wu:fb30e12 1254 2.154 - - - - - 0.720 0.732 - 0.702
28. rac1 rac1 7341 2.144 0.702 - - - - 0.733 0.709 - -
29. CREBZF ENSDARG00000089787 4261 2.13 - - - - - 0.708 0.707 - 0.715 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
30. pank1b ENSDARG00000010098 3202 1.948 - 0.984 0.964 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
31. ptpn9a ENSDARG00000077495 2295 1.943 - 0.991 0.952 - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
32. strn3 ENSDARG00000001729 4608 1.934 - 0.990 0.944 - - - - - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
33. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 1.929 - 0.991 0.938 - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
34. flot2a ENSDARG00000004830 5276 1.899 - 0.943 0.956 - - - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
35. slc1a5 ENSDARG00000099186 7580 1.891 - 0.987 0.904 - - - - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
36. aqp3a ENSDARG00000003808 9044 1.844 - 0.953 0.891 - - - - - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
37. smg5 ENSDARG00000041481 1286 1.8 - - 0.963 - - - 0.837 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
38. pkd2 ENSDARG00000014098 2384 1.798 - 0.992 - - - 0.806 - - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
39. sirt1 ENSDARG00000068064 1393 1.775 - 0.986 - - - 0.789 - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
40. wdr5 ENSDARG00000016903 4834 1.77 - 0.984 - - - - - - 0.786 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
41. rhogc ENSDARG00000028401 2671 1.755 - 0.789 0.966 - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
42. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.749 - 0.984 - - - - 0.765 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
43. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.742 - 0.987 - - - 0.755 - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
44. csrnp2 ENSDARG00000075972 1650 1.735 - 0.987 - - - 0.748 - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
45. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.735 - 0.991 - - - - - - 0.744 bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
46. psma6a ENSDARG00000019398 2702 1.734 - 0.981 - - - - 0.753 - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
47. ZNF618 ENSDARG00000071469 2347 1.725 - - 0.949 - - - - 0.776 - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
48. myo18aa ENSDARG00000075752 2021 1.724 0.795 0.929 - - - - - - - myosin XVIIIAa [Source:ZFIN;Acc:ZDB-GENE-080425-5]
49. igsf9a ENSDARG00000075864 1870 1.724 - 0.988 - - - 0.736 - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
50. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.72 - - 0.938 - - 0.782 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
51. tdg tdg 3269 1.715 - - 0.940 - - 0.775 - - -
52. cse1l ENSDARG00000006963 3261 1.714 - 0.990 - - - - 0.724 - - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
53. nr2f1a ENSDARG00000052695 5037 1.712 - 0.981 - - - 0.731 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
54. wu:fb17g07 wu:fb17g07 10567 1.711 - - 0.956 - - - 0.755 - -
55. ncapd2 ENSDARG00000005058 2819 1.707 - 0.977 - - - - 0.730 - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
56. mcts1 ENSDARG00000025972 4662 1.701 - - 0.946 - - - 0.755 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
57. PSIP1 PSIP1 5252 1.7 0.722 0.978 - - - - - - -
58. ehd3 ENSDARG00000007869 3238 1.699 - 0.954 - - - - 0.745 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
59. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 1.697 - 0.992 - - - - 0.705 - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
60. ubn2 ubn2 534 1.694 - 0.988 - - - 0.706 - - -
61. rerea ENSDARG00000077353 4162 1.69 - 0.986 - - - 0.704 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
62. qki2 ENSDARG00000010018 2230 1.688 - - 0.965 - - 0.723 - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
63. mrpl36 ENSDARG00000070607 4069 1.687 0.721 0.966 - - - - - - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
64. CABZ01072954.1 CABZ01072954.1 2330 1.684 - - 0.952 - - - 0.732 - -
65. rtf1 ENSDARG00000008947 6596 1.679 - 0.947 - - - 0.732 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
66. atf4b2 atf4b2 4734 1.674 - 0.956 - - - - 0.718 - -
67. snrpc ENSDARG00000009871 9567 1.672 - 0.951 - - - - - - 0.721 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
68. dyrk1ab ENSDARG00000023814 1769 1.672 - - 0.967 - - - - - 0.705 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
69. xrcc5_1 ENSDARG00000099298 1533 1.667 - - 0.964 - - - 0.703 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
70. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.665 0.746 0.919 - - - - - - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
71. cbx3a ENSDARG00000003860 4922 1.662 - - 0.871 - - - 0.791 - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
72. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.653 - - 0.934 - - - 0.719 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
73. mad2l1 ENSDARG00000004713 3398 1.652 - - 0.950 - - - - - 0.702 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
74. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.651 - - 0.898 - - 0.753 - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
75. npm1b ENSDARG00000037675 5448 1.643 - - 0.841 - - 0.802 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
76. id2a ENSDARG00000055283 7428 1.636 - - 0.913 - - 0.723 - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
77. CORO1C CORO1C 5554 1.63 0.707 - 0.923 - - - - - -
78. cd99l2 ENSDARG00000056722 5036 1.628 - - 0.871 - - 0.757 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
79. si:dkey-67c22.2 ENSDARG00000055389 6410 1.627 - - - - - 0.795 0.832 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
80. cpsf3 ENSDARG00000027649 6897 1.627 - - 0.838 - - - 0.789 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
81. tufm ENSDARG00000104173 9292 1.618 - - 0.830 - - - 0.788 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
82. dek ENSDARG00000070108 2262 1.614 - - 0.902 - - 0.712 - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
83. ndrg3a ENSDARG00000013087 5581 1.613 - 0.879 - - - - 0.734 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
84. lsm6 ENSDARG00000036995 4377 1.611 - - 0.868 - - - 0.743 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
85. kifc1 ENSDARG00000001558 6658 1.61 - - 0.869 - - - 0.741 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
86. smc1al ENSDARG00000058203 8838 1.6 - - - - - 0.815 0.785 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
87. ptp4a1 ENSDARG00000006242 10267 1.593 - 0.730 - - - - 0.863 - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
88. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.586 0.708 0.878 - - - - - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
89. rnf10 ENSDARG00000079687 6768 1.58 - 0.856 - - - - - - 0.724 ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
90. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.569 - - - - - 0.790 0.779 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
91. nusap1 ENSDARG00000002403 6953 1.568 - - - - - 0.763 0.805 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
92. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.568 0.769 - - - - - 0.799 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
93. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.567 - - 0.858 - - 0.709 - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
94. zgc:193541 ENSDARG00000092873 21276 1.567 0.866 - - - - - 0.701 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
95. tra2a ENSDARG00000007863 4449 1.566 - - - - - 0.827 0.739 - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
96. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.565 - - - - - 0.817 0.748 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
97. mllt10 ENSDARG00000045401 7557 1.564 - - - - - 0.838 0.726 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
98. phb ENSDARG00000057414 9551 1.56 0.828 - - - - - 0.732 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
99. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 1.553 - - - - - - 0.798 - 0.755 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
100. apex1 ENSDARG00000045843 6345 1.549 0.769 - - - - - 0.780 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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