Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnf10

Gene Name Gene ID Reads Annotation
rnf10 ENSDARG00000079687 6768 ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]










Genes with expression patterns similar to rnf10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnf10 ENSDARG00000079687 6768 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
2. rtf1 ENSDARG00000008947 6596 2.512 - 0.838 0.860 - - 0.814 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
3. flot2a ENSDARG00000004830 5276 2.431 - 0.834 - - - - 0.809 0.788 - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
4. hnrnpk ENSDARG00000018914 8841 2.422 - 0.911 0.787 - - - 0.724 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
5. pfdn4 ENSDARG00000061228 8266 2.418 - 0.848 0.782 - - - 0.788 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
6. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.37 - 0.908 - - - 0.715 0.747 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
7. lypla2 ENSDARG00000053656 8971 2.351 - - 0.850 - - 0.725 0.776 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
8. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 2.324 - - - - - 0.805 0.704 0.815 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
9. ACVR1B ACVR1B 4824 2.278 - - - - - 0.813 0.735 - 0.730
10. u2surp ENSDARG00000061490 2814 2.273 - 0.825 - - - 0.708 0.740 - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
11. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 2.257 - 0.784 - - - 0.743 - 0.730 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
12. HIPK1_1 HIPK1_1 8096 2.244 0.759 0.737 - - - - - - 0.748
13. ube4b ENSDARG00000037017 8012 1.794 - - 0.926 - - - 0.868 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
14. nr2f6b ENSDARG00000003165 5855 1.791 - - - - - - 0.895 0.896 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
15. eya3 ENSDARG00000036100 1965 1.76 - 0.846 0.914 - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
16. cdk11b ENSDARG00000102546 1579 1.749 - 0.825 0.924 - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
17. nr2f1a ENSDARG00000052695 5037 1.745 - 0.881 0.864 - - - - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
18. gigfy2 3194 1.734 - - 0.920 - - - - 0.814 - GRB10 interacting GYF protein 2, transcript variant X1
19. TUBGCP6 1991 1.73 - - 0.915 - - - - 0.815 - tubulin, gamma complex associated protein 6
20. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.724 - - 0.920 - - - - 0.804 - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
21. TNRC6A ENSDARG00000079688 14433 1.723 - - - - - 0.851 0.872 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
22. srebf2 ENSDARG00000063438 1982 1.708 - - 0.918 - - - - 0.790 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
23. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.702 - 0.881 - - - - - 0.821 -
24. C10H11orf30 C10H11orf30 1982 1.701 - - 0.928 - - - 0.773 - -
25. mtpn ENSDARG00000104018 4264 1.701 - 0.840 - - - - - 0.861 - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
26. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.701 - - - - - 0.918 0.783 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
27. vps4b ENSDARG00000069175 1922 1.694 - 0.887 - - - - - 0.807 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
28. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.694 - 0.946 - - - 0.748 - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
29. CREB3L4 1085 1.691 - - 0.920 - - 0.771 - - - cAMP responsive element binding protein 3-like 4
30. tmem2 2572 1.684 - - 0.925 - - - 0.759 - - transmembrane protein 2, transcript variant X1
31. eif4ebp2 ENSDARG00000031819 13168 1.673 - 0.887 - - - 0.786 - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
32. rap2c ENSDARG00000015649 4709 1.664 - 0.892 - - - - 0.772 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
33. sipa1l2 ENSDARG00000061640 4545 1.663 - - 0.892 - - 0.771 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
34. thbs1b ENSDARG00000010785 3095 1.663 - - 0.925 - - - 0.738 - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
35. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.663 - - 0.826 - - - - 0.837 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
36. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.66 - - 0.910 - - - 0.750 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
37. mdh1a mdh1a 11035 1.655 - - 0.922 - - - - 0.733 -
38. sltm ENSDARG00000052728 6234 1.655 - - 0.937 - - - 0.718 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
39. agpat3 ENSDARG00000036549 1093 1.654 - - 0.936 - - 0.718 - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
40. erlin1 ENSDARG00000021991 5664 1.651 - 0.874 - - - - 0.777 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
41. med21 ENSDARG00000026839 1083 1.649 - - 0.905 - - - 0.744 - - mediator complex subunit 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2763]
42. SERBP1 SERBP1 9276 1.649 - - 0.847 - - - 0.802 - -
43. CABZ01087568.1 CABZ01087568.1 1487 1.648 - - 0.921 - - 0.727 - - -
44. nr2f5 ENSDARG00000033172 11808 1.644 - 0.859 - - - 0.785 - - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
45. rgs12b ENSDARG00000036774 5088 1.639 - 0.837 - - - - - 0.802 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
46. mri1 ENSDARG00000075754 2567 1.637 - - 0.927 - - - 0.710 - - methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
47. ubl3b ENSDARG00000021556 1210 1.637 - - 0.915 - - 0.722 - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
48. rnf121 ENSDARG00000060282 1809 1.635 - - 0.914 - - 0.721 - - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
49. cenpl ENSDARG00000038802 696 1.634 - 0.812 - - - - - 0.822 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
50. rbm39b ENSDARG00000041853 1421 1.633 - - 0.916 - - 0.717 - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
51. sdc4 ENSDARG00000059906 10105 1.632 - - 0.885 - - - 0.747 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
52. slc1a5 ENSDARG00000099186 7580 1.628 - 0.861 - - - - - 0.767 - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
53. RNF38 ENSDARG00000062055 3901 1.626 - - - 0.849 - - 0.777 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
54. irf2a ENSDARG00000007387 915 1.626 - - 0.915 0.711 - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
55. acadvl ENSDARG00000016687 5329 1.625 - - 0.915 - - - 0.710 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
56. pum1 ENSDARG00000099256 5017 1.621 - - 0.877 - - - - - 0.744 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
57. gpx4b ENSDARG00000076836 8085 1.62 - - - - - - 0.766 0.854 - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
58. ptbp3 ENSDARG00000043757 6760 1.615 - 0.852 - - - 0.763 - - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
59. wdr5 ENSDARG00000016903 4834 1.615 - 0.853 - - - - - - 0.762 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
60. ankrd13c ENSDARG00000103831 3593 1.613 - 0.840 - - - 0.773 - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
61. luc7l ENSDARG00000055903 3357 1.612 - - 0.895 - - - 0.717 - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
62. med19a ENSDARG00000037392, ENSDARG00000114246 2231 1.61 - - 0.909 - - - 0.701 - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
63. slc39a7 ENSDARG00000104451 6368 1.602 - - - - - - 0.816 0.786 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
64. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.598 - - 0.844 - - - 0.754 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
65. eif4h ENSDARG00000042252 6742 1.598 - - 0.839 - - - 0.759 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
66. ankhd1 ENSDARG00000077860 5510 1.594 - 0.866 - - - 0.728 - - - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
67. kdm5c ENSDARG00000006124 4389 1.59 - - 0.838 - - - 0.752 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
68. ppp2r2d ENSDARG00000102009 5710 1.59 - - 0.842 - - 0.748 - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
69. gins1 ENSDARG00000007624 1421 1.589 - - - - - 0.707 - 0.882 - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
70. rnf7 ENSDARG00000055524 3390 1.589 - 0.877 - - - - 0.712 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
71. MARK4 ENSDARG00000024966 3377 1.588 - - - - - - 0.706 0.882 - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
72. atf4b2 atf4b2 4734 1.586 - 0.856 - - - - 0.730 - -
73. ssbp4 ENSDARG00000056483 10196 1.586 - - 0.850 - - - 0.736 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
74. rab11ba ENSDARG00000041878 4651 1.584 - 0.849 - - - 0.735 - - - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
75. atp2b4 5891 1.583 - - 0.814 - - 0.769 - - - ATPase, Ca++ transporting, plasma membrane 4
76. rnf2 ENSDARG00000010381 3427 1.58 - 0.856 - - - - - - 0.724 ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
77. arl8a ENSDARG00000078686 4379 1.575 - 0.863 - - - 0.712 - - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
78. kansl1a ENSDARG00000090895 2593 1.574 - - - - - 0.728 - 0.846 - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
79. prr12a ENSDARG00000074229 1668 1.571 - 0.831 - - - - 0.740 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
80. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.571 - - - - - - 0.748 0.823 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
81. map1lc3b ENSDARG00000101127 3958 1.569 - 0.866 - - - - 0.703 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
82. ncor2 ENSDARG00000000966 3352 1.568 - 0.841 - - - - 0.727 - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
83. TBC1D4 ENSDARG00000075156 2503 1.567 - 0.864 - - - 0.703 - - - TBC1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9881]
84. u2af2b ENSDARG00000011740 6946 1.564 - - - - - 0.795 0.769 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
85. srrm1 ENSDARG00000001244 4972 1.559 - - - - - 0.805 0.754 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
86. csnk1db ENSDARG00000006125 2581 1.557 - - - - - 0.809 - 0.748 - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
87. gyg1a ENSDARG00000011934 2276 1.557 - 0.832 - - - - 0.725 - - glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
88. pcnp ENSDARG00000037713 2754 1.552 - - - - - - 0.736 0.816 - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
89. fat1 fat1 3934 1.552 - - 0.841 - - - 0.711 - -
90. anp32b ENSDARG00000023330 25013 1.55 - 0.781 - - - 0.769 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
91. snrpc ENSDARG00000009871 9567 1.55 - 0.831 - - - - 0.719 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
92. spopla ENSDARG00000010563 775 1.549 - - 0.824 - - 0.725 - - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
93. si:ch211-226m16.2 ENSDARG00000036785 2163 1.548 - - 0.747 - - - - 0.801 - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
94. nol11 ENSDARG00000026767 2528 1.548 - 0.831 - 0.717 - - - - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
95. tsn ENSDARG00000041830, ENSDARG00000111147 1268 1.547 - - - - - 0.731 - 0.816 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
96. lrp1b lrp1b 3216 1.545 - - 0.831 - - 0.714 - - -
97. lsm14ab ENSDARG00000100553 3837 1.537 - - - - - 0.774 0.763 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
98. drg1 ENSDARG00000039345 7545 1.537 - - 0.809 - - - 0.728 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
99. msi2b ENSDARG00000032614 3095 1.533 - - - - - - 0.767 0.766 - musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
100. ube2a ENSDARG00000098466 12765 1.533 - - - - - - 0.724 0.809 - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]

There are 1161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA