Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rnaseh1

Gene Name Gene ID Reads Annotation
rnaseh1 ENSDARG00000042571 922 ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]










Genes with expression patterns similar to rnaseh1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rnaseh1 ENSDARG00000042571 922 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
2. mrpl11 ENSDARG00000013075 2927 1.78 - - - - 0.993 0.787 - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
3. arfgef2 ENSDARG00000074702 1593 1.765 - - - - 0.992 - 0.773 - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
4. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.726 - - - - 0.976 - 0.750 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
5. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.717 - - - - 0.958 - 0.759 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
6. si:ch73-131e21.5 si:ch73-131e21.5 1895 1.714 - - - - 0.965 - - 0.749 -
7. tnrc6b ENSDARG00000074161 4597 1.71 - - - - 0.882 - 0.828 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
8. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.71 - - - - 0.990 - 0.720 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
9. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.71 - - - - 0.992 - 0.718 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
10. arhgap11a ENSDARG00000100019 1642 1.703 - - - - 0.992 - 0.711 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
11. cdk5 ENSDARG00000056683 1998 1.702 - - - - 0.996 - 0.706 - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
12. sf1 ENSDARG00000008188 5142 1.657 - - - - 0.953 - 0.704 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
13. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.633 0.700 - - - 0.933 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
14. DHRS13 DHRS13 218 1.586 - 0.721 - - - - - 0.865 -
15. bmp1a ENSDARG00000028071 583 1.562 - 0.747 - - - - 0.815 - - bone morphogenetic protein 1a [Source:ZFIN;Acc:ZDB-GENE-060818-1]
16. vrk2 ENSDARG00000021547 45 1.49 - - 0.767 - - 0.723 - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
17. skia ENSDARG00000042151 1850 1.49 - - 0.741 - - - 0.749 - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
18. zgc:162200 ENSDARG00000079934 1225 1.488 - - 0.766 - - - 0.722 - - zgc:162200 [Source:ZFIN;Acc:ZDB-GENE-030131-2989]
19. mych ENSDARG00000077473 911 1.486 - - 0.713 - - 0.773 - - - myelocytomatosis oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030219-51]
20. CR855307.1 ENSDARG00000099628 338 1.478 - - - - - 0.706 - 0.772 -
21. ankrd1b ENSDARG00000076192 204 1.474 - - 0.772 - - 0.702 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
22. nop58 ENSDARG00000104353 8497 1.439 0.711 - - - - 0.728 - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
23. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.429 0.714 - - - - 0.715 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
24. CABZ01027552.1 CABZ01027552.1 760 0.998 - - - - 0.998 - - - -
25. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.997 - - - - 0.997 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
26. adcyap1b ENSDARG00000027740 1539 0.997 - - - - 0.997 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
27. ccdc53 982 0.997 - - - - 0.997 - - - - coiled-coil domain containing 53
28. si:dkey-251i10.2 ENSDARG00000093957 4424 0.997 - - - - 0.997 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
29. il12rb2l ENSDARG00000074850 407 0.997 - - - - 0.997 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
30. SNORA70 SNORA70 511 0.997 - - - - 0.997 - - - -
31. tarsl2 ENSDARG00000092774 505 0.997 - - - - 0.997 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
32. USP2_1 USP2_1 544 0.997 - - - - 0.997 - - - -
33. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.997 - - - - 0.997 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
34. sh3bp5a ENSDARG00000100529 642 0.997 - - - - 0.997 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
35. atp1b4 ENSDARG00000053262 1337 0.997 - - - - 0.997 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
36. otx2 766 0.997 - - - - 0.997 - - - - orthodenticle homeobox 2, transcript variant X2
37. armc9 ENSDARG00000087299 459 0.997 - - - - 0.997 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
38. ticrr ENSDARG00000045605 739 0.996 - - - - 0.996 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
39. cdkn1a ENSDARG00000076554 591 0.996 - - - - 0.996 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
40. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 0.996 - - - - 0.996 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
41. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.996 - - - - 0.996 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
42. cog4 ENSDARG00000054264 785 0.996 - - - - 0.996 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
43. ESCO1 ENSDARG00000077057 1112 0.996 - - - - 0.996 - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
44. rbpja ENSDARG00000003398 1309 0.996 - - - - 0.996 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
45. clasp1a ENSDARG00000010280 1158 0.996 - - - - 0.996 - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
46. WIPF3 WIPF3 804 0.996 - - - - 0.996 - - - -
47. eif3d ENSDARG00000021257 1524 0.995 - - - - 0.995 - - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
48. slc20a1b ENSDARG00000010641 2564 0.995 - - - - 0.995 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
49. ttc13 ENSDARG00000063242 1360 0.995 - - - - 0.995 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
50. zgc:110699 ENSDARG00000017474 381 0.995 - - - - 0.995 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
51. pik3r3a ENSDARG00000103038 1132 0.995 - - - - 0.995 - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
52. wu:fc26g07 wu:fc26g07 1165 0.995 - - - - 0.995 - - - -
53. nmt1a ENSDARG00000052966 5918 0.995 - - - - 0.995 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
54. USP24 ENSDARG00000059925 1294 0.995 - - - - 0.995 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
55. AP3B1 2363 0.995 - - - - 0.995 - - - - adaptor related protein complex 3 beta 1 subunit
56. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 0.995 - - - - 0.995 - - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
57. esf1 ENSDARG00000008740 1206 0.994 - - - - 0.994 - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
58. usp40 ENSDARG00000071197 825 0.994 - - - - 0.994 - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
59. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.994 - - - - 0.994 - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
60. nsl1 ENSDARG00000024471 1269 0.994 - - - - 0.994 - - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
61. prrc1 ENSDARG00000044304 1567 0.994 - - - - 0.994 - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
62. znf280d ENSDARG00000077013 1387 0.994 - - - - 0.994 - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
63. itm2ca ENSDARG00000043448 1265 0.994 - - - - 0.994 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
64. gab1 ENSDARG00000037018 1489 0.994 - - - - 0.994 - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
65. col11a1b ENSDARG00000009014 9998 0.994 - - - - 0.994 - - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
66. mafk ENSDARG00000100947 1460 0.994 - - - - 0.994 - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
67. sap130b ENSDARG00000079352 1468 0.994 - - - - 0.994 - - - - Sin3A-associated protein b [Source:ZFIN;Acc:ZDB-GENE-070912-570]
68. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 0.994 - - - - 0.994 - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
69. cuedc1b ENSDARG00000054748 1638 0.994 - - - - 0.994 - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
70. si:ch211-197h24.6 ENSDARG00000091631 1933 0.993 - - - - 0.993 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
71. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.993 - - - - 0.993 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
72. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 0.993 - - - - 0.993 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
73. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.993 - - - - 0.993 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
74. sf3b3_1 ENSDARG00000103553 1191 0.993 - - - - 0.993 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
75. pik3cb ENSDARG00000075253 2075 0.992 - - - - 0.992 - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
76. clgn ENSDARG00000009315 993 0.992 - - - - 0.992 - - - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
77. mtor ENSDARG00000053196 2156 0.992 - - - - 0.992 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
78. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 0.992 - - - - 0.992 - - - - MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
79. ANKRD50 ENSDARG00000045666 1756 0.992 - - - - 0.992 - - - - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
80. thoc7 ENSDARG00000015394 3824 0.992 - - - - 0.992 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
81. kdm6bb ENSDARG00000056929 4807 0.992 - - - - 0.992 - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
82. prickle3 ENSDARG00000073996 840 0.992 - - - - 0.992 - - - - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
83. ipo4 ENSDARG00000041493 1578 0.992 - - - - 0.992 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
84. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 0.991 - - - - 0.991 - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
85. ARHGEF5 2727 0.991 - - - - 0.991 - - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
86. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.99 - - - - 0.990 - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
87. pcif1 ENSDARG00000099084 2851 0.99 - - - - 0.990 - - - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
88. nsfl1c ENSDARG00000087640 2226 0.99 - - - - 0.990 - - - - NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
89. CT955967.1 ENSDARG00000099956 2885 0.99 - - - - 0.990 - - - -
90. lama4 ENSDARG00000020785 1522 0.99 - - - - 0.990 - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
91. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.989 - - - - 0.989 - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
92. suv420h2 2186 0.989 - - - - 0.989 - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
93. sh3bgrl3 ENSDARG00000098075 3071 0.989 - - - - 0.989 - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
94. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 0.988 - - - - 0.988 - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
95. arcn1b ENSDARG00000031214 4529 0.988 - - - - 0.988 - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
96. CABZ01055343.2 CABZ01055343.2 10312 0.988 - - - - 0.988 - - - -
97. arf6b ENSDARG00000052928 4585 0.987 - - - - 0.987 - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
98. eng2b eng2b 865 0.987 - - - - 0.987 - - - -
99. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 0.986 - - - - 0.986 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
100. papss2b ENSDARG00000056600 2872 0.986 - - - - 0.986 - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2b [Source:ZFIN;Acc:ZDB-GENE-010323-5]

There are 863 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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