Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rnaseh2b

Gene Name Gene ID Reads Annotation
rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]










Genes with expression patterns similar to rnaseh2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
2. scrn2 ENSDARG00000043497 204 1.645 - - - 0.744 - - 0.901 - - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
3. phf8 ENSDARG00000006584 476 1.633 - - - 0.893 - - 0.740 - - PHD finger protein 8 [Source:ZFIN;Acc:ZDB-GENE-060419-1]
4. polr2i ENSDARG00000040443, ENSDARG00000110652 879 1.625 - - - 0.791 - - 0.834 - - polymerase (RNA) II (DNA directed) polypeptide I [Source:ZFIN;Acc:ZDB-GENE-041010-106]
5. WDSUB1 ENSDARG00000090418 357 1.601 - 0.772 - - - - 0.829 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
6. CU683898.1 CU683898.1 203 1.58 - - - 0.813 - - 0.767 - -
7. GPR89A ENSDARG00000077983 463 1.571 - 0.819 - - - - 0.752 - - G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
8. zgc:194621 ENSDARG00000074696 85 1.567 - - - 0.823 - 0.744 - - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
9. FP236789.1 ENSDARG00000105406 57 1.566 - 0.738 - - - - 0.828 - -
10. slc3a1 ENSDARG00000017165 136 1.558 - - - - - 0.794 0.764 - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
11. BUD13 BUD13 594 1.554 - - - 0.766 - - 0.788 - -
12. AL929322.1 AL929322.1 300 1.547 - 0.838 - - - - 0.709 - -
13. CASKIN1 ENSDARG00000046107 201 1.536 - 0.813 - 0.723 - - - - - CASK interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-071115-3]
14. camk4 ENSDARG00000005372 118 1.534 - - - 0.750 - - 0.784 - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
15. cygb1 ENSDARG00000099371 63 1.534 - 0.797 - 0.737 - - - - - cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
16. ZPLXDC2 ZPLXDC2 1298 1.533 0.740 - - 0.793 - - - - -
17. ZNF208 ZNF208 121 1.522 - 0.759 - - - - 0.763 - -
18. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 1.516 - - - 0.747 - - 0.769 - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
19. lin28a ENSDARG00000016999 723 1.506 - 0.748 - - - - 0.758 - - lin-28 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-747]
20. si:dkey-97l20.5 si:dkey-97l20.5 33 1.499 - - - 0.779 - - 0.720 - -
21. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 1.499 - 0.700 - - - - 0.799 - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
22. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.489 - - - 0.731 - - 0.758 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
23. tbl3 ENSDARG00000052344 1530 1.473 - - - 0.743 - - 0.730 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
24. cdk6 ENSDARG00000070228 1778 1.471 - - - 0.734 - - 0.737 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
25. heca ENSDARG00000042877 200 1.469 - 0.758 - - - - - 0.711 - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
26. haus1 ENSDARG00000058968 1336 1.459 - 0.751 - 0.708 - - - - - HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
27. im:7154842 im:7154842 434 1.457 - 0.702 - - - - 0.755 - -
28. nab1b ENSDARG00000040700 289 1.439 - - - 0.727 - - 0.712 - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
29. RNASEH2C ENSDARG00000089637 1673 1.437 - 0.708 - - - - 0.729 - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
30. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.434 - 0.724 - - 0.710 - - - - PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
31. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 1.433 0.719 - - - - - 0.714 - - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
32. rpgra ENSDARG00000056617 77 1.433 - 0.704 - - - 0.729 - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
33. meis3 ENSDARG00000002795 2509 0.943 - - - - - - 0.943 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
34. lrrc23 ENSDARG00000006174 234 0.931 - - - - - - 0.931 - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
35. pcnxl2 610 0.906 - - - - - - 0.906 - - pecanex-like 2 (Drosophila), transcript variant X2
36. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.904 - 0.904 - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
37. pigp ENSDARG00000038805 611 0.899 - - - 0.899 - - - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
38. dixdc1b ENSDARG00000056267 307 0.895 - - - - - - 0.895 - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
39. mcm10 ENSDARG00000045815 196 0.894 - - - 0.894 - - - - - minichromosome maintenance 10 replication initiation factor [Source:ZFIN;Acc:ZDB-GENE-041210-42]
40. nxph2a ENSDARG00000063224 75 0.891 - - - - - - 0.891 - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
41. klfd klfd 625 0.888 - - - - - 0.888 - - -
42. CAMSAP3 ENSDARG00000059475 263 0.887 - 0.887 - - - - - - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
43. FHDC1_2 FHDC1_2 133 0.887 - 0.887 - - - - - - -
44. prpsap2 ENSDARG00000019326 1463 0.887 - - - - - - 0.887 - - phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
45. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 0.883 - - - - - - 0.883 - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
46. pus3 ENSDARG00000028976 52 0.882 - - - - - - 0.882 - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
47. ENTHD1 ENTHD1 235 0.882 - 0.882 - - - - - - -
48. tcf19l ENSDARG00000040036 369 0.881 - - - - - - 0.881 - - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
49. PEG3_40 PEG3_40 186 0.879 - - - - - - 0.879 - -
50. crlf1a ENSDARG00000024365 222 0.878 - 0.878 - - - - - - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]
51. SPTBN4_1 ENSDARG00000092624 473 0.874 - 0.874 - - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
52. nsmfa ENSDARG00000060025 70 0.873 - 0.873 - - - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
53. dynlt1 ENSDARG00000045909 2451 0.872 - - - - - - 0.872 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
54. smc5 ENSDARG00000044282 779 0.87 - - - 0.870 - - - - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
55. kcnip1a 101 0.868 - - - - - - 0.868 - - Kv channel interacting protein 1 a
56. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 0.868 - - - - - - 0.868 - - Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
57. si:dkey-238m4.1 si:dkey-238m4.1 71 0.867 - 0.867 - - - - - - -
58. phpt1 ENSDARG00000045567 211 0.865 - 0.865 - - - - - - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
59. CU856207.1 CU856207.1 87 0.865 - - - - - 0.865 - - -
60. CR376787.1 CR376787.1 10 0.865 - - - - - 0.865 - - -
61. foxred1 ENSDARG00000099705 217 0.863 - - - - - - 0.863 - - FAD-dependent oxidoreductase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080204-64]
62. hoxa2b ENSDARG00000023031 706 0.861 - 0.861 - - - - - - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
63. tbc1d2b ENSDARG00000061986 247 0.859 - - - 0.859 - - - - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
64. si:dkey-32e6.3 ENSDARG00000092934 133 0.857 - 0.857 - - - - - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
65. tmem209 ENSDARG00000039340 1598 0.857 - - - 0.857 - - - - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
66. si:dkey-263m6.1 si:dkey-263m6.1 140 0.856 - 0.856 - - - - - - -
67. cep135 ENSDARG00000002991 164 0.854 - - - - - - 0.854 - - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
68. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 0.852 - - - - - - 0.852 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
69. kif23 ENSDARG00000014943, ENSDARG00000116561 845 0.852 - - - - - - 0.852 - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
70. nprl3 ENSDARG00000010918 339 0.85 - - - - - - 0.850 - - NPR3-like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-1348]
71. icln icln 1279 0.849 - - - 0.849 - - - - -
72. b4galt2 ENSDARG00000077994 480 0.847 - - - - - - 0.847 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
73. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 0.846 - - - - - - 0.846 - - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
74. trps1 ENSDARG00000104082 918 0.845 - - - - - - 0.845 - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
75. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 0.844 - 0.844 - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
76. LRFN2 118 0.844 - 0.844 - - - - - - - leucine rich repeat and fibronectin type III domain containing 2
77. SNORA7 SNORA7 100 0.844 - - - - - - 0.844 - -
78. mettl14 ENSDARG00000070278, ENSDARG00000112383 278 0.843 - - - 0.843 - - - - - methyltransferase like 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2328]
79. CNTLN ENSDARG00000033345 128 0.843 - - - 0.843 - - - - - centlein, centrosomal protein [Source:ZFIN;Acc:ZDB-GENE-090313-409]
80. SNCAIP ENSDARG00000100198 522 0.842 - - - - - - 0.842 - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
81. insm1a ENSDARG00000091756 1838 0.842 - 0.842 - - - - - - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
82. wu:fb30e12 wu:fb30e12 1254 0.841 - - - - - - 0.841 - -
83. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 0.841 - - - - - - 0.841 - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
84. zswim5 ENSDARG00000055900 4243 0.839 - - - - - - 0.839 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
85. PMFBP1 ENSDARG00000101917 292 0.839 - - - - - - 0.839 - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
86. ubp1 ENSDARG00000018000 1047 0.839 - - - - - - 0.839 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
87. gas2l3 ENSDARG00000045880 614 0.839 - - - 0.839 - - - - - growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
88. dffa ENSDARG00000055770 294 0.838 - - - - - - 0.838 - - DNA fragmentation factor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040718-376]
89. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 0.837 - - - - - - 0.837 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
90. wfikkn2a ENSDARG00000013460 859 0.837 - - - - - - 0.837 - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
91. acana ENSDARG00000035891 118 0.837 - 0.837 - - - - - - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
92. GPR17 ENSDARG00000062030 713 0.836 - - - - - - 0.836 - - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
93. BX530018.2 ENSDARG00000056677 83 0.836 - 0.836 - - - - - - - OCIA domain-containing protein 1-like [Source:NCBI gene;Acc:553528]
94. usp46 ENSDARG00000045343 65 0.836 - 0.836 - - - - - - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
95. crsp7 ENSDARG00000105102 1169 0.835 - 0.835 - - - - - - - cofactor required for Sp1 transcriptional activation, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2005]
96. ptprna ENSDARG00000058646 1327 0.835 - 0.835 - - - - - - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
97. atl1 ENSDARG00000060481 251 0.835 - - - - - - 0.835 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
98. mettl21d mettl21d 94 0.834 - - - 0.834 - - - - -
99. supv3l1 ENSDARG00000077728, ENSDARG00000111098 173 0.833 - - - - - 0.833 - - - SUV3-like helicase [Source:ZFIN;Acc:ZDB-GENE-030131-2838]
100. prmt10 prmt10 312 0.833 - 0.833 - - - - - - -

There are 858 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA