Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rn7sk

Gene Name Gene ID Reads Annotation
rn7sk ENSDARG00000081270 149 RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]










Genes with expression patterns similar to rn7sk

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rn7sk ENSDARG00000081270 149 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]
2. COL19A1 ENSDARG00000076163, ENSDARG00000096073 12 1.725 - 0.927 - - - 0.798 - - - collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
3. CEP152 ENSDARG00000075725 391 1.714 - 0.964 0.750 - - - - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
4. nt5c1ba ENSDARG00000018153 31 1.68 - 0.919 - - - 0.761 - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
5. kctd7 ENSDARG00000061580 44 1.669 - 0.867 - - - - - - 0.802 potassium channel tetramerization domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060804-2]
6. gb:ai877918 ENSDARG00000100179 173 1.668 - 0.861 - - - - 0.807 - - expressed sequence AI877918 [Source:ZFIN;Acc:ZDB-GENE-090506-8]
7. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 1.668 - 0.948 - - - - - - 0.720 kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
8. zgc:171673 ENSDARG00000102473 256 1.662 - - - 0.759 - - 0.903 - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
9. rab20 ENSDARG00000005049 346 1.654 - 0.932 0.722 - - - - - - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
10. cbx8a ENSDARG00000087327 361 1.652 0.713 0.939 - - - - - - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
11. ppfia4 ENSDARG00000053205 276 1.651 - 0.920 - - - 0.731 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
12. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.643 - 0.869 - - - - - - 0.774 asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
13. trim44 ENSDARG00000051761 509 1.639 - 0.872 0.767 - - - - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
14. CCDC138 CCDC138 73 1.635 - 0.849 0.786 - - - - - -
15. CABZ01068153.1 CABZ01068153.1 211 1.631 - 0.918 - 0.713 - - - - -
16. CABZ01048956.1 ENSDARG00000117474 253 1.626 - 0.841 - - - - - - 0.785 probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
17. mbip ENSDARG00000019364 238 1.622 0.735 0.887 - - - - - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
18. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.601 - - 0.851 - - 0.750 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
19. hinfp ENSDARG00000004851 273 1.565 0.723 0.842 - - - - - - - histone H4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2764]
20. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.562 0.742 0.820 - - - - - - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
21. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 1.548 - 0.787 - - - - 0.761 - - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
22. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 1.539 - 0.804 - - - - - - 0.735 Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
23. si:ch73-211l2.1 605 1.531 - 0.765 - - - - - - 0.766 si:ch73-211l2.1
24. srxn1 ENSDARG00000079160 265 1.526 - 0.724 0.802 - - - - - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
25. zgc:101566 ENSDARG00000086342 363 1.516 - 0.752 - - - - - - 0.764 zgc:101566 [Source:ZFIN;Acc:ZDB-GENE-041010-73]
26. mul1b ENSDARG00000052527 431 1.515 - 0.720 - - - - - - 0.795 mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
27. odf3l2 36 1.514 - - 0.802 - - - 0.712 - - outer dense fiber of sperm tails 3-like 2
28. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.503 - 0.801 - - - 0.702 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
29. rapgef5a ENSDARG00000075271 282 1.499 - - 0.720 - - - - - 0.779 Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
30. BX470149.1 BX470149.1 235 1.499 - 0.790 - - - 0.709 - - -
31. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.492 - - 0.763 - - 0.729 - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
32. gadd45bb ENSDARG00000013576 331 1.491 - - - - - - 0.759 - 0.732 growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
33. PIGW ENSDARG00000079244 118 1.49 - - 0.757 - - - - - 0.733 phosphatidylinositol glycan anchor biosynthesis, class W [Source:ZFIN;Acc:ZDB-GENE-080204-94]
34. phf8 ENSDARG00000006584 476 1.483 - 0.775 - - - 0.708 - - - PHD finger protein 8 [Source:ZFIN;Acc:ZDB-GENE-060419-1]
35. wdr16 wdr16 532 1.476 - 0.728 - - - - 0.748 - -
36. hrasb ENSDARG00000005651 662 1.474 - 0.725 - - - 0.749 - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
37. prdm14 ENSDARG00000045371 106 1.473 - - - 0.718 - 0.755 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
38. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 1.471 - - - - - - 0.724 - 0.747 si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
39. MED8 ENSDARG00000114425 459 1.464 - 0.757 - - - - - - 0.707 mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
40. uggt2 ENSDARG00000062089 661 1.456 - - - 0.725 - - 0.731 - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050517-21]
41. NUP54 ENSDARG00000103296 433 1.445 - 0.731 0.714 - - - - - - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
42. trmu ENSDARG00000043734 291 1.442 - 0.724 - - - - - - 0.718 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-540]
43. BX664622.1 ENSDARG00000101754 39 1.44 - 0.714 - - - - 0.726 - -
44. CCDC108 CCDC108 74 1.439 - - 0.725 0.714 - - - - -
45. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.431 0.701 - - - - - - - 0.730 potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
46. CSPP1 68 1.419 - - - 0.710 - - 0.709 - - centrosome and spindle pole associated protein 1, transcript variant X6
47. fam105ba fam105ba 93 0.984 - - - - - - 0.984 - -
48. TMTC2 TMTC2 478 0.969 - 0.969 - - - - - - -
49. FP236513.2 FP236513.2 443 0.967 - 0.967 - - - - - - -
50. im:7160159 im:7160159 294 0.966 - 0.966 - - - - - - -
51. gpat2 ENSDARG00000053575 12 0.961 - - - - - - 0.961 - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
52. uox ENSDARG00000007024 205 0.955 - 0.955 - - - - - - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
53. sft2d3 ENSDARG00000070284 351 0.952 - 0.952 - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
54. insb ENSDARG00000034610, ENSDARG00000112105 60 0.95 - 0.950 - - - - - - - preproinsulin b [Source:ZFIN;Acc:ZDB-GENE-040113-2]
55. ITGAE ITGAE 53 0.95 - 0.950 - - - - - - -
56. tbpl2 ENSDARG00000097302 70 0.949 - 0.949 - - - - - - - TATA box binding protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040520-3]
57. si:dkey-24i24.3 ENSDARG00000088452 27 0.948 - 0.948 - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
58. mbnl3 ENSDARG00000016085 6 0.948 - 0.948 - - - - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
59. zgc:174708 zgc:174708 11 0.948 - 0.948 - - - - - - -
60. si:ch211-253b18.3 si:ch211-253b18.3 4 0.948 - 0.948 - - - - - - -
61. CR812472.2 ENSDARG00000097380 62 0.948 - 0.948 - - - - - - -
62. RPS6KL1 ENSDARG00000079024 22 0.948 - 0.948 - - - - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
63. hoxa13b ENSDARG00000036254 404 0.948 - 0.948 - - - - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
64. nrxn3a ENSDARG00000043746 54 0.948 - 0.948 - - - - - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
65. si:ch211-173m16.1 si:ch211-173m16.1 3 0.948 - 0.948 - - - - - - -
66. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.948 - 0.948 - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
67. C2CD3 ENSDARG00000074137 51 0.948 - 0.948 - - - - - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
68. CU929356.4 CU929356.4 86 0.948 - 0.948 - - - - - - -
69. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.948 - 0.948 - - - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
70. cd74b ENSDARG00000036628 8 0.948 - 0.948 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
71. SNORD18_1 SNORD18_1 5 0.948 - 0.948 - - - - - - -
72. pbx3b ENSDARG00000013615, ENSDARG00000110194 11 0.948 - 0.948 - - - - - - - pre-B-cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-000405-3]
73. CABZ01021426.1 CABZ01021426.1 25 0.948 - 0.948 - - - - - - -
74. iqsec3b ENSDARG00000093091 10 0.948 - 0.948 - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
75. s100s ENSDARG00000036773 90 0.948 - 0.948 - - - - - - - S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
76. gabra5 ENSDARG00000070730 156 0.948 - 0.948 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
77. LRRC2 LRRC2 23 0.948 - 0.948 - - - - - - -
78. TSPAN17 ENSDARG00000114067 3 0.948 - 0.948 - - - - - - - tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-3673]
79. prkchb ENSDARG00000043243 126 0.948 - 0.948 - - - - - - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
80. cyp3a65 ENSDARG00000103295 7 0.948 - 0.948 - - - - - - - cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
81. pygl ENSDARG00000002197 192 0.948 - 0.948 - - - - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
82. arvcfa ENSDARG00000074329 53 0.948 - 0.948 - - - - - - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
83. CABZ01112215.2 CABZ01112215.2 11 0.948 - 0.948 - - - - - - -
84. KHNYN ENSDARG00000092488 10 0.948 - 0.948 - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
85. ttc39a ENSDARG00000074126 7 0.948 - 0.948 - - - - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
86. slc12a8 ENSDARG00000074384 12 0.948 - 0.948 - - - - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
87. grtp1b ENSDARG00000030269 24 0.948 - 0.948 - - - - - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
88. si:dkey-46g23.3 si:dkey-46g23.3 16 0.948 - 0.948 - - - - - - -
89. si:dkey-17m8.2 ENSDARG00000035797 40 0.948 - 0.948 - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
90. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 0.948 - 0.948 - - - - - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
91. mecom ENSDARG00000060808 8 0.948 - 0.948 - - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
92. CABZ01063077.1 CABZ01063077.1 22 0.948 - 0.948 - - - - - - -
93. si:ch211-191a6.3 si:ch211-191a6.3 6 0.948 - 0.948 - - - - - - -
94. TNFRSF14_8 TNFRSF14_8 6 0.948 - 0.948 - - - - - - -
95. si:ch211-134c9.2 ENSDARG00000095593 86 0.948 - 0.948 - - - - - - - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
96. antxr1a ENSDARG00000025672 32 0.948 - 0.948 - - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
97. si:ch211-224l10.4 ENSDARG00000088762 36 0.948 - 0.948 - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
98. pmt ENSDARG00000100482 228 0.948 - 0.948 - - - - - - - phosphoethanolamine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060929-740]
99. GPR158 GPR158 64 0.948 - 0.948 - - - - - - -
100. asic1b ENSDARG00000101866 61 0.948 - 0.948 - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]

There are 1134 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA