Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnasel3

Gene Name Gene ID Reads Annotation
rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]










Genes with expression patterns similar to rnasel3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
2. fgb ENSDARG00000008969 11737 6.094 - 0.863 0.930 0.864 0.769 0.986 - 0.852 0.830 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
3. apoea ENSDARG00000102004 13212 5.704 0.846 - 0.838 0.732 0.730 0.950 - 0.759 0.849 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
4. pla2g12b ENSDARG00000015662 27239 5.184 - - 0.836 0.867 0.810 0.977 - 0.843 0.851 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
5. apoeb ENSDARG00000040295 229165 5.089 - - 0.791 0.855 0.774 0.975 - 0.880 0.814 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
6. apom ENSDARG00000076838 4732 5.046 - - 0.882 0.756 0.715 0.976 - 0.878 0.839 apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
7. apobb apobb 258472 5.014 - - 0.874 0.791 0.814 0.899 - 0.826 0.810
8. plg ENSDARG00000023111 2429 4.998 - - 0.861 0.824 0.712 0.953 - 0.813 0.835 plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
9. CFI 3801 4.962 0.732 - 0.895 0.848 - 0.947 - 0.819 0.721 complement factor I
10. apoa1b ENSDARG00000101324 336817 4.936 - - 0.837 0.759 0.819 0.926 - 0.767 0.828 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
11. dgat2 ENSDARG00000018846 5032 4.904 0.779 - 0.878 0.780 - 0.898 - 0.735 0.834 diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
12. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 4.904 0.811 - 0.728 0.764 - 0.984 - 0.738 0.879 carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
13. fga ENSDARG00000020741 5580 4.901 - - 0.842 0.779 0.703 0.993 - 0.802 0.782 fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
14. apoa2 ENSDARG00000015866 297380 4.898 - - 0.864 0.704 0.776 0.965 - 0.813 0.776 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
15. zgc:161979_1 zgc:161979_1 206500 4.894 - - 0.762 0.817 0.767 0.946 - 0.888 0.714
16. CD68 CD68 4599 4.869 - - 0.796 0.787 0.862 0.915 - 0.746 0.763
17. APOA4_1 APOA4_1 3645 4.846 - - 0.794 0.843 0.720 0.743 - 0.885 0.861
18. nt5c3a ENSDARG00000058597 14299 4.8 0.762 - 0.804 0.784 0.748 0.934 - 0.768 - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
19. fgg ENSDARG00000037281, ENSDARG00000114705 10817 4.797 - - 0.836 0.768 0.769 0.789 - 0.803 0.832 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
20. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 4.789 - - 0.883 0.728 0.708 0.955 - 0.705 0.810 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
21. slc25a20 ENSDARG00000040401 9258 4.772 0.844 - 0.735 0.737 - 0.939 - 0.814 0.703 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
22. prkacba ENSDARG00000001782 1340 4.706 - - 0.753 0.742 0.706 0.853 0.916 0.736 - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
23. sord ENSDARG00000053405 2406 4.677 - - 0.771 0.728 0.757 0.790 - 0.772 0.859 sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
24. TM6SF2 ENSDARG00000029057 1239 4.467 - - 0.892 0.704 0.716 0.732 - 0.715 0.708 transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
25. CNDP1 CNDP1 6456 4.377 0.882 - 0.894 - 0.810 0.962 - 0.829 -
26. sb:cb37 ENSDARG00000041645 2018 4.328 - - 0.880 0.719 - 0.991 - 0.886 0.852 sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
27. grhprb ENSDARG00000019986, ENSDARG00000109547 3233 4.317 - - 0.918 0.829 - 0.966 - 0.820 0.784 glyoxylate reductase/hydroxypyruvate reductase b [Source:ZFIN;Acc:ZDB-GENE-040426-1847]
28. ctsba ENSDARG00000055120 18732 4.312 - - 0.899 0.801 0.743 0.951 0.918 - - cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
29. zgc:136410 ENSDARG00000102241 8433 4.276 - - 0.780 0.863 - 0.968 - 0.768 0.897 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
30. apoa4 apoa4 84813 4.261 - - 0.878 - 0.787 0.921 - 0.847 0.828
31. rbp4 ENSDARG00000101199 59390 4.211 - - 0.850 0.877 0.787 0.940 - 0.757 - retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
32. APOB APOB 33858 4.207 - - 0.788 0.827 0.748 0.957 - 0.887 -
33. tfa ENSDARG00000016771 30517 4.168 - - 0.891 0.794 - 0.952 - 0.733 0.798 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
34. vtnb ENSDARG00000053831 2364 4.153 0.859 - 0.772 0.790 - 0.970 - - 0.762 vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
35. APOB_1 APOB_1 2217 4.15 - - 0.874 0.709 - 0.961 - 0.863 0.743
36. hao1 ENSDARG00000024160 6104 4.141 - - 0.837 0.811 0.808 - - 0.816 0.869 hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
37. f2 ENSDARG00000036041 3129 4.107 - - 0.860 0.707 - 0.971 - 0.803 0.766 coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
38. pvalb9 ENSDARG00000071601, ENSDARG00000113946 30137 4.103 - - 0.862 0.806 0.773 - - 0.802 0.860 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
39. creb3l3 creb3l3 1981 4.061 - - - 0.783 0.784 0.907 - 0.817 0.770
40. ctsh ENSDARG00000041108 2873 4.024 - - 0.746 0.795 0.722 0.910 - 0.851 - cathepsin H [Source:ZFIN;Acc:ZDB-GENE-030131-3539]
41. dmgdh ENSDARG00000025703 6088 3.994 - - 0.900 0.731 0.810 - - 0.783 0.770 dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
42. gpd1b ENSDARG00000043180 6002 3.983 - - 0.855 - 0.745 0.857 - 0.817 0.709 glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
43. fahd2a ENSDARG00000103759 9581 3.969 0.774 - 0.874 - 0.789 - - 0.770 0.762 fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
44. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 3.946 - - 0.779 0.707 - 0.834 - 0.804 0.822 kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
45. CLEC4A CLEC4A 1016 3.942 - - 0.807 - 0.759 0.730 - 0.862 0.784
46. suclg2 ENSDARG00000044914 7950 3.917 - - 0.773 - 0.768 0.829 - 0.766 0.781 succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
47. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 3.855 - - 0.728 0.749 0.725 0.908 - - 0.745 sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
48. pgm1 ENSDARG00000013561 11984 3.807 0.872 - - 0.745 0.702 - - 0.756 0.732 phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
49. serpinc1 ENSDARG00000042684, ENSDARG00000110644, ENSDARG00000114606 1045 3.768 - - 0.742 0.786 - 0.723 - 0.813 0.704 serpin peptidase inhibitor, clade C (antithrombin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-264]
50. slc25a25a ENSDARG00000010572 1240 3.745 - - 0.833 0.734 - 0.730 - 0.719 0.729 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a [Source:ZFIN;Acc:ZDB-GENE-040426-2396]
51. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 3.732 - - 0.789 0.751 0.722 0.715 - 0.755 - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
52. apoc2 ENSDARG00000092155 38149 3.503 - - 0.911 - 0.822 0.936 - 0.834 - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
53. vtna ENSDARG00000055388 2635 3.492 - - - 0.780 - 0.928 - 0.927 0.857 vitronectin a [Source:ZFIN;Acc:ZDB-GENE-050522-440]
54. cfb ENSDARG00000055278, ENSDARG00000110358 1725 3.48 - - - 0.824 - 0.918 - 0.846 0.892 complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
55. sardh ENSDARG00000058102, ENSDARG00000112110 2150 3.454 - - 0.829 - - 0.937 - 0.837 0.851 sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
56. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 3.454 - - 0.796 - 0.820 0.982 - 0.856 - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
57. rpia ENSDARG00000056640, ENSDARG00000110576 8288 3.4 - - 0.898 - 0.784 0.887 - 0.831 - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
58. psap ENSDARG00000013968 22919 3.392 0.921 - 0.819 0.749 - 0.903 - - - prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
59. serpina1l ENSDARG00000090850 10625 3.381 - - 0.870 0.789 - 0.913 - - 0.809 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
60. zgc:161979 zgc:161979 196746 3.337 - - - - 0.799 0.905 - 0.845 0.788
61. abca1b ENSDARG00000079009 14119 3.337 - - 0.897 0.780 - 0.937 - - 0.723 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
62. sepp1a 41994 3.314 0.749 - 0.808 - - 0.920 - 0.837 - selenoprotein P, plasma, 1a
63. ftcd ENSDARG00000007421 2228 3.314 - - - - 0.729 0.884 - 0.873 0.828 formimidoyltransferase cyclodeaminase [Source:ZFIN;Acc:ZDB-GENE-030131-9643]
64. cry3_1 cry3_1 3347 3.313 - - 0.905 0.721 - 0.945 - - 0.742
65. sepp1b 1004 3.285 - - 0.828 - 0.706 0.926 - 0.825 - selenoprotein P, plasma, 1b
66. ctsla ENSDARG00000007836 67814 3.267 - - - - 0.772 0.955 - 0.752 0.788 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
67. cyp2aa8 ENSDARG00000104540 2947 3.266 - - - 0.823 - 0.914 - 0.709 0.820 cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
68. glula ENSDARG00000099776 14156 3.25 - - - 0.836 0.794 - - 0.795 0.825 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
69. MPC2 ENSDARG00000024478 4194 3.246 - - 0.761 0.808 - 0.917 - - 0.760 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
70. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 3.239 - - 0.780 0.779 0.761 0.919 - - - phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
71. serping1 ENSDARG00000058053 1344 3.229 - - 0.779 0.734 - 0.905 - - 0.811 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1262]
72. C20H6orf58 C20H6orf58 1105 3.218 - - - 0.707 - 0.913 - 0.798 0.800
73. aqp12 ENSDARG00000043279 1881 3.217 - - 0.832 0.741 - 0.872 - 0.772 - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
74. fabp1b.1 ENSDARG00000059227 5670 3.213 - - - 0.802 - 0.893 - 0.738 0.780 fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
75. znrf2a ENSDARG00000077855 1845 3.206 - - 0.744 0.852 0.809 0.801 - - - zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
76. gart ENSDARG00000101089 6062 3.201 - - 0.822 0.771 - 0.896 - - 0.712 phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
77. f7 ENSDARG00000034862 405 3.192 - - 0.783 - - 0.855 - 0.771 0.783 coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
78. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 3.19 - - 0.797 - - 0.938 - 0.702 0.753 spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
79. itih2 ENSDARG00000045516 1893 3.184 0.937 - 0.721 - - 0.774 - 0.752 - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
80. sid4 sid4 1358 3.183 - - 0.805 0.754 0.751 0.873 - - -
81. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 3.165 - - 0.896 - 0.806 0.720 - - 0.743 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
82. c3a c3a 6690 3.158 - - 0.859 0.795 0.798 - - 0.706 -
83. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 3.143 - - 0.766 - 0.738 0.926 - - 0.713 regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
84. cp ENSDARG00000010312 1245 3.106 0.828 - - 0.708 - 0.759 - 0.811 - ceruloplasmin [Source:ZFIN;Acc:ZDB-GENE-010522-1]
85. CPN2 CPN2 682 3.1 - - 0.704 - - 0.934 - 0.737 0.725
86. nr0b2a ENSDARG00000044685 2508 3.091 - - 0.838 0.741 0.748 - - - 0.764 nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
87. hoga1 ENSDARG00000018944 800 3.072 - - 0.739 - - 0.889 - 0.729 0.715 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
88. cask cask 3384 3.069 - - - 0.762 - 0.822 - 0.740 0.745
89. txn ENSDARG00000044125, ENSDARG00000116040 4758 3.067 - - 0.701 0.766 0.758 0.842 - - - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
90. sat1a.1 ENSDARG00000035652 2941 3.063 - - 0.771 - - 0.826 - 0.762 0.704 spermidine/spermine N1-acetyltransferase 1a, duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-41]
91. c5 ENSDARG00000021004 3536 3.057 - - - 0.755 0.716 - - 0.760 0.826 complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
92. slc2a2 ENSDARG00000056196 2061 3.051 - - 0.735 0.754 0.749 - - - 0.813 solute carrier family 2 (facilitated glucose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1213]
93. si:dkey-69o16.5 ENSDARG00000070057 3628 3.049 - - - 0.838 0.717 0.775 - - 0.719 si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
94. miox ENSDARG00000002764 588 3.034 - - 0.817 0.780 - - - 0.723 0.714 myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
95. HPX ENSDARG00000012609 781 3.027 - - 0.798 0.717 - - - 0.794 0.718 hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
96. masp2 ENSDARG00000007988 331 3.024 - - 0.738 - - 0.824 - 0.750 0.712 mannan-binding lectin serine peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060130-154]
97. npc2 ENSDARG00000090912 21929 2.951 - - 0.700 - 0.786 - - 0.704 0.761 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
98. serpina1 ENSDARG00000090286 8108 2.703 - - 0.905 - - 0.948 - - 0.850 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
99. C3_2 C3_2 1084 2.608 - - 0.854 - - 0.927 - - 0.827
100. hrsp12 3981 2.577 - - 0.751 - - - 0.976 0.850 - heat-responsive protein 12, transcript variant 1

There are 1013 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA