Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnf141

Gene Name Gene ID Reads Annotation
rnf141 ENSDARG00000041802, ENSDARG00000113109 531 ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]










Genes with expression patterns similar to rnf141

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
2. wnt7aa ENSDARG00000044827 645 1.702 - 0.888 - 0.814 - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
3. FRRS1_1 FRRS1_1 831 1.686 - 0.918 - 0.768 - - - - -
4. six2a ENSDARG00000058004, ENSDARG00000115214 414 1.676 - 0.866 - 0.810 - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
5. trmt1l ENSDARG00000042057 466 1.67 - 0.929 - - - 0.741 - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
6. tmem150a tmem150a 543 1.64 0.718 0.922 - - - - - - -
7. tbcelb ENSDARG00000019525 299 1.64 - 0.938 - - - - 0.702 - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
8. cmc1 ENSDARG00000103670 1197 1.638 - 0.781 - 0.857 - - - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
9. smdt1 smdt1 99 1.63 - 0.907 - - - 0.723 - - -
10. ormdl2 ENSDARG00000058022 1146 1.627 - 0.856 - 0.771 - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
11. RAPGEFL1 ENSDARG00000079912 1074 1.619 - 0.855 0.764 - - - - - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
12. apool ENSDARG00000039374, ENSDARG00000111985 482 1.592 - 0.884 - - - - 0.708 - - apolipoprotein O-like [Source:ZFIN;Acc:ZDB-GENE-050327-76]
13. coil ENSDARG00000040070 863 1.579 0.717 0.862 - - - - - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
14. pex16 ENSDARG00000058202 486 1.578 - 0.831 - - 0.747 - - - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
15. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.574 - 0.824 - 0.750 - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
16. nubp2 ENSDARG00000055653 803 1.573 - 0.859 - - 0.714 - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
17. atrip ENSDARG00000063076 385 1.534 - - - 0.785 0.749 - - - - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
18. gtpbp10 ENSDARG00000040300 533 1.522 - - - 0.770 - - 0.752 - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
19. agfg1b ENSDARG00000019526 472 1.518 - - - 0.791 - 0.727 - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
20. PKP4 ENSDARG00000045331 577 1.51 - - - 0.805 - 0.705 - - - plakophilin 4 [Source:ZFIN;Acc:ZDB-GENE-120411-14]
21. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 1.488 - - 0.724 0.764 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
22. smim12 ENSDARG00000070358 895 1.478 0.748 - - - - 0.730 - - - small integral membrane protein 12 [Source:ZFIN;Acc:ZDB-GENE-050320-101]
23. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.477 - 0.731 - 0.746 - - - - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
24. gcdh gcdh 1390 1.477 - 0.775 - 0.702 - - - - -
25. ntn2 ENSDARG00000076748 368 1.472 - - - - - 0.708 0.764 - - netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]
26. SLC3A2 SLC3A2 135 1.468 0.711 - 0.757 - - - - - -
27. chd8 ENSDARG00000075543, ENSDARG00000111419 663 1.463 - - 0.718 0.745 - - - - - chromodomain helicase DNA binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6320]
28. selrc1 selrc1 453 0.963 - - - - - - 0.963 - -
29. ms4a17a.9 ENSDARG00000094854 933 0.957 - 0.957 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
30. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.954 - 0.954 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
31. rgs19 ENSDARG00000077385 783 0.949 - 0.949 - - - - - - - regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
32. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.948 - 0.948 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
33. tmem8a ENSDARG00000032795 677 0.946 - 0.946 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
34. rnf34a ENSDARG00000038300 179 0.944 - 0.944 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
35. CR376783.1 ENSDARG00000074235 259 0.938 - 0.938 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
36. tex261 ENSDARG00000044584 513 0.938 - 0.938 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
37. gga3 ENSDARG00000103667 675 0.937 - 0.937 - - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
38. si:ch73-18b11.2 ENSDARG00000094978 148 0.937 - 0.937 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
39. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.937 - 0.937 - - - - - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
40. fam105bb fam105bb 1253 0.936 - 0.936 - - - - - - -
41. kcnj1a.4 ENSDARG00000090635 356 0.935 - 0.935 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
42. sh3pxd2aa ENSDARG00000060148 913 0.933 - 0.933 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
43. alg9 ENSDARG00000012840 631 0.929 - 0.929 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
44. dirc2 ENSDARG00000009783 484 0.928 - 0.928 - - - - - - - disrupted in renal carcinoma 2 [Source:ZFIN;Acc:ZDB-GENE-040912-167]
45. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 0.928 - 0.928 - - - - - - - regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
46. casp2 ENSDARG00000062052 559 0.928 - 0.928 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
47. prkra ENSDARG00000076718 606 0.927 - 0.927 - - - - - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
48. afap1 ENSDARG00000055284 730 0.926 - 0.926 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
49. rab40c ENSDARG00000061208 1072 0.926 - 0.926 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
50. slc4a1ap ENSDARG00000034160 749 0.925 - 0.925 - - - - - - - solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080521-2]
51. fam63b 484 0.925 - 0.925 - - - - - - - family with sequence similarity 63, member B
52. kcnk13a ENSDARG00000008212 136 0.924 - 0.924 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
53. btbd6a ENSDARG00000076440 748 0.923 - 0.923 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
54. serpine2 ENSDARG00000029353 2274 0.922 - 0.922 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
55. GEMIN7 ENSDARG00000041011 529 0.922 - 0.922 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
56. ACKR3 ACKR3 235 0.922 - 0.922 - - - - - - -
57. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.921 - 0.921 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
58. trpm4 trpm4 501 0.921 - 0.921 - - - - - - -
59. TMEM71 TMEM71 696 0.921 - 0.921 - - - - - - -
60. ctdnep1b ENSDARG00000035781 65 0.92 - 0.920 - - - - - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
61. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.919 - 0.919 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
62. ISCA2 ENSDARG00000038154 489 0.919 - 0.919 - - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
63. dlat ENSDARG00000015918 657 0.919 - 0.919 - - - - - - - dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) [Source:ZFIN;Acc:ZDB-GENE-030131-2921]
64. zgc:113385 zgc:113385 297 0.919 - 0.919 - - - - - - -
65. rnls ENSDARG00000012453 338 0.919 - 0.919 - - - - - - - renalase, FAD-dependent amine oxidase [Source:ZFIN;Acc:ZDB-GENE-040718-351]
66. efna5a ENSDARG00000089790 1007 0.918 - 0.918 - - - - - - - ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
67. fancd2 ENSDARG00000053574 247 0.917 - 0.917 - - - - - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
68. cdca5 ENSDARG00000044437 2041 0.917 - 0.917 - - - - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
69. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.917 - 0.917 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
70. pgap2 ENSDARG00000044596 60 0.916 - 0.916 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
71. CABZ01066717.1 CABZ01066717.1 351 0.916 - 0.916 - - - - - - -
72. armc1 ENSDARG00000013861 175 0.914 - 0.914 - - - - - - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
73. UBASH3B UBASH3B 292 0.914 - 0.914 - - - - - - -
74. CABZ01114089.1 CABZ01114089.1 127 0.913 - 0.913 - - - - - - -
75. CYSTM1 CYSTM1 176 0.912 - 0.912 - - - - - - -
76. BX000999.4_1 BX000999.4_1 222 0.912 - 0.912 - - - - - - -
77. NUDT12 ENSDARG00000100813 378 0.912 - 0.912 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
78. si:ch1073-155h21.1 ENSDARG00000007582 137 0.911 - 0.911 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
79. si:dkey-154p10.3 ENSDARG00000068366 153 0.911 - 0.911 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
80. ube2j2 ENSDARG00000061161 844 0.91 - 0.910 - - - - - - - ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
81. esrrd ENSDARG00000015064 291 0.91 - 0.910 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
82. NUDT8 ENSDARG00000007722 329 0.91 - 0.910 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
83. rab33ba ENSDARG00000052290 914 0.91 - 0.910 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
84. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 0.909 - 0.909 - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
85. C12H10orf2 C12H10orf2 245 0.908 - 0.908 - - - - - - -
86. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.907 - 0.907 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
87. cmasb 499 0.907 - 0.907 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
88. C13H10orf32 C13H10orf32 465 0.907 - 0.907 - - - - - - -
89. fbxo42 ENSDARG00000087545 262 0.907 - 0.907 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
90. zgc:109744 ENSDARG00000070800 262 0.906 - 0.906 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
91. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.906 - 0.906 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
92. CR388047.3 ENSDARG00000117023 89 0.906 - 0.906 - - - - - - -
93. BX005256.1 ENSDARG00000106112 467 0.906 - 0.906 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
94. TEAD1 TEAD1 43 0.906 - 0.906 - - - - - - -
95. exoc3l4 ENSDARG00000058180 923 0.905 - 0.905 - - - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
96. lonp1 ENSDARG00000102765 507 0.905 - 0.905 - - - - - - - lon peptidase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4006]
97. csad ENSDARG00000026348 1461 0.904 - 0.904 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
98. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.904 - 0.904 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
99. cyp2aa1 ENSDARG00000099003 297 0.904 - 0.904 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
100. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.904 - 0.904 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]

There are 1025 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA