Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnasen

Gene Name Gene ID Reads Annotation
rnasen ENSDARG00000055563 609 ribonuclease type III, nuclear [Source:ZFIN;Acc:ZDB-GENE-070209-23]










Genes with expression patterns similar to rnasen

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnasen ENSDARG00000055563 609 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease type III, nuclear [Source:ZFIN;Acc:ZDB-GENE-070209-23]
2. zgc:110269 ENSDARG00000012325 691 1.712 - - - - - - - 0.828 0.884 zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
3. spata6l ENSDARG00000004874 149 1.676 - 0.768 - - - - - - 0.908 spermatogenesis associated 6-like [Source:ZFIN;Acc:ZDB-GENE-040426-1369]
4. CABZ01038313.1 CABZ01038313.1 79 1.668 - - - - - 0.796 - - 0.872
5. ldlr ldlr 35 1.657 - - - - - - 0.766 - 0.891
6. sult2st3 ENSDARG00000028367 79 1.649 - 0.774 - - - - - - 0.875 sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
7. SLC36A4 ENSDARG00000039661 175 1.634 - - - - - 0.776 - - 0.858 solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
8. si:ch211-89f7.1 si:ch211-89f7.1 699 1.631 - 0.758 - - - - - - 0.873
9. si:ch211-229b6.1 ENSDARG00000093422 151 1.625 - - - - - - - 0.764 0.861 si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
10. hoxa13a ENSDARG00000100312 543 1.619 - 0.741 - - - - - - 0.878 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
11. actr10 ENSDARG00000038432 1598 1.586 - 0.753 - - - 0.833 - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
12. dixdc1a ENSDARG00000025302 716 1.584 - - - - - 0.827 - - 0.757 DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
13. pex16 ENSDARG00000058202 486 1.581 - - - - - 0.703 - - 0.878 peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
14. si:dkey-121j17.6 ENSDARG00000069661 456 1.578 - - - - - - - 0.791 0.787 si:dkey-121j17.6 [Source:ZFIN;Acc:ZDB-GENE-121214-361]
15. CR352229.2 CR352229.2 784 1.572 - 0.707 - - - - - - 0.865
16. si:rp71-1i20.2 ENSDARG00000043198 113 1.56 - 0.721 - - - - - - 0.839 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
17. hs3st3l ENSDARG00000059903 184 1.559 - - - - - 0.799 - 0.760 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
18. skilb ENSDARG00000022904 300 1.548 - - - - - - 0.782 - 0.766 SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
19. hsp70l_1 ENSDARG00000055723 72 1.548 - - - - - 0.705 - - 0.843 heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
20. kctd9 kctd9 973 1.537 - 0.734 - - - - 0.803 - -
21. ppp2r2ba 321 1.531 - - - - - 0.789 - 0.742 - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
22. USO1 ENSDARG00000019581 1617 1.526 - - - - - 0.722 - - 0.804 USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
23. styk1 1199 1.524 - - - - - - - 0.712 0.812 serine/threonine/tyrosine kinase 1
24. rdh12 ENSDARG00000018069 396 1.523 - - - - - 0.747 - - 0.776 retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
25. st18 663 1.522 0.796 - - - - 0.726 - - - suppression of tumorigenicity 18, zinc finger
26. sppl2 ENSDARG00000030448 1040 1.522 - - - - - 0.754 0.768 - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
27. lamb2l ENSDARG00000033950 952 1.521 - 0.708 - - - - - - 0.813 laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
28. chst13 chst13 669 1.521 - - - - - 0.789 - - 0.732
29. fbxw4 ENSDARG00000033551 645 1.52 - - - - - 0.714 - - 0.806 F-box and WD repeat domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-000516-1]
30. aldh3a2a ENSDARG00000028259 591 1.519 - - - - - - - 0.716 0.803 aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
31. ric8a ENSDARG00000007247 229 1.517 - - - - - 0.767 - 0.750 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
32. esm1 ENSDARG00000104370 186 1.515 0.717 - - - - 0.798 - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
33. ptpn9b ENSDARG00000073902 755 1.51 - - - - - 0.799 - 0.711 - protein tyrosine phosphatase, non-receptor type 9, b [Source:ZFIN;Acc:ZDB-GENE-090313-52]
34. ENSDARG00000086878 ENSDARG00000086878 332 1.507 - - - - - 0.758 - 0.749 -
35. C9H2orf76 C9H2orf76 559 1.502 - - - - - - - 0.757 0.745
36. PEG3 PEG3 644 1.501 0.788 - - - - - - 0.713 -
37. phf2 ENSDARG00000018691 3341 1.499 - 0.710 - - - 0.789 - - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
38. mbd1 mbd1 1309 1.498 - 0.750 - 0.748 - - - - -
39. atpv0e2 ENSDARG00000059057 585 1.495 - - - - - 0.787 - 0.708 - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
40. chrnb2b ENSDARG00000017790 155 1.494 - 0.710 - - - 0.784 - - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
41. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.493 - 0.767 - - - - - - 0.726 family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
42. alox5 alox5 406 1.491 - 0.791 - - - - - 0.700 -
43. CDKN2AIP ENSDARG00000035853 341 1.483 - 0.703 - - - - - - 0.780 CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
44. CABZ01063556.1 ENSDARG00000116344 319 1.483 - - - - - - 0.750 0.733 - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
45. zdhhc14 ENSDARG00000037069 479 1.481 - - - - - 0.745 0.736 - - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
46. dnal4b ENSDARG00000088841, ENSDARG00000112852, ENSDARG00000113376 303 1.475 - 0.730 - - - - 0.745 - - dynein, axonemal, light chain 4b [Source:ZFIN;Acc:ZDB-GENE-050208-510]
47. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.475 - - - - - 0.758 - 0.717 - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
48. thsd7ba ENSDARG00000095022 231 1.472 - - - - - 0.771 - 0.701 - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
49. slc25a21 ENSDARG00000060564 344 1.471 - - - - - 0.734 - 0.737 - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
50. AL929115.2 AL929115.2 952 1.467 0.736 - - - - 0.731 - - -
51. sb:cb252 sb:cb252 2480 1.463 - 0.716 - - - - - 0.747 -
52. ppp1r3da ENSDARG00000077513 109 1.463 - 0.726 - - - - - 0.737 - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
53. tctex1d1 ENSDARG00000103545 409 1.459 - - - - - - - 0.711 0.748 Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
54. RILP ENSDARG00000074660 249 1.458 - - - - - 0.756 - - 0.702 Rab interacting lysosomal protein [Source:ZFIN;Acc:ZDB-GENE-100408-4]
55. si:ch211-207e7.1 si:ch211-207e7.1 33 1.451 - 0.702 - - - - - - 0.749
56. DSCAML1 ENSDARG00000098057 321 1.449 - 0.703 - - - 0.746 - - - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
57. tubgcp2 ENSDARG00000013079 1520 1.449 - 0.720 - - - 0.729 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
58. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.446 - - - - - 0.744 0.702 - - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
59. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.445 0.732 - - - - 0.713 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
60. setd3 ENSDARG00000016513 1507 1.442 - - - - - 0.707 - - 0.735 SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
61. si:ch211-210c8.6 ENSDARG00000017811 908 1.426 - - - - - - - 0.720 0.706 si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
62. E2F3 ENSDARG00000070463 799 1.424 - 0.721 - - - 0.703 - - - E2F transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-070112-882]
63. dhx38 ENSDARG00000100013 1854 1.42 - - - - - 0.712 - 0.708 - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
64. phgdh ENSDARG00000001873 8325 1.417 - - - - - 0.701 - - 0.716 phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
65. thbs4a ENSDARG00000102777 625 0.93 - - - - - - - - 0.930 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
66. BX649554.3_1 BX649554.3_1 1071 0.925 - - - - - - - - 0.925
67. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 0.921 - - - - - - - - 0.921 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
68. SORCS2 ENSDARG00000077465 185 0.912 - - - - - - - - 0.912 sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
69. atp2c1 ENSDARG00000060197 273 0.911 - - - - - - - - 0.911 ATPase secretory pathway Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-060503-615]
70. BX890577.1 BX890577.1 257 0.909 - - - - - - - - 0.909
71. si:ch211-241e1.5 ENSDARG00000008906 70 0.908 - - - - - 0.908 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
72. dnajb13 ENSDARG00000043157 50 0.907 - - - - - - - - 0.907 DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
73. mafg2 mafg2 1041 0.907 - - - - - 0.907 - - -
74. arl15a ENSDARG00000076040, ENSDARG00000114295 41 0.906 - - - - - - - - 0.906 ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
75. dnah5 ENSDARG00000087373 168 0.905 - - - - - - - - 0.905 dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
76. ADAMTSL3 ENSDARG00000027903 278 0.904 - - - - - - - - 0.904 ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
77. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.904 - - - - - - - - 0.904 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
78. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 0.904 - 0.904 - - - - - - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
79. si:ch211-76l23.5 si:ch211-76l23.5 26 0.9 - - - - - - - - 0.900
80. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 0.9 - - - - - - - - 0.900 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
81. C1H7orf26 C1H7orf26 232 0.899 - - - - - - 0.899 - -
82. ribc1 ENSDARG00000055739 32 0.899 - - - - - - - - 0.899 RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
83. si:dkey-238o14.6 si:dkey-238o14.6 42 0.899 - - - - - - - - 0.899
84. si:ch211-202h22.10 ENSDARG00000087290 13 0.898 - - - - - - - - 0.898 si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
85. C5H9orf171 C5H9orf171 34 0.898 - - - - - - - - 0.898
86. CRHR2 ENSDARG00000092918, ENSDARG00000103704 12 0.898 - - - - - - - - 0.898 corticotropin releasing hormone receptor 2 [Source:NCBI gene;Acc:100002312]
87. zgc:165481 ENSDARG00000060092 95 0.898 - - - - - - - - 0.898 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
88. gpr126 gpr126 51 0.897 - - - - - - - - 0.897
89. arl10 37 0.896 - - - - - - - - 0.896 ADP-ribosylation factor-like 10
90. URB1 ENSDARG00000060308 78 0.895 - - - - - - - - 0.895 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
91. ccdc106 ccdc106 101 0.895 - - - - - - - - 0.895
92. ccdc169 ENSDARG00000089570 101 0.894 - - - - - - - - 0.894 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
93. KIF21B ENSDARG00000009733 53 0.893 - - - - - - - - 0.893 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
94. stx11a ENSDARG00000044039 39 0.892 - - - - - - - - 0.892 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
95. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 0.892 - - - - - - - - 0.892 carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
96. RUFY1 ENSDARG00000078685 114 0.892 - - - - - - - - 0.892 RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
97. hmgcs1 ENSDARG00000103025 231 0.89 - - - - - - - - 0.890 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1042]
98. CABZ01077217.1_1 ENSDARG00000079145 184 0.89 - - - - - - - - 0.890 uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
99. QPCT ENSDARG00000089717 1383 0.889 - - - - - - - - 0.889 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
100. klhl23 ENSDARG00000078475 92 0.889 - - - - - - - - 0.889 kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]

There are 1541 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA