Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rnf17

Gene Name Gene ID Reads Annotation
rnf17 ENSDARG00000056387, ENSDARG00000113359 36 ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]










Genes with expression patterns similar to rnf17

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
2. TTC18 TTC18 58 2.636 - 0.775 - - - 0.888 0.973 - -
3. APOL4 APOL4 27 2.466 - - - 0.774 - - 0.973 - 0.719
4. cacnb2a ENSDARG00000099045 374 1.973 1.000 - - - - - 0.973 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
5. si:ch211-160d14.9 8 1.966 1.000 - - - - - 0.966 - - si:ch211-160d14.9, transcript variant X1
6. F2RL3 ENSDARG00000079399 29 1.966 1.000 - - - - - 0.966 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
7. slc5a12 ENSDARG00000005004 15 1.966 - 1.000 - - - - 0.966 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
8. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1.966 - 1.000 - - - - 0.966 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
9. 5S_rRNA_10 5S_rRNA_10 2 1.966 1.000 - - - - - 0.966 - -
10. SOX8 SOX8 22 1.966 1.000 - - - - - 0.966 - -
11. btr29 ENSDARG00000099138 5 1.966 - - - - - - 0.966 - 1.000 bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
12. irgq2 ENSDARG00000068657 4 1.963 1.000 - - - - 0.963 - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
13. CR847543.1 ENSDARG00000086708 155 1.963 1.000 - - - - 0.963 - - -
14. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.948 - 1.000 - - - 0.948 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
15. TAF4_1 TAF4_1 30 1.948 1.000 - - - - 0.948 - - -
16. FAM149A ENSDARG00000073709 7 1.948 - 1.000 - - - 0.948 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
17. SNORD89 SNORD89 1 1.948 1.000 - - - - 0.948 - - -
18. si:ch211-13o20.1 si:ch211-13o20.1 30 1.948 1.000 - - - - 0.948 - - -
19. stxbp4 ENSDARG00000076997 20 1.948 - 1.000 - - - 0.948 - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
20. dpyda dpyda 12 1.948 - 1.000 - - - 0.948 - - -
21. pla2g15 ENSDARG00000103271 4 1.948 1.000 - - - - 0.948 - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
22. si:dkeyp-80c12.4 ENSDARG00000036479 7 1.947 - 0.947 - - - - - - 1.000 si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
23. cyb561 ENSDARG00000038176 55 1.939 1.000 0.939 - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
24. GLB1L2 ENSDARG00000034941 74 1.936 1.000 0.936 - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
25. XAF1 ENSDARG00000068939 12 1.933 - - - - - 0.963 - - 0.970 XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]
26. slc9a3.1 ENSDARG00000058498 46 1.928 - 0.982 - - - - 0.946 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
27. VSIG10L ENSDARG00000089237 12 1.914 - - - - - 0.948 0.966 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
28. ZNF337_23 ZNF337_23 39 1.914 - - - - - 0.948 0.966 - -
29. si:ch73-27e22.5 si:ch73-27e22.5 10 1.914 - - - - - 0.948 0.966 - -
30. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.914 - - - - - 0.948 0.966 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
31. si:ch211-203b20.4 ENSDARG00000091790 3 1.914 - - - - - 0.948 0.966 - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
32. si:dkey-121j17.5 ENSDARG00000014232 18 1.914 - - - - - 0.948 0.966 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
33. EFEMP1_1 EFEMP1_1 8 1.883 - 1.000 - - - - - - 0.883
34. CABZ01069081.1 CABZ01069081.1 16 1.872 1.000 - - - - - 0.872 - -
35. pld6 ENSDARG00000059951 17 1.867 - - - - - - 0.867 - 1.000 phospholipase D family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3825]
36. pde10a ENSDARG00000003449 60 1.854 - 0.891 - - - 0.963 - - - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
37. ripply3 ENSDARG00000036974 30 1.84 - - - - - 0.874 0.966 - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
38. si:dkeyp-35e5.9 ENSDARG00000103527 24 1.836 - - - - - 0.948 0.888 - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
39. rx3 ENSDARG00000052893 43 1.832 - - - 0.866 - - 0.966 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
40. diaph3 ENSDARG00000090785 16 1.832 - - - 0.884 - 0.948 - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
41. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 1.823 - 0.935 - - - 0.888 - - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
42. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.816 1.000 0.816 - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
43. BX571739.1 BX571739.1 45 1.813 1.000 - - - - 0.813 - - -
44. or115-14 ENSDARG00000094235 17 1.808 1.000 - - - - 0.808 - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
45. fam163b ENSDARG00000073914 46 1.808 1.000 - - - - 0.808 - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
46. adgb ENSDARG00000005595 118 1.793 - - - - - 0.943 0.850 - - androglobin [Source:ZFIN;Acc:ZDB-GENE-041001-205]
47. scxa ENSDARG00000035695 255 1.79 1.000 - - 0.790 - - - - - scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]
48. igfbp6b ENSDARG00000090833 37 1.788 - - - 0.840 - 0.948 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
49. il10 ENSDARG00000078147 3 1.782 - - - - - 0.816 0.966 - - interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
50. CR339057.1 CR339057.1 7 1.775 - 0.809 - - - - 0.966 - -
51. vipr1b ENSDARG00000059058 62 1.774 1.000 - - - - - 0.774 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
52. si:dkey-104n9.1 ENSDARG00000093042 41 1.762 - 0.796 - - - - 0.966 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
53. cldn10l2 ENSDARG00000105042 11 1.753 - 0.936 - - - - 0.817 - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
54. si:ch211-117m22.2 si:ch211-117m22.2 60 1.75 1.000 - - - - 0.750 - - -
55. bmpr2b ENSDARG00000020057 8 1.744 1.000 - 0.744 - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
56. LAMA3 ENSDARG00000071462 5 1.742 - - 0.776 - - - 0.966 - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
57. plxnc1 ENSDARG00000015278 501 1.733 - 1.000 - - - 0.733 - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
58. si:ch211-284e13.11 ENSDARG00000091997 3 1.732 - 1.000 0.732 - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
59. GMEB2 ENSDARG00000093240 6 1.732 1.000 - 0.732 - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
60. smpd3 ENSDARG00000098226 1 1.732 1.000 - 0.732 - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
61. ARHGAP17 ARHGAP17 29 1.732 1.000 - - - - - 0.732 - -
62. ubxn10 ENSDARG00000052535 24 1.731 1.000 - - - - - 0.731 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
63. pgap1 ENSDARG00000062465 30 1.729 - 1.000 - 0.729 - - - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
64. si:ch211-258f1.3 ENSDARG00000105119 23 1.729 - 0.947 - - - - 0.782 - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
65. si:dkey-217m5.3 si:dkey-217m5.3 22 1.717 1.000 - - - - - 0.717 - -
66. KCNJ3 KCNJ3 24 1.714 - 1.000 - 0.714 - - - - -
67. psme1 ENSDARG00000002165, ENSDARG00000115834 72 1.703 - 1.000 - - - 0.703 - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
68. fgf24 ENSDARG00000037677 242 1.703 1.000 - - - - 0.703 - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
69. aox1 aox1 14 1.699 - - - - - 0.733 0.966 - -
70. cyp7a1a cyp7a1a 1 1.698 - - 0.732 - - - 0.966 - -
71. rab44 ENSDARG00000028389 27 1.693 - - - 0.884 - 0.809 - - - RAB44, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040724-117]
72. CABZ01088933.1 CABZ01088933.1 40 1.692 - - - - 0.719 - 0.973 - -
73. CT573322.1 CT573322.1 38 1.69 - - - - - 0.724 0.966 - -
74. gcdhl gcdhl 38 1.68 - - 0.732 - - 0.948 - - -
75. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1.68 - - 0.732 - - 0.948 - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
76. si:dkey-52l1.1 si:dkey-52l1.1 1 1.68 - - 0.732 - - 0.948 - - -
77. si:ch211-53m15.1 si:ch211-53m15.1 28 1.68 - - 0.732 - - 0.948 - - -
78. rap2ab ENSDARG00000040246 63 1.677 0.746 0.931 - - - - - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
79. si:ch211-196n4.5 si:ch211-196n4.5 63 1.676 0.881 - - - - - 0.795 - -
80. LARP4 LARP4 48 1.675 - 0.727 - - - 0.948 - - -
81. si:dkey-26g8.10 si:dkey-26g8.10 100 1.674 - 0.957 - - - - 0.717 - -
82. ak7a ENSDARG00000019001 71 1.672 - - - - - 0.789 0.883 - - adenylate kinase 7a [Source:ZFIN;Acc:ZDB-GENE-040724-122]
83. MYOM2 MYOM2 6 1.671 - 0.939 - - - - 0.732 - -
84. si:ch211-181d7.1 ENSDARG00000088274, ENSDARG00000091847 18 1.66 - 0.942 - - - 0.718 - - - si:ch211-181d7.1 [Source:ZFIN;Acc:ZDB-GENE-121214-14]
85. cnr1 ENSDARG00000009020 33 1.658 - 0.882 - - - - 0.776 - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
86. ribc1 ENSDARG00000055739 32 1.65 - - - - - 0.948 0.702 - - RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
87. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 1.604 0.703 - - - - 0.901 - - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
88. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.598 - 0.766 - - - 0.832 - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
89. spp1 ENSDARG00000044276 34 1.595 - 0.816 - - - - 0.779 - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
90. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1.593 - - 0.732 0.861 - - - - -
91. tbc1d2b ENSDARG00000061986 247 1.583 - 0.796 - - - - 0.787 - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
92. lss ENSDARG00000061274 68 1.583 - - - 0.776 - - 0.807 - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
93. stub1 ENSDARG00000045228 105 1.582 - 0.727 - 0.855 - - - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
94. tdrd9 ENSDARG00000013453 22 1.574 - - 0.732 - - - - - 0.842 tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
95. GPR64 GPR64 58 1.574 - 0.723 - - - - 0.851 - -
96. si:ch211-207c7.6 si:ch211-207c7.6 23 1.57 0.731 - - - - - 0.839 - -
97. CPNE7 ENSDARG00000102584 95 1.57 0.746 - - - - - 0.824 - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
98. BAIAP2L2 BAIAP2L2 31 1.567 - 0.847 - - - 0.720 - - -
99. CR352265.1 ENSDARG00000062758 39 1.566 - 0.810 - - - - 0.756 - -
100. slc24a1 ENSDARG00000041431 33 1.536 - - - - - 0.730 0.806 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]

There are 1587 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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