Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnaset2

Gene Name Gene ID Reads Annotation
rnaset2 ENSDARG00000036282 2226 ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]










Genes with expression patterns similar to rnaset2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnaset2 ENSDARG00000036282 2226 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]
2. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.663 - - - - - 0.826 0.837 - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
3. sec63 ENSDARG00000017740 3789 1.654 - 0.866 - - - - 0.788 - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
4. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 1.653 0.807 - - - - 0.846 - - - bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
5. CARD14 ENSDARG00000103485 888 1.56 - - - - - 0.786 0.774 - - caspase recruitment domain family, member 14 [Source:ZFIN;Acc:ZDB-GENE-090310-1]
6. tmem2 2572 1.552 - 0.761 - - - 0.791 - - - transmembrane protein 2, transcript variant X1
7. fam89a ENSDARG00000079979 4375 1.551 - - - - - 0.799 0.752 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
8. cyfip1 ENSDARG00000044345 5483 1.545 - 0.745 - - - - 0.800 - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
9. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 1.543 - 0.731 - - - 0.812 - - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
10. axin2 ENSDARG00000100149 4223 1.527 - 0.778 - - - - 0.749 - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
11. pof1b ENSDARG00000054060 2355 1.522 - - - - - 0.815 0.707 - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
12. spint1a ENSDARG00000102332 1930 1.495 0.790 - - - - 0.705 - - - serine peptidase inhibitor, Kunitz type 1 a [Source:ZFIN;Acc:ZDB-GENE-040426-2169]
13. aanat1 ENSDARG00000036567 176 1.492 0.762 - - - - 0.730 - - - arylalkylamine N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040329-1]
14. zgc:158263 ENSDARG00000037267 516 1.492 - - - - - 0.755 0.737 - - zgc:158263 [Source:ZFIN;Acc:ZDB-GENE-070112-2262]
15. TCEB3 2429 1.49 - 0.741 - - - - 0.749 - - transcription elongation factor B (SIII), polypeptide 3
16. trim71 ENSDARG00000075593 2750 1.489 - 0.706 - - - 0.783 - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
17. ENSDARG00000058760 ENSDARG00000058760 1076 1.487 - 0.749 - - - - 0.738 - -
18. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.482 - - - - - 0.714 0.768 - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
19. TMEM185A TMEM185A 5505 1.478 - 0.749 - - - 0.729 - - -
20. cnn3a ENSDARG00000099510 6063 1.476 - 0.743 - - - - 0.733 - - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
21. gata6 ENSDARG00000103589 746 1.47 0.712 - - - - - 0.758 - - GATA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-000622-1]
22. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.466 - 0.734 - - - 0.732 - - - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
23. fkbp9 ENSDARG00000005023 17518 1.465 - 0.755 - - - 0.710 - - - FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
24. rac1 rac1 7341 1.464 - 0.735 - - - 0.729 - - -
25. gorasp2 ENSDARG00000015126 3923 1.463 - - - - - 0.735 0.728 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
26. dennd5b ENSDARG00000003789 1152 1.46 - 0.736 - - - 0.724 - - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
27. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 1.458 0.730 - - - - - 0.728 - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
28. CLEC19A ENSDARG00000113127, ENSDARG00000115545 486 1.458 0.752 - - - - - 0.706 - - C-type lectin domain containing 19A [Source:ZFIN;Acc:ZDB-GENE-080917-46]
29. CC2D1A 1262 1.457 - 0.727 - - - - 0.730 - - coiled-coil and C2 domain containing 1A, transcript variant X2
30. dnpep ENSDARG00000022599, ENSDARG00000111999 913 1.457 - 0.715 - - - 0.742 - - - aspartyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-040426-852]
31. anxa11a ENSDARG00000077383 4076 1.453 - 0.728 - - - 0.725 - - - annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
32. sdc4 ENSDARG00000059906 10105 1.449 - 0.734 - - - - 0.715 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
33. pnkd ENSDARG00000071032 447 1.427 - 0.720 - - - 0.707 - - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
34. si:dkeyp-1h4.9 si:dkeyp-1h4.9 189 1.421 - 0.713 - - - - 0.708 - -
35. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 0.895 - 0.895 - - - - - - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
36. chl1a ENSDARG00000077881 1488 0.89 - - - - - 0.890 - - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
37. si:dkey-193c22.2 ENSDARG00000076735 2791 0.879 - - - - - 0.879 - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
38. fam102aa ENSDARG00000102566 903 0.878 - 0.878 - - - - - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
39. aup1 ENSDARG00000092609 2431 0.877 - - - - - - 0.877 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
40. ctnnb1 ENSDARG00000014571 12004 0.862 - 0.862 - - - - - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
41. cblb ENSDARG00000015199, ENSDARG00000116429 1129 0.86 - - - - - 0.860 - - - Cbl proto-oncogene B, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-417]
42. mtpn ENSDARG00000104018 4264 0.86 - - - - - - 0.860 - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
43. crp4 714 0.859 - - - - - 0.859 - - - C-reactive protein 4
44. agrn ENSDARG00000079388, ENSDARG00000110127 5806 0.859 - - - - - 0.859 - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
45. mcf2la ENSDARG00000075859 882 0.855 - - - - - 0.855 - - - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
46. ATG4D ATG4D 648 0.855 - - - - - 0.855 - - -
47. plk3 ENSDARG00000038754 1687 0.854 - 0.854 - - - - - - - polo-like kinase 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6134]
48. mllt10 ENSDARG00000045401 7557 0.853 - 0.853 - - - - - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
49. BX004880.1 BX004880.1 638 0.853 - - - - - 0.853 - - -
50. si:ch211-191i18.2 ENSDARG00000070141 1164 0.853 0.853 - - - - - - - - si:ch211-191i18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-769]
51. hipk2 ENSDARG00000042518, ENSDARG00000111166 3099 0.852 - 0.852 - - - - - - - homeodomain interacting protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031125-4]
52. thrab ENSDARG00000052654 315 0.852 - - - - - 0.852 - - - thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]
53. actn1 ENSDARG00000007219 2919 0.851 - 0.851 - - - - - - - actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
54. pgd ENSDARG00000015343, ENSDARG00000117150 2512 0.85 - - - - - - 0.850 - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
55. WIPF2 WIPF2 3171 0.849 - - - - - 0.849 - - -
56. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.848 - - - - - - 0.848 - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
57. adamtsl7 ENSDARG00000055439 575 0.848 - - - - - 0.848 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
58. si:ch211-250c4.3 si:ch211-250c4.3 677 0.847 - - - - - 0.847 - - -
59. CABZ01088149.1 ENSDARG00000114019 530 0.846 0.846 - - - - - - - - mitochondrial ubiquitin ligase activator of nfkb 1-A [Source:NCBI gene;Acc:402879]
60. aktip ENSDARG00000026862, ENSDARG00000115058 2775 0.843 - - - - - - 0.843 - - akt interacting protein [Source:ZFIN;Acc:ZDB-GENE-030909-5]
61. ptbp1a ENSDARG00000019362 6290 0.843 - 0.843 - - - - - - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
62. si:ch211-226m16.2 ENSDARG00000036785 2163 0.843 - - - - - - 0.843 - - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
63. wnk1b ENSDARG00000039392 3587 0.842 - - - - - 0.842 - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
64. DYNC1I2 DYNC1I2 4131 0.84 - 0.840 - - - - - - -
65. cald1l cald1l 4115 0.839 - - - - - - 0.839 - -
66. ZDHHC3 ZDHHC3 1208 0.839 - - - - - - 0.839 - -
67. ptenb ENSDARG00000056623 5783 0.838 - 0.838 - - - - - - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
68. CR388068.1 CR388068.1 481 0.835 - - - - - 0.835 - - -
69. ndufv3 ENSDARG00000090389 4829 0.834 - - - - - - 0.834 - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
70. zmat5 ENSDARG00000035434 983 0.834 - - - - - - 0.834 - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
71. si:dkey-19h16.2 si:dkey-19h16.2 1077 0.834 - - - - - 0.834 - - -
72. taok3a ENSDARG00000060751 254 0.833 0.833 - - - - - - - - TAO kinase 3a [Source:ZFIN;Acc:ZDB-GENE-100921-50]
73. srsf9 ENSDARG00000008097 2405 0.83 - 0.830 - - - - - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
74. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.83 - - - - - 0.830 - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
75. exoc5 ENSDARG00000060323 2450 0.828 - - - - - 0.828 - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
76. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 0.827 - - - - - 0.827 - - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
77. mogat3b ENSDARG00000003635 394 0.825 0.825 - - - - - - - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
78. CABZ01038494.1 ENSDARG00000088258 908 0.825 - - - - - 0.825 - - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
79. NIPAL4 ENSDARG00000059365 597 0.825 0.825 - - - - - - - - NIPA like domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-412]
80. tuba1b ENSDARG00000045367 8485 0.824 - 0.824 - - - - - - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
81. tpcn2 ENSDARG00000100420 626 0.824 - - - - - 0.824 - - - two pore segment channel 2 [Source:ZFIN;Acc:ZDB-GENE-061103-202]
82. abca12 ENSDARG00000074749 2712 0.824 - - - - - 0.824 - - - ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
83. nanp ENSDARG00000075143, ENSDARG00000114467 328 0.824 - - - - - 0.824 - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
84. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 0.823 - - - - - 0.823 - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
85. pi4k2b ENSDARG00000013881 1337 0.822 - - - - - 0.822 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
86. TTL ENSDARG00000062418 3043 0.822 - 0.822 - - - - - - - tubulin tyrosine ligase [Source:ZFIN;Acc:ZDB-GENE-060929-608]
87. fstl1a ENSDARG00000015559 1687 0.822 - - - - - 0.822 - - - follistatin-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4148]
88. dpp4 ENSDARG00000079420 1286 0.821 0.821 - - - - - - - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
89. cplx4b ENSDARG00000059486 3192 0.821 - 0.821 - - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
90. CREBZF ENSDARG00000089787 4261 0.821 - 0.821 - - - - - - - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
91. asna1 ENSDARG00000018190 5253 0.821 - - - - - 0.821 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
92. suv420h2 2186 0.82 - - - - - - 0.820 - - suppressor of variegation 4-20 homolog 2 (Drosophila)
93. slc35d2 ENSDARG00000089837 1606 0.819 - 0.819 - - - - - - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
94. anxa2a ENSDARG00000003216 10684 0.819 - 0.819 - - - - - - - annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
95. clpxa ENSDARG00000029063 1188 0.818 - - - - - - 0.818 - - caseinolytic mitochondrial matrix peptidase chaperone subunit a [Source:ZFIN;Acc:ZDB-GENE-040912-143]
96. hivep3b ENSDARG00000037154 114 0.818 - - - - - 0.818 - - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
97. ACTL7B ACTL7B 1219 0.818 - 0.818 - - - - - - -
98. epn2 ENSDARG00000008377 5458 0.818 - - - - - - 0.818 - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
99. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 0.817 - - - - - 0.817 - - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
100. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 0.817 - 0.817 - - - - - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]

There are 729 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA