Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnf165a

Gene Name Gene ID Reads Annotation
rnf165a ENSDARG00000077906 133 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]










Genes with expression patterns similar to rnf165a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf165a ENSDARG00000077906 133 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
2. nr4a2a ENSDARG00000017007 140 2.672 0.729 - - - - 1.000 0.943 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
3. cdkn2d ENSDARG00000094176 190 2.482 0.940 0.813 - - - - 0.729 - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
4. FGFBP3 FGFBP3 993 2.4 0.793 - - - - 0.706 0.901 - -
5. ANKRD13D ENSDARG00000098140 88 2.289 0.740 - - - - 0.771 0.778 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
6. CU914780.1 ENSDARG00000114023 105 2.237 0.723 - - - - 0.766 0.748 - -
7. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.228 0.762 0.720 - - - - 0.746 - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
8. zgc:165481 ENSDARG00000060092 95 2.196 0.729 0.718 - - - 0.749 - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
9. rpz3 ENSDARG00000069728 11 1.943 - - - - - 1.000 0.943 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
10. si:dkey-253d23.9 ENSDARG00000074820 24 1.943 - - - - - 1.000 0.943 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
11. foxb1a ENSDARG00000089042 101 1.919 - - - - - 1.000 0.919 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
12. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1.903 - - - - - 1.000 0.903 - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
13. bbs5 ENSDARG00000039827 211 1.885 - 0.885 - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
14. cadpsa ENSDARG00000043661 160 1.877 - - - - - 0.889 - - 0.988 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
15. mir124-6 64 1.844 - - - - - 1.000 0.844 - - microRNA 124-6
16. si:dkey-15f23.2 si:dkey-15f23.2 2 1.844 - - - - - 1.000 0.844 - -
17. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.844 - - - - - 1.000 0.844 - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
18. si:ch211-76l23.5 si:ch211-76l23.5 26 1.844 - - - - - 1.000 0.844 - -
19. gng2 ENSDARG00000056831 81 1.844 - - - - - 1.000 0.844 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
20. vwc2 ENSDARG00000076495 22 1.844 - - - - - 1.000 0.844 - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
21. b3gat2 ENSDARG00000030733 348 1.838 - - - - - - 0.863 - 0.975 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
22. ACBD3 ENSDARG00000042623 159 1.837 0.840 - - - - - - - 0.997 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
23. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.823 - - - - - 0.937 0.886 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
24. igf1 ENSDARG00000094132 59 1.779 - - - - 0.779 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
25. CR524483.1 ENSDARG00000109248 86 1.769 - - - - - 0.844 0.925 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
26. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.767 - 0.806 - - - - - - 0.961 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
27. tbc1d31 ENSDARG00000074623 94 1.766 - 0.839 - - - 0.927 - - - TBC1 domain family, member 31 [Source:ZFIN;Acc:ZDB-GENE-061218-4]
28. KIF2A_1 ENSDARG00000043571 189 1.764 - - - - - - 0.779 - 0.985 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
29. si:ch1073-219n12.1 71 1.758 - 0.758 - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
30. si:ch211-258f1.3 ENSDARG00000105119 23 1.75 - 0.750 - - - 1.000 - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
31. si:dkey-238f9.1 ENSDARG00000079446 51 1.749 0.749 - - - - - 1.000 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
32. slc8a4a ENSDARG00000055154 90 1.746 0.800 - - - - - 0.946 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
33. hif1al2 ENSDARG00000044550 140 1.741 - 0.741 - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
34. polg ENSDARG00000060951 33 1.74 0.740 - - - - 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
35. mir219-1 101 1.737 - - - - - 0.794 0.943 - - microRNA 219-1
36. si:ch211-237c9.3 si:ch211-237c9.3 17 1.735 - - - - 0.735 - 1.000 - -
37. BX255936.1 BX255936.1 327 1.733 - 0.785 - - - - - - 0.948
38. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.729 0.793 - - - - - 0.936 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
39. CABZ01063077.1 CABZ01063077.1 22 1.728 0.742 - - - - - 0.986 - -
40. st8sia1 ENSDARG00000098221 34 1.722 0.722 - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
41. zgc:92161 ENSDARG00000101749 27 1.718 - 0.718 - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
42. FP236810.3 FP236810.3 1 1.718 - 0.718 - - - 1.000 - - -
43. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 1.707 - - - - - 0.762 - - 0.945 dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
44. nbn ENSDARG00000040303 43 1.704 - 0.704 - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
45. r3hdm4 ENSDARG00000063254 201 1.7 - - - - - 1.000 0.700 - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
46. si:dkeyp-69c1.7 ENSDARG00000087165 31 1.693 - - - - - 0.849 0.844 - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
47. stxbp5a ENSDARG00000002656 318 1.69 0.748 - - - - - 0.942 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
48. pcdh18a ENSDARG00000089805 1096 1.69 0.794 - - - - - 0.896 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
49. GJD2_1 GJD2_1 3045 1.682 - - - - - 0.755 0.927 - -
50. efna3a ENSDARG00000014675 68 1.68 - - - - - 0.955 0.725 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
51. ano5a ENSDARG00000015731 601 1.68 - 0.712 - - - - - - 0.968 anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
52. dtnbp1b ENSDARG00000055206 64 1.679 - 0.880 - - - - 0.799 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
53. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.672 - - - - - - 0.885 - 0.787 N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
54. dscamb ENSDARG00000028118 82 1.668 - - - - - 0.767 0.901 - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
55. CABZ01032467.1 CABZ01032467.1 400 1.667 0.706 - - - - - - - 0.961
56. plekho1a ENSDARG00000061191 98 1.665 0.724 - - - - - 0.941 - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
57. COX5B ENSDARG00000015978 70 1.661 - 0.718 - - - - 0.943 - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
58. odz4 odz4 822 1.655 - - - - - - 0.750 - 0.905
59. nell2b ENSDARG00000062797 854 1.652 - - - - - - 0.843 - 0.809 neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
60. GRM8_1 GRM8_1 85 1.651 0.793 - - - - - 0.858 - -
61. si:ch211-120c15.3 ENSDARG00000101807 19 1.65 0.806 - - - - - 0.844 - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
62. pax3a ENSDARG00000010192 626 1.646 - 0.802 - - - - 0.844 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
63. USP6 USP6 613 1.645 - 0.890 - - 0.755 - - - -
64. tmcc2 ENSDARG00000046007 148 1.645 - 0.707 - - - - 0.938 - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
65. PIAS1 PIAS1 13 1.641 - 0.797 - - - - 0.844 - -
66. si:dkey-122c11.4 si:dkey-122c11.4 13 1.637 0.793 - - - - - 0.844 - -
67. si:ch211-132b12.7 ENSDARG00000068374 30 1.637 0.793 - - - - - 0.844 - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
68. ptchd4 ENSDARG00000008249 17 1.637 0.793 - - - - - 0.844 - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
69. scd ENSDARG00000033662 146 1.637 0.793 - - - - - 0.844 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
70. CR936540.2 CR936540.2 4 1.637 0.793 - - - - - 0.844 - -
71. GPR22_1 GPR22_1 28 1.637 0.793 - - - - - 0.844 - -
72. ftr14l ENSDARG00000078254 2 1.637 0.793 - - - - - 0.844 - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
73. tecrl2 tecrl2 11 1.637 0.793 - - - - - 0.844 - -
74. rexo1 ENSDARG00000026986 770 1.636 0.811 0.825 - - - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
75. slco4a1 ENSDARG00000075948 74 1.622 - - - - - 0.778 0.844 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
76. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.62 0.774 - - - - - 0.846 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
77. cradd ENSDARG00000028192 153 1.619 0.793 - - - - - 0.826 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
78. hnrnpa3 ENSDARG00000059351 453 1.618 - - - - - 0.713 0.905 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
79. lin7b ENSDARG00000037932 150 1.618 - - - - - 0.728 0.890 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
80. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.617 - - - - - 0.845 0.772 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
81. sox21b ENSDARG00000008540 1460 1.616 - - - - - - 0.814 - 0.802 SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
82. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1.615 - - - - - 0.771 0.844 - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
83. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 1.615 - - - - - 0.771 0.844 - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
84. Mar-04 Mar-04 21 1.615 - - - - - 0.771 0.844 - -
85. si:dkey-16p19.3 si:dkey-16p19.3 119 1.615 - - - - - 0.771 0.844 - -
86. lrrn3 lrrn3 137 1.613 0.748 - - - - - 0.865 - -
87. pou3f2a ENSDARG00000070220 817 1.612 - - - - - 0.767 0.845 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
88. ntng2a ENSDARG00000077367 43 1.608 - - - - - 0.764 0.844 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
89. cacna1g ENSDARG00000089913 19 1.608 - - - - - 0.764 0.844 - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]
90. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.607 - - - - - 0.807 0.800 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
91. mir219-2 129 1.606 - - - - - 0.870 0.736 - - microRNA 219-2
92. camk2b1 ENSDARG00000011065 79 1.598 0.761 0.837 - - - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
93. CABZ01038493.1 ENSDARG00000117625 983 1.593 0.729 - - - - - - - 0.864
94. mkks ENSDARG00000016139 70 1.593 0.749 - - - - - 0.844 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
95. nlgn3b ENSDARG00000062376 171 1.591 0.740 - - - - - 0.851 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
96. entpd3 ENSDARG00000035309 263 1.589 0.745 - - - - - 0.844 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
97. penka ENSDARG00000004869 161 1.589 - - - - - 0.847 0.742 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
98. tmem229b ENSDARG00000060569 516 1.586 - - - - - 0.829 0.757 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
99. FP017295.1 ENSDARG00000091185 22 1.585 0.793 0.792 - - - - - - -
100. NSUN6 ENSDARG00000103478 29 1.584 0.740 - - - - - 0.844 - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]

There are 2049 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA