Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rnd3b

Gene Name Gene ID Reads Annotation
rnd3b ENSDARG00000007396 881 Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]










Genes with expression patterns similar to rnd3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnd3b ENSDARG00000007396 881 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
2. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.863 - 0.907 0.956 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
3. lhfp 700 1.826 - 0.896 0.930 - - - - - - lipoma HMGIC fusion partner
4. CT955984.1 ENSDARG00000113577 1482 1.795 0.995 - - - - - 0.800 - -
5. nrp1a ENSDARG00000102153 4154 1.792 0.969 - - - - - 0.823 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
6. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.751 - 0.865 0.886 - - - - - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
7. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.748 - - 0.943 - - - 0.805 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
8. supt6h ENSDARG00000006524 3221 1.747 0.992 - 0.755 - - - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
9. zgc:171497 ENSDARG00000100614 1040 1.744 - - 0.923 - - - 0.821 - - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
10. GID4 ENSDARG00000079482 1375 1.744 - 0.831 0.913 - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
11. psph ENSDARG00000040314 1359 1.738 0.988 0.750 - - - - - - - phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
12. lrrfip2 ENSDARG00000010400 2633 1.732 - 0.873 0.859 - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
13. smim7 ENSDARG00000074848 1260 1.728 - 0.802 0.926 - - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
14. trpm7 ENSDARG00000036232 925 1.704 - - 0.951 - - - 0.753 - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
15. ARHGEF17 ENSDARG00000101644 625 1.7 - 0.765 0.935 - - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
16. CLDN23 CLDN23 2002 1.696 - 0.878 0.818 - - - - - -
17. klf15 ENSDARG00000091127 1037 1.695 - 0.806 0.889 - - - - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
18. alas1 ENSDARG00000021059 4892 1.69 0.981 - - - - - 0.709 - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
19. anxa1b ENSDARG00000100095 7763 1.689 0.936 0.753 - - - - - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
20. tfap2c ENSDARG00000040606 4628 1.684 0.973 - 0.711 - - - - - - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
21. lyn ENSDARG00000067916, ENSDARG00000107511 109 1.678 - 0.876 - - - - 0.802 - - LYN proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040912-7]
22. wif1 ENSDARG00000005541 1689 1.676 - 0.874 0.802 - - - - - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
23. sox7 ENSDARG00000030125 806 1.676 - 0.830 - - - - 0.846 - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
24. pop5 ENSDARG00000053452 1347 1.655 - 0.871 - - - - 0.784 - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
25. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 1.646 - 0.902 - - - - 0.744 - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
26. hoxc11a ENSDARG00000070351 1783 1.646 - 0.813 0.833 - - - - - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
27. kif23 ENSDARG00000014943, ENSDARG00000116561 845 1.641 - 0.875 - - - - 0.766 - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
28. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 1.639 - 0.863 - - - - 0.776 - - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
29. fahd1 ENSDARG00000031657 521 1.61 - 0.869 - - - 0.741 - - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
30. tmem161b ENSDARG00000055989 680 1.609 - 0.812 - - - - 0.797 - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
31. bub1bb ENSDARG00000074927 1667 1.608 - 0.789 0.819 - - - - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
32. aggf1 ENSDARG00000060109 574 1.583 - 0.851 - - - - 0.732 - - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
33. cry1a cry1a 738 1.568 - 0.846 - - - - 0.722 - -
34. CABZ01080492.1 CABZ01080492.1 495 1.563 - 0.863 - - - - 0.700 - -
35. mdm4 ENSDARG00000057513 1954 1.555 - 0.708 0.847 - - - - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
36. ponzr1 ENSDARG00000090444 540 1.538 - - - - - 0.813 0.725 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
37. sgk1 ENSDARG00000025522, ENSDARG00000115600 1650 1.522 - - - - - 0.809 0.713 - - serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]
38. SLC16A13 ENSDARG00000055342 183 1.491 - 0.767 - - - 0.724 - - - solute carrier family 16, member 13 (monocarboxylic acid transporter 13) [Source:ZFIN;Acc:ZDB-GENE-120907-2]
39. pcdh10a ENSDARG00000099729 2214 1.483 - 0.730 - - - - 0.753 - - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
40. mal 906 1.472 - - - - - 0.754 0.718 - - mal, T-cell differentiation protein
41. psat1 ENSDARG00000016733 8084 1.471 - 0.752 0.719 - - - - - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
42. foxf1 ENSDARG00000015399 205 1.427 - - - - - 0.707 0.720 - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
43. adkb ENSDARG00000095947 990 0.998 0.998 - - - - - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
44. hmgcrb ENSDARG00000105206 2080 0.997 0.997 - - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
45. si:dkey-4c15.19 si:dkey-4c15.19 219 0.996 0.996 - - - - - - - -
46. gtf2a1 ENSDARG00000011000 2026 0.996 0.996 - - - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
47. sel1l ENSDARG00000004581 2246 0.996 0.996 - - - - - - - - SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
48. CDIP1 ENSDARG00000076118 1294 0.996 0.996 - - - - - - - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
49. rad50 ENSDARG00000038917 1105 0.996 0.996 - - - - - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
50. foxj1b ENSDARG00000088290 343 0.996 0.996 - - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
51. baz1a ENSDARG00000063233, ENSDARG00000099745 563 0.996 0.996 - - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
52. HAUS8 HAUS8 625 0.996 0.996 - - - - - - - -
53. nxf1 ENSDARG00000055076 3251 0.996 0.996 - - - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
54. sas sas 1783 0.996 0.996 - - - - - - - -
55. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 0.995 0.995 - - - - - - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
56. dync1li1 ENSDARG00000098317 729 0.995 0.995 - - - - - - - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
57. qpctla ENSDARG00000061691 869 0.995 0.995 - - - - - - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
58. stk25a ENSDARG00000002210 372 0.995 0.995 - - - - - - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
59. mpp7 mpp7 743 0.995 0.995 - - - - - - - -
60. ZNF385C ENSDARG00000058154 478 0.995 0.995 - - - - - - - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
61. mycla ENSDARG00000006003 1866 0.995 0.995 - - - - - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
62. dnttip2 ENSDARG00000057648 2381 0.995 0.995 - - - - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
63. ppm1k ENSDARG00000010655 1285 0.995 0.995 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
64. mpi ENSDARG00000030786 3052 0.995 0.995 - - - - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
65. dhrs7c dhrs7c 1173 0.995 0.995 - - - - - - - -
66. kat2a ENSDARG00000104734 802 0.995 0.995 - - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
67. sf3b4 ENSDARG00000018574 7470 0.995 0.995 - - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
68. cx35.4 ENSDARG00000042866 685 0.995 0.995 - - - - - - - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
69. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.994 0.994 - - - - - - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
70. FAM210B ENSDARG00000052638 1755 0.994 0.994 - - - - - - - - family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
71. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.994 0.994 - - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
72. ppapdc1b ppapdc1b 2866 0.994 0.994 - - - - - - - -
73. pon2 ENSDARG00000016856 1382 0.994 0.994 - - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
74. rab14 ENSDARG00000074246 4084 0.994 0.994 - - - - - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
75. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.994 0.994 - - - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
76. nrg1 ENSDARG00000104314 1081 0.994 0.994 - - - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
77. nktr ENSDARG00000059097 1998 0.994 0.994 - - - - - - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
78. dlgap5 ENSDARG00000045167, ENSDARG00000109645 1466 0.993 0.993 - - - - - - - - discs, large (Drosophila) homolog-associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-040912-160]
79. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.993 0.993 - - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
80. si:ch211-10d23.5 ENSDARG00000095510 2632 0.993 0.993 - - - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
81. csde1_1 ENSDARG00000074758 2759 0.993 0.993 - - - - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
82. C18H15orf39 C18H15orf39 1125 0.992 0.992 - - - - - - - -
83. hnrnpua ENSDARG00000015206 4012 0.992 0.992 - - - - - - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
84. apaf1 ENSDARG00000021239 1185 0.992 0.992 - - - - - - - - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
85. stxbp2 ENSDARG00000007603 1646 0.992 0.992 - - - - - - - - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
86. NUAK1_1 NUAK1_1 1782 0.992 0.992 - - - - - - - -
87. lin52 ENSDARG00000070833 2271 0.992 0.992 - - - - - - - - lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
88. dab2 ENSDARG00000031761 2000 0.992 0.992 - - - - - - - - Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040303-1]
89. ppm1la ENSDARG00000063218 2142 0.992 0.992 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
90. ppp1cc 2361 0.992 0.992 - - - - - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
91. zfand5b ENSDARG00000002271 4145 0.992 0.992 - - - - - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
92. knop1 ENSDARG00000077721 2198 0.991 0.991 - - - - - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
93. acsbg2 ENSDARG00000004094 2445 0.991 0.991 - - - - - - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
94. si:dkey-199f5.8 ENSDARG00000018853 3249 0.991 0.991 - - - - - - - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
95. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.991 0.991 - - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
96. grina grina 4656 0.991 0.991 - - - - - - - -
97. syf2 ENSDARG00000004706 2463 0.991 0.991 - - - - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
98. brd3b ENSDARG00000100129 6387 0.99 0.990 - - - - - - - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
99. sik2b ENSDARG00000062315 1303 0.99 0.990 - - - - - - - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
100. zgc:100919 zgc:100919 7746 0.99 0.990 - - - - - - - -

There are 1323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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