Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnd3a

Gene Name Gene ID Reads Annotation
rnd3a ENSDARG00000076799 4705 Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]










Genes with expression patterns similar to rnd3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnd3a ENSDARG00000076799 4705 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
2. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 3.168 0.765 0.719 - - - 0.833 - 0.851 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
3. snrpa ENSDARG00000018890 4593 2.457 - 0.732 - - 0.940 0.785 - - - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
4. arglu1a ENSDARG00000019223 8716 2.415 - 0.715 - - 0.961 0.739 - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
5. pl10 pl10 10795 2.335 - 0.780 - - 0.788 0.767 - - -
6. plcg1 ENSDARG00000038442 5324 2.3 - - 0.705 - - 0.731 - 0.864 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
7. dpy30 ENSDARG00000004427 7112 2.272 - - - 0.704 - 0.821 - - 0.747 dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
8. MRPL52 ENSDARG00000090568 4402 2.204 - 0.753 0.733 - - - - 0.718 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
9. nfya ENSDARG00000042004, ENSDARG00000114231 6606 2.191 - 0.758 - 0.712 - 0.721 - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
10. slc4a2b ENSDARG00000052330 1900 1.991 - - - - 0.992 - 0.999 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
11. CCNA2 ENSDARG00000011094 3996 1.928 - - - - 0.928 - 1.000 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
12. nudt3a ENSDARG00000016256 2713 1.875 - 0.889 - - 0.986 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
13. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.871 - - - - - - 1.000 0.871 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
14. dnttip2 ENSDARG00000057648 2381 1.841 - - - - 0.957 - - 0.884 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
15. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1.813 - 0.825 - - 0.988 - - - -
16. si:dkey-30k6.5 ENSDARG00000057238 617 1.813 - - - - 0.992 - - 0.821 - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
17. sgms1 ENSDARG00000029621 6376 1.802 - - - - 0.812 - 0.990 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
18. E2F6 E2F6 1271 1.8 - - - - 0.958 - - 0.842 -
19. ostc ENSDARG00000104901 16240 1.797 - - - - 0.804 - 0.993 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
20. ncl ENSDARG00000002710 16951 1.773 - 0.776 - - - - 0.997 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
21. cd248b ENSDARG00000077938 2561 1.772 - 0.785 - - 0.987 - - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
22. ryr1a ENSDARG00000011422 2377 1.765 - 0.766 - - - - 0.999 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
23. WDR61 ENSDARG00000007755 2827 1.765 - - - 0.787 0.978 - - - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
24. ttk ENSDARG00000041361 3911 1.762 - - - - 0.828 - - 0.934 - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
25. slc7a4 ENSDARG00000068286 1693 1.756 - - - - - 0.756 1.000 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
26. atp5h 18018 1.755 - 0.766 - - - - 0.989 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
27. vcl vcl 6667 1.754 - 0.757 - - - - 0.997 - -
28. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 1.75 - 0.751 - - - - 0.999 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
29. VPS37B_1 VPS37B_1 1816 1.729 - 0.739 - - 0.990 - - - -
30. CCDC71 CCDC71 2442 1.728 - - - - 0.979 0.749 - - -
31. iars2 ENSDARG00000044134 1990 1.727 - 0.741 - - 0.986 - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
32. aplnrb ENSDARG00000036670 546 1.727 - 0.820 - - - - - 0.907 - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
33. CR388095.3 CR388095.3 2548 1.719 - - - - - - 0.999 0.720 -
34. CABZ01059390.1 CABZ01059390.1 4340 1.718 - - - - 0.943 - - 0.775 -
35. pcif1 ENSDARG00000099084 2851 1.718 - - - - - 0.718 1.000 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
36. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.717 - 0.836 - - - - - 0.881 - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
37. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.716 - - - - 0.961 0.755 - - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
38. acbd6 ENSDARG00000039456 2355 1.713 - - - - 0.987 0.726 - - - acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
39. pim3 ENSDARG00000055129 1517 1.713 - - - - 0.991 - - - 0.722 Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
40. asap1a ENSDARG00000029463 1566 1.711 - 0.815 - - - - - 0.896 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
41. srcap ENSDARG00000005236 1740 1.708 0.722 - - - 0.986 - - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
42. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.707 - - - 0.838 - - - 0.869 - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
43. mllt10 ENSDARG00000045401 7557 1.706 - - - - 0.932 0.774 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
44. hcfc1b ENSDARG00000012519 3633 1.703 0.724 - - - 0.979 - - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
45. nfyba ENSDARG00000039185 1804 1.703 - - - - 0.966 - - 0.737 - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
46. si:ch211-51e12.7 ENSDARG00000045914 9598 1.702 - - - - - 0.704 0.998 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
47. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.699 - - 0.711 - 0.988 - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
48. ppm1la ENSDARG00000063218 2142 1.698 - 0.810 - - - - - 0.888 - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
49. snrpe ENSDARG00000033175 7462 1.697 - 0.714 - - 0.983 - - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
50. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.692 - - - - 0.975 - - 0.717 - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
51. pak2a ENSDARG00000068177 8931 1.673 - - 0.752 - 0.921 - - - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
52. nol12 ENSDARG00000038027 2288 1.668 - 0.713 - - 0.955 - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
53. C3H19orf43 C3H19orf43 2961 1.667 - 0.810 - - - - - 0.857 -
54. homer3 homer3 1974 1.657 - 0.786 - - - - - 0.871 -
55. prmt1 ENSDARG00000010246 11311 1.656 - 0.812 - - - - - 0.844 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
56. Mar-07 Mar-07 2926 1.647 - 0.810 - - - - - 0.837 -
57. med22 ENSDARG00000014148 1307 1.638 - - - 0.739 - - - 0.899 - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
58. ube3b ENSDARG00000061960 978 1.637 - - - - - 0.801 - 0.836 - ubiquitin protein ligase E3B [Source:ZFIN;Acc:ZDB-GENE-060526-231]
59. lrpprc ENSDARG00000043970 3847 1.622 - 0.828 - - - - - 0.794 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
60. bub1bb ENSDARG00000074927 1667 1.618 - - 0.717 - - - - 0.901 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
61. apex1 ENSDARG00000045843 6345 1.612 - 0.898 - - - 0.714 - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
62. dnajc11 1939 1.612 - 0.800 - - - - - 0.812 - DnaJ heat shock protein family (Hsp40) member C11
63. CSK ENSDARG00000067996 476 1.606 - - - - - 0.725 - 0.881 - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
64. ZNF576 ZNF576 1447 1.605 - - - 0.719 - - - 0.886 -
65. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.603 - 0.735 - - - - - 0.868 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
66. ipo7 ENSDARG00000035751 7095 1.6 - 0.787 - - 0.813 - - - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
67. NOP14 ENSDARG00000098859 1288 1.6 - 0.739 - - - - - 0.861 - NOP14 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9691]
68. smyd1b ENSDARG00000091253 4964 1.596 - 0.732 - - 0.864 - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
69. MYO1D ENSDARG00000036863 768 1.595 - - - 0.729 - - - 0.866 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
70. tnks tnks 1695 1.595 - - - - - 0.819 - 0.776 -
71. knop1 ENSDARG00000077721 2198 1.594 - 0.758 - - - - - 0.836 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
72. CABZ01073174.1 CABZ01073174.1 581 1.585 - - 0.715 - - - - 0.870 -
73. ssb ENSDARG00000029252 3394 1.585 - 0.818 - - - - - 0.767 - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
74. actr1 ENSDARG00000011611 3879 1.583 - 0.765 - - - - - 0.818 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
75. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.581 - 0.712 - - - - - 0.869 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
76. CASKIN2_1 CASKIN2_1 2299 1.579 - 0.759 - 0.820 - - - - -
77. taf7 ENSDARG00000019572 1305 1.578 - 0.741 - - - - - 0.837 - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
78. dip2c dip2c 248 1.576 - 0.720 - - - - - 0.856 -
79. CR388231.3 ENSDARG00000105601 2404 1.574 - - 0.722 - - - - 0.852 -
80. ssbp1 ENSDARG00000039350 809 1.574 - 0.712 - - - - - 0.862 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
81. plecb ENSDARG00000021987 13621 1.569 - 0.857 - - 0.712 - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
82. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 1.567 - - - - - 0.750 - 0.817 - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
83. rhot2 ENSDARG00000056328 1123 1.566 - - - 0.712 - - - 0.854 - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
84. pptc7b ENSDARG00000052658 1756 1.565 - - - - - 0.781 - 0.784 - PTC7 protein phosphatase homolog b [Source:ZFIN;Acc:ZDB-GENE-081105-111]
85. tmsb ENSDARG00000054911 6411 1.562 - 0.854 - - - 0.708 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
86. pik3r1 ENSDARG00000038524 3615 1.561 - - - 0.712 - - - 0.849 - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
87. arid2 ENSDARG00000007413 4413 1.56 - 0.747 - - - 0.813 - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
88. slc35d1a ENSDARG00000011973 670 1.56 - 0.721 - - - - - 0.839 - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1a [Source:ZFIN;Acc:ZDB-GENE-040826-5]
89. atf7ip ENSDARG00000069619 5495 1.559 - 0.741 - - - - - 0.818 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
90. sumo3a ENSDARG00000028119 13447 1.557 - - - 0.766 - 0.791 - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
91. gmps ENSDARG00000079848 8217 1.556 - - - - 0.855 - - 0.701 - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
92. dnajc5ga ENSDARG00000041896 1478 1.556 - 0.709 - - - - - 0.847 - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
93. kdm5c ENSDARG00000006124 4389 1.551 - - - - - 0.773 - - 0.778 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
94. tbca ENSDARG00000016754 6427 1.551 - 0.787 - 0.764 - - - - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
95. pelo ENSDARG00000055477 1927 1.549 - - 0.714 - - - - 0.835 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
96. rtca ENSDARG00000002215 3558 1.548 - 0.786 - - - 0.762 - - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
97. ap1s1 ENSDARG00000056803 3854 1.546 - - 0.758 - - - - 0.788 - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
98. bysl ENSDARG00000001057 2621 1.546 - 0.799 - - - - - 0.747 - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
99. ube2nb ENSDARG00000045877 4583 1.543 - 0.842 - 0.701 - - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
100. rtkn2 rtkn2 1092 1.539 - - - 0.821 - 0.718 - - -

There are 1864 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA